RNA–Protein interactions for RNA: ENST00000354679.3

HCFC1R1-202, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2 BASIC

Gene HCFC1R1, Length 765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-202ENST00000354679 SRCAPQ6ZRS2 3230 aa27.62■■■□□ 2.01
HCFC1R1-202ENST00000354679 PLSCR1O15162 318 aa27.61■■■□□ 2.01
HCFC1R1-202ENST00000354679 KCNQ2O43526 872 aa27.61■■■□□ 2.01
HCFC1R1-202ENST00000354679 RGPD3A6NKT7 1758 aaPredicted RBP27.6■■■□□ 2.01
HCFC1R1-202ENST00000354679 RGPD4Q7Z3J3 1758 aa27.6■■■□□ 2.01
HCFC1R1-202ENST00000354679 NCAPD2Q15021 1401 aa27.6■■■□□ 2.01
HCFC1R1-202ENST00000354679 SHANK3Q9BYB0 1731 aa27.59■■■□□ 2.01
HCFC1R1-202ENST00000354679 EIF4A2Q14240 407 aaKnown RBP27.59■■■□□ 2.01
HCFC1R1-202ENST00000354679 EYA1Q99502 592 aa27.59■■■□□ 2.01
HCFC1R1-202ENST00000354679 NUP188Q5SRE5 1749 aa27.58■■■□□ 2.01
HCFC1R1-202ENST00000354679 PSDA5PKW4 1024 aaPredicted RBP27.58■■■□□ 2.01
HCFC1R1-202ENST00000354679 CC2D1BQ5T0F9 858 aaKnown RBP27.55■■■□□ 2
HCFC1R1-202ENST00000354679 R3HDM1Q15032 1099 aaKnown RBP27.54■■■□□ 2
HCFC1R1-202ENST00000354679 KAT6BQ8WYB5 2073 aa27.54■■■□□ 2
HCFC1R1-202ENST00000354679 PCDH11XQ9BZA7 1347 aa27.53■■■□□ 2
HCFC1R1-202ENST00000354679 PCDH11YQ9BZA8 1340 aa27.53■■■□□ 2
HCFC1R1-202ENST00000354679 NPC1L1Q9UHC9 1359 aa27.52■■■□□ 2
HCFC1R1-202ENST00000354679 NBPF14Q5TI25 921 aa27.52■■■□□ 2
HCFC1R1-202ENST00000354679 BTAF1O14981 1849 aa27.51■■□□□ 1.99
HCFC1R1-202ENST00000354679 PROM2Q8N271 834 aa27.5■■□□□ 1.99
HCFC1R1-202ENST00000354679 PKD1L3Q7Z443 1732 aa27.5■■□□□ 1.99
HCFC1R1-202ENST00000354679 DOT1LQ8TEK3 1739 aa27.5■■□□□ 1.99
HCFC1R1-202ENST00000354679 IGSF1Q8N6C5 1336 aa27.49■■□□□ 1.99
HCFC1R1-202ENST00000354679 TXNRD1Q16881 649 aa27.48■■□□□ 1.99
HCFC1R1-202ENST00000354679 SYTL4Q96C24 671 aaPredicted RBP27.48■■□□□ 1.99
HCFC1R1-202ENST00000354679 PRIM1P49642 420 aaKnown RBP27.47■■□□□ 1.99
HCFC1R1-202ENST00000354679 CYP27B1O15528 508 aa27.46■■□□□ 1.99
HCFC1R1-202ENST00000354679 CNGB1Q14028 1251 aaPredicted RBP27.46■■□□□ 1.99
HCFC1R1-202ENST00000354679 SPG7Q9UQ90 795 aa27.46■■□□□ 1.99
HCFC1R1-202ENST00000354679 MTHFSP49914 203 aa27.45■■□□□ 1.98
HCFC1R1-202ENST00000354679 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.44■■□□□ 1.98
HCFC1R1-202ENST00000354679 ANO8Q9HCE9 1232 aaPredicted RBP27.43■■□□□ 1.98
HCFC1R1-202ENST00000354679 PLEKHG2Q9H7P9 1386 aa27.43■■□□□ 1.98
HCFC1R1-202ENST00000354679 IL13P35225 146 aa27.42■■□□□ 1.98
HCFC1R1-202ENST00000354679 AEBP1Q8IUX7 1158 aa27.39■■□□□ 1.98
HCFC1R1-202ENST00000354679 NKX1-1Q15270 411 aaPredicted RBP27.38■■□□□ 1.97
HCFC1R1-202ENST00000354679 LRP5O75197 1615 aa27.38■■□□□ 1.97
HCFC1R1-202ENST00000354679 IFNL2Q8IZJ0 200 aa27.37■■□□□ 1.97
HCFC1R1-202ENST00000354679 TOGARAM1Q9Y4F4 1720 aa27.36■■□□□ 1.97
HCFC1R1-202ENST00000354679 PHKG2P15735 406 aa27.36■■□□□ 1.97
HCFC1R1-202ENST00000354679 SULT6B1Q6IMI4 303 aa27.36■■□□□ 1.97
HCFC1R1-202ENST00000354679 STK32BQ9NY57 414 aa27.36■■□□□ 1.97
HCFC1R1-202ENST00000354679 KDRP35968 1356 aa27.35■■□□□ 1.97
HCFC1R1-202ENST00000354679 PLEKHO1Q53GL0 409 aaPredicted RBP27.34■■□□□ 1.97
HCFC1R1-202ENST00000354679 SLC27A3Q5K4L6 730 aa27.34■■□□□ 1.97
HCFC1R1-202ENST00000354679 LRRC4BQ9NT99 713 aa27.34■■□□□ 1.97
HCFC1R1-202ENST00000354679 DIAPH1O60610 1272 aaKnown RBP27.33■■□□□ 1.97
HCFC1R1-202ENST00000354679 SLC15A2Q16348 729 aa27.33■■□□□ 1.97
HCFC1R1-202ENST00000354679 MPRIPQ6WCQ1 1025 aa27.33■■□□□ 1.97
HCFC1R1-202ENST00000354679 PAPPAQ13219 1627 aa27.33■■□□□ 1.97
HCFC1R1-202ENST00000354679 AMOTQ4VCS5 1084 aa27.32■■□□□ 1.96
HCFC1R1-202ENST00000354679 LY75O60449 1722 aa27.31■■□□□ 1.96
HCFC1R1-202ENST00000354679 COL3A1P02461 1466 aaPredicted RBP27.31■■□□□ 1.96
HCFC1R1-202ENST00000354679 ITGB4P16144 1822 aa27.3■■□□□ 1.96
HCFC1R1-202ENST00000354679 ZNF530Q6P9A1 599 aaPredicted RBP27.3■■□□□ 1.96
HCFC1R1-202ENST00000354679 KCNQ4P56696 695 aa27.27■■□□□ 1.96
HCFC1R1-202ENST00000354679 PIGBQ92521 554 aa27.27■■□□□ 1.96
HCFC1R1-202ENST00000354679 CCNL1Q9UK58 526 aaPredicted RBP27.27■■□□□ 1.96
HCFC1R1-202ENST00000354679 CASZ1Q86V15 1759 aa27.27■■□□□ 1.96
HCFC1R1-202ENST00000354679 PALLDQ8WX93 1383 aa27.26■■□□□ 1.95
HCFC1R1-202ENST00000354679 HSP90AB1P08238 724 aaKnown RBP27.26■■□□□ 1.95
HCFC1R1-202ENST00000354679 HMOX1P09601 288 aa27.26■■□□□ 1.95
HCFC1R1-202ENST00000354679 ZNF827Q17R98 1081 aa27.26■■□□□ 1.95
HCFC1R1-202ENST00000354679 TMOD3Q9NYL9 352 aa27.26■■□□□ 1.95
HCFC1R1-202ENST00000354679 PPP2R1AP30153 589 aa27.24■■□□□ 1.95
HCFC1R1-202ENST00000354679 C1orf141Q5JVX7 400 aa27.24■■□□□ 1.95
HCFC1R1-202ENST00000354679 SMARCC1Q92922 1105 aaPredicted RBP27.24■■□□□ 1.95
HCFC1R1-202ENST00000354679 DCAF5Q96JK2 942 aa27.24■■□□□ 1.95
HCFC1R1-202ENST00000354679 PDGFDQ9GZP0 370 aaPredicted RBP27.24■■□□□ 1.95
HCFC1R1-202ENST00000354679 AKT1S1Q96B36 256 aa27.23■■□□□ 1.95
HCFC1R1-202ENST00000354679 CFAP53Q96M91 514 aa27.23■■□□□ 1.95
HCFC1R1-202ENST00000354679 U2SURPO15042 1029 aaKnown RBP27.22■■□□□ 1.95
HCFC1R1-202ENST00000354679 SPON1Q9HCB6 807 aa27.22■■□□□ 1.95
HCFC1R1-202ENST00000354679 ERVV-2B6SEH9 535 aa27.21■■□□□ 1.95
HCFC1R1-202ENST00000354679 ZEB1P37275 1124 aaPredicted RBP27.21■■□□□ 1.95
HCFC1R1-202ENST00000354679 KDM6AO15550 1401 aaPredicted RBP27.21■■□□□ 1.95
HCFC1R1-202ENST00000354679 ZBTB7AO95365 584 aa27.18■■□□□ 1.94
HCFC1R1-202ENST00000354679 ASAP1Q9ULH1 1129 aa27.17■■□□□ 1.94
HCFC1R1-202ENST00000354679 AKAP4Q5JQC9 854 aa27.16■■□□□ 1.94
HCFC1R1-202ENST00000354679 TFCP2L1Q9NZI6 479 aa27.16■■□□□ 1.94
HCFC1R1-202ENST00000354679 C5P01031 1676 aa27.15■■□□□ 1.94
HCFC1R1-202ENST00000354679 HMGB2P26583 209 aaKnown RBP27.15■■□□□ 1.94
HCFC1R1-202ENST00000354679 CABP4P57796 275 aa27.15■■□□□ 1.94
HCFC1R1-202ENST00000354679 DDX10Q13206 875 aaKnown RBP27.15■■□□□ 1.94
HCFC1R1-202ENST00000354679 QSER1Q2KHR3 1735 aa27.15■■□□□ 1.94
HCFC1R1-202ENST00000354679 MTHFSDQ2M296 383 aaKnown RBP27.14■■□□□ 1.94
HCFC1R1-202ENST00000354679 ATG3Q9NT62 314 aa27.14■■□□□ 1.94
HCFC1R1-202ENST00000354679 NUDCQ9Y266 331 aa27.14■■□□□ 1.94
HCFC1R1-202ENST00000354679 LOC102724428A0A0B4J2F2 783 aa27.13■■□□□ 1.93
HCFC1R1-202ENST00000354679 SIK1P57059 783 aa27.13■■□□□ 1.93
HCFC1R1-202ENST00000354679 TUBGCP6Q96RT7 1819 aa27.13■■□□□ 1.93
HCFC1R1-202ENST00000354679 PNPLA7Q6ZV29 1317 aa27.13■■□□□ 1.93
HCFC1R1-202ENST00000354679 MTFR1LQ9H019 292 aa27.12■■□□□ 1.93
HCFC1R1-202ENST00000354679 PPP1R1BQ9UD71 204 aaPredicted RBP27.12■■□□□ 1.93
HCFC1R1-202ENST00000354679 ATF5Q9Y2D1 282 aaPredicted RBP27.12■■□□□ 1.93
HCFC1R1-202ENST00000354679 TAF1LQ8IZX4 1826 aa27.11■■□□□ 1.93
HCFC1R1-202ENST00000354679 SCN11AQ9UI33 1791 aa27.1■■□□□ 1.93
HCFC1R1-202ENST00000354679 NFATC2IPQ8NCF5 419 aa27.08■■□□□ 1.93
HCFC1R1-202ENST00000354679 C4BP0C0L5 1744 aa27.07■■□□□ 1.92
HCFC1R1-202ENST00000354679 RNMTO43148 476 aaKnown RBP27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms