RNA–Protein interactions for RNA: ENST00000353855.6

DNMT3B-204, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 5 BASIC

Gene DNMT3B, Length 4,237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-204ENST00000353855 ZNF428Q96B54 188 aa16.92■□□□□ 0.3
DNMT3B-204ENST00000353855 RIOK3O14730 519 aaKnown RBP16.91■□□□□ 0.3
DNMT3B-204ENST00000353855 TFIP11Q9UBB9 837 aaKnown RBP16.91■□□□□ 0.3
DNMT3B-204ENST00000353855 F6X3S4 739 aa16.91■□□□□ 0.3
DNMT3B-204ENST00000353855 RNF20Q5VTR2 975 aa16.91■□□□□ 0.3
DNMT3B-204ENST00000353855 MIS18AQ9NYP9 233 aa16.91■□□□□ 0.3
DNMT3B-204ENST00000353855 CYP46A1Q9Y6A2 500 aa16.91■□□□□ 0.3
DNMT3B-204ENST00000353855 PDCP20941 246 aa16.91■□□□□ 0.3
DNMT3B-204ENST00000353855 CABP1Q9NZU7 370 aa16.91■□□□□ 0.3
DNMT3B-204ENST00000353855 COL17A1Q9UMD9 1497 aaPredicted RBP16.91■□□□□ 0.3
DNMT3B-204ENST00000353855 FCHSD2O94868 740 aa16.91■□□□□ 0.3
DNMT3B-204ENST00000353855 GNAI3P08754 354 aa16.91■□□□□ 0.3
DNMT3B-204ENST00000353855 NFE2L2Q16236 605 aa16.91■□□□□ 0.3
DNMT3B-204ENST00000353855 PDILTQ8N807 584 aa16.91■□□□□ 0.3
DNMT3B-204ENST00000353855 OTUD7AQ8TE49 926 aaPredicted RBP16.91■□□□□ 0.3
DNMT3B-204ENST00000353855 C9orf78Q9NZ63 289 aaPredicted RBP16.91■□□□□ 0.3
DNMT3B-204ENST00000353855 UHRF1BP1Q6BDS2 1440 aa16.91■□□□□ 0.3
DNMT3B-204ENST00000353855 ATP10BO94823 1461 aa16.9■□□□□ 0.3
DNMT3B-204ENST00000353855 KIF20AO95235 890 aa16.9■□□□□ 0.3
DNMT3B-204ENST00000353855 USP26Q9BXU7 913 aa16.9■□□□□ 0.3
DNMT3B-204ENST00000353855 PIK3C2GO75747 1445 aa16.9■□□□□ 0.3
DNMT3B-204ENST00000353855 MX1P20591 662 aa16.9■□□□□ 0.3
DNMT3B-204ENST00000353855 BCL2L12Q9HB09 334 aa16.9■□□□□ 0.3
DNMT3B-204ENST00000353855 CALCOCO1Q9P1Z2 691 aa16.9■□□□□ 0.3
DNMT3B-204ENST00000353855 DNMT1P26358 1616 aaKnown RBP16.9■□□□□ 0.3
DNMT3B-204ENST00000353855 PTGS1P23219 599 aa16.9■□□□□ 0.3
DNMT3B-204ENST00000353855 TRMT2AQ8IZ69 625 aaKnown RBP16.9■□□□□ 0.3
DNMT3B-204ENST00000353855 ZFP91Q96JP5 570 aaPredicted RBP16.9■□□□□ 0.3
DNMT3B-204ENST00000353855 TIGD1Q96MW7 591 aa16.9■□□□□ 0.3
DNMT3B-204ENST00000353855 STX6O43752 255 aa16.89■□□□□ 0.29
DNMT3B-204ENST00000353855 PIBF1Q8WXW3 757 aa16.89■□□□□ 0.29
DNMT3B-204ENST00000353855 UBE2HP62256 183 aa16.89■□□□□ 0.29
DNMT3B-204ENST00000353855 PLEKHM2Q8IWE5 1019 aa16.89■□□□□ 0.29
DNMT3B-204ENST00000353855 JARID2Q92833 1246 aaPredicted RBP16.89■□□□□ 0.29
DNMT3B-204ENST00000353855 PDRG1Q9NUG6 133 aa16.89■□□□□ 0.29
DNMT3B-204ENST00000353855 CWC15Q9P013 229 aaKnown RBP16.89■□□□□ 0.29
DNMT3B-204ENST00000353855 GPT2Q8TD30 523 aa16.89■□□□□ 0.29
DNMT3B-204ENST00000353855 SULT6B1Q6IMI4 303 aa16.88■□□□□ 0.29
DNMT3B-204ENST00000353855 UBXN4Q92575 508 aa16.88■□□□□ 0.29
DNMT3B-204ENST00000353855 SCAF11Q99590 1463 aaKnown RBP16.88■□□□□ 0.29
DNMT3B-204ENST00000353855 KRT222Q8N1A0 295 aa16.88■□□□□ 0.29
DNMT3B-204ENST00000353855 KIF18AQ8NI77 898 aa16.88■□□□□ 0.29
DNMT3B-204ENST00000353855 ADAMTS12P58397 1594 aa16.88■□□□□ 0.29
DNMT3B-204ENST00000353855 KIAA0556O60303 1618 aa16.88■□□□□ 0.29
DNMT3B-204ENST00000353855 GADD45BO75293 160 aaPredicted RBP16.88■□□□□ 0.29
DNMT3B-204ENST00000353855 TTLL5Q6EMB2 1281 aa16.88■□□□□ 0.29
DNMT3B-204ENST00000353855 TSPYL6Q8N831 410 aa16.88■□□□□ 0.29
DNMT3B-204ENST00000353855 PRAM1Q96QH2 718 aa16.88■□□□□ 0.29
DNMT3B-204ENST00000353855 NAT10Q9H0A0 1025 aaKnown RBP16.88■□□□□ 0.29
DNMT3B-204ENST00000353855 RRS1Q15050 365 aaKnown RBP16.87■□□□□ 0.29
DNMT3B-204ENST00000353855 ABCA5Q8WWZ7 1642 aa16.86■□□□□ 0.29
DNMT3B-204ENST00000353855 FAM83GA6ND36 823 aa16.86■□□□□ 0.29
DNMT3B-204ENST00000353855 HDGFP51858 240 aaKnown RBP16.86■□□□□ 0.29
DNMT3B-204ENST00000353855 HSP90B2PQ58FF3 399 aa16.86■□□□□ 0.29
DNMT3B-204ENST00000353855 NOM1Q5C9Z4 860 aaKnown RBP16.86■□□□□ 0.29
DNMT3B-204ENST00000353855 CEP135Q66GS9 1140 aa16.86■□□□□ 0.29
DNMT3B-204ENST00000353855 CLASRPQ8N2M8 674 aaKnown RBP16.86■□□□□ 0.29
DNMT3B-204ENST00000353855 ZBTB9Q96C00 473 aa16.86■□□□□ 0.29
DNMT3B-204ENST00000353855 ZNF165P49910 485 aa16.86■□□□□ 0.29
DNMT3B-204ENST00000353855 KDM4AO75164 1064 aa16.85■□□□□ 0.29
DNMT3B-204ENST00000353855 TMCO3Q6UWJ1 677 aa16.85■□□□□ 0.29
DNMT3B-204ENST00000353855 DDX11Q96FC9 970 aa16.85■□□□□ 0.29
DNMT3B-204ENST00000353855 SPG7Q9UQ90 795 aa16.85■□□□□ 0.29
DNMT3B-204ENST00000353855 POLR3AO14802 1390 aaPredicted RBP16.85■□□□□ 0.29
DNMT3B-204ENST00000353855 PES1O00541 588 aaKnown RBP16.85■□□□□ 0.29
DNMT3B-204ENST00000353855 MCM10Q7L590 875 aa16.85■□□□□ 0.29
DNMT3B-204ENST00000353855 KDM5BQ9UGL1 1544 aa16.85■□□□□ 0.29
DNMT3B-204ENST00000353855 ME1P48163 572 aa16.85■□□□□ 0.29
DNMT3B-204ENST00000353855 MEIS3Q99687 375 aa16.85■□□□□ 0.29
DNMT3B-204ENST00000353855 NOL10Q9BSC4 688 aaKnown RBP16.85■□□□□ 0.29
DNMT3B-204ENST00000353855 GCC2Q8IWJ2 1684 aa16.85■□□□□ 0.29
DNMT3B-204ENST00000353855 ABCC11Q96J66 1382 aa16.85■□□□□ 0.29
DNMT3B-204ENST00000353855 DNM1Q05193 864 aaKnown RBP16.85■□□□□ 0.29
DNMT3B-204ENST00000353855 DMTNQ08495 405 aa16.85■□□□□ 0.29
DNMT3B-204ENST00000353855 PRPF40BQ6NWY9 871 aaKnown RBP16.85■□□□□ 0.29
DNMT3B-204ENST00000353855 FSD1Q9BTV5 496 aa16.85■□□□□ 0.29
DNMT3B-204ENST00000353855 MBIPQ9NS73 344 aa16.85■□□□□ 0.29
DNMT3B-204ENST00000353855 LIMCH1Q9UPQ0 1083 aa16.85■□□□□ 0.29
DNMT3B-204ENST00000353855 DISP1Q96F81 1524 aa16.84■□□□□ 0.29
DNMT3B-204ENST00000353855 ITSN2Q9NZM3 1697 aa16.84■□□□□ 0.29
DNMT3B-204ENST00000353855 PSMA5P28066 241 aa16.84■□□□□ 0.29
DNMT3B-204ENST00000353855 LEKR1Q6ZMV7 388 aa16.84■□□□□ 0.29
DNMT3B-204ENST00000353855 GJB2P29033 226 aa16.84■□□□□ 0.29
DNMT3B-204ENST00000353855 ZSCAN22P10073 491 aaPredicted RBP16.84■□□□□ 0.29
DNMT3B-204ENST00000353855 ZBTB7BO15156 539 aaPredicted RBP16.83■□□□□ 0.29
DNMT3B-204ENST00000353855 INSRP06213 1382 aa16.83■□□□□ 0.29
DNMT3B-204ENST00000353855 CCT4P50991 539 aaKnown RBP16.83■□□□□ 0.28
DNMT3B-204ENST00000353855 OGFRQ9NZT2 677 aa16.83■□□□□ 0.28
DNMT3B-204ENST00000353855 ATAD2Q6PL18 1390 aa16.83■□□□□ 0.28
DNMT3B-204ENST00000353855 URI1O94763 535 aaPredicted RBP16.82■□□□□ 0.28
DNMT3B-204ENST00000353855 AK7Q96M32 723 aa16.82■□□□□ 0.28
DNMT3B-204ENST00000353855 FAM135AQ9P2D6 1515 aa16.82■□□□□ 0.28
DNMT3B-204ENST00000353855 ARHGEF12Q9NZN5 1544 aa16.82■□□□□ 0.28
DNMT3B-204ENST00000353855 G3BP1Q13283 466 aaKnown RBP eCLIP16.82■□□□□ 0.28
DNMT3B-204ENST00000353855 LUZP1Q86V48 1076 aa16.82■□□□□ 0.28
DNMT3B-204ENST00000353855 PDE1AP54750 535 aa16.81■□□□□ 0.28
DNMT3B-204ENST00000353855 ANO6Q4KMQ2 910 aa16.81■□□□□ 0.28
DNMT3B-204ENST00000353855 SRGAP3O43295 1099 aa16.81■□□□□ 0.28
DNMT3B-204ENST00000353855 NECAB1Q8N987 351 aa16.81■□□□□ 0.28
DNMT3B-204ENST00000353855 FEZ1Q99689 392 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms