RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 PLEKHG2Q9H7P9 1386 aa18.68■□□□□ 0.58
SEC13-202ENST00000350697 AEBP1Q8IUX7 1158 aa18.68■□□□□ 0.58
SEC13-202ENST00000350697 ZCRB1Q8TBF4 217 aaKnown RBP18.68■□□□□ 0.58
SEC13-202ENST00000350697 FAM182BQ5T319 152 aa18.66■□□□□ 0.58
SEC13-202ENST00000350697 MARCH10Q8NA82 808 aaPredicted RBP18.66■□□□□ 0.58
SEC13-202ENST00000350697 HMOX1P09601 288 aa18.66■□□□□ 0.58
SEC13-202ENST00000350697 FAM196AQ6ZSG2 479 aa18.66■□□□□ 0.58
SEC13-202ENST00000350697 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.66■□□□□ 0.584e-7■■■□□ 17.9
SEC13-202ENST00000350697 PKD1L3Q7Z443 1732 aa18.65■□□□□ 0.58
SEC13-202ENST00000350697 EP400Q96L91 3159 aa18.65■□□□□ 0.58
SEC13-202ENST00000350697 SPG7Q9UQ90 795 aa18.65■□□□□ 0.58
SEC13-202ENST00000350697 SHANK3Q9BYB0 1731 aa18.64■□□□□ 0.57
SEC13-202ENST00000350697 PCDH11XQ9BZA7 1347 aa18.64■□□□□ 0.57
SEC13-202ENST00000350697 PCDH11YQ9BZA8 1340 aa18.64■□□□□ 0.57
SEC13-202ENST00000350697 U2AF1L5P0DN76 240 aaPredicted RBP18.64■□□□□ 0.57
SEC13-202ENST00000350697 U2AF1Q01081 240 aaKnown RBP eCLIP18.64■□□□□ 0.57
SEC13-202ENST00000350697 DDX54Q8TDD1 881 aaKnown RBP18.64■□□□□ 0.57
SEC13-202ENST00000350697 BCL9O00512 1426 aa18.63■□□□□ 0.57
SEC13-202ENST00000350697 AMOTQ4VCS5 1084 aa18.62■□□□□ 0.57
SEC13-202ENST00000350697 PLEKHO1Q53GL0 409 aaPredicted RBP18.62■□□□□ 0.57
SEC13-202ENST00000350697 FCHSD2O94868 740 aa18.6■□□□□ 0.57
SEC13-202ENST00000350697 UPF1Q92900 1129 aaKnown RBP eCLIP18.6■□□□□ 0.57
SEC13-202ENST00000350697 RSPH6AQ9H0K4 717 aa18.6■□□□□ 0.57
SEC13-202ENST00000350697 CYP27B1O15528 508 aa18.59■□□□□ 0.57
SEC13-202ENST00000350697 CCDC125Q86Z20 511 aa18.58■□□□□ 0.57
SEC13-202ENST00000350697 SBF2Q86WG5 1849 aa18.58■□□□□ 0.56
SEC13-202ENST00000350697 PRKAR2BP31323 418 aa18.57■□□□□ 0.56
SEC13-202ENST00000350697 IFNL2Q8IZJ0 200 aa18.57■□□□□ 0.56
SEC13-202ENST00000350697 KAT6BQ8WYB5 2073 aa18.57■□□□□ 0.56
SEC13-202ENST00000350697 TRIM37O94972 964 aa18.57■□□□□ 0.56
SEC13-202ENST00000350697 PHKG2P15735 406 aa18.57■□□□□ 0.56
SEC13-202ENST00000350697 ZNF530Q6P9A1 599 aaPredicted RBP18.57■□□□□ 0.56
SEC13-202ENST00000350697 WDR43Q15061 677 aaKnown RBP eCLIP18.56■□□□□ 0.561e-6■■■□□ 17.5
SEC13-202ENST00000350697 DIEXFQ68CQ4 756 aaKnown RBP18.56■□□□□ 0.56
SEC13-202ENST00000350697 NKX1-1Q15270 411 aaPredicted RBP18.55■□□□□ 0.56
SEC13-202ENST00000350697 C1orf141Q5JVX7 400 aa18.55■□□□□ 0.56
SEC13-202ENST00000350697 PNNQ9H307 717 aaKnown RBP18.55■□□□□ 0.56
SEC13-202ENST00000350697 HSP90AB1P08238 724 aaKnown RBP18.54■□□□□ 0.56
SEC13-202ENST00000350697 SF3B2Q13435 895 aaKnown RBP18.54■□□□□ 0.56
SEC13-202ENST00000350697 MTHFSDQ2M296 383 aaKnown RBP18.54■□□□□ 0.56
SEC13-202ENST00000350697 CCDC184Q52MB2 194 aa18.54■□□□□ 0.56
SEC13-202ENST00000350697 MRS2Q9HD23 443 aa18.54■□□□□ 0.56
SEC13-202ENST00000350697 NEFMP07197 916 aa18.53■□□□□ 0.56
SEC13-202ENST00000350697 GAS2L2Q8NHY3 880 aa18.53■□□□□ 0.56
SEC13-202ENST00000350697 ACSBG1Q96GR2 724 aa18.53■□□□□ 0.56
SEC13-202ENST00000350697 BCL11BQ9C0K0 894 aaPredicted RBP18.53■□□□□ 0.56
SEC13-202ENST00000350697 NHSQ6T4R5 1651 aa18.53■□□□□ 0.56
SEC13-202ENST00000350697 AKAP4Q5JQC9 854 aa18.52■□□□□ 0.56
SEC13-202ENST00000350697 PHACTR3Q96KR7 559 aa18.52■□□□□ 0.56
SEC13-202ENST00000350697 DOT1LQ8TEK3 1739 aa18.52■□□□□ 0.55
SEC13-202ENST00000350697 TNS1Q9HBL0 1735 aaKnown RBP18.52■□□□□ 0.55
SEC13-202ENST00000350697 KCNQ2O43526 872 aa18.51■□□□□ 0.55
SEC13-202ENST00000350697 PLEKHF1Q96S99 279 aa18.51■□□□□ 0.55
SEC13-202ENST00000350697 PRIM1P49642 420 aaKnown RBP18.5■□□□□ 0.55
SEC13-202ENST00000350697 DCAF5Q96JK2 942 aa18.5■□□□□ 0.55
SEC13-202ENST00000350697 ADAMTS8Q9UP79 889 aa18.5■□□□□ 0.55
SEC13-202ENST00000350697 SYTL4Q96C24 671 aaPredicted RBP18.49■□□□□ 0.55
SEC13-202ENST00000350697 APBA3O96018 575 aa18.49■□□□□ 0.55
SEC13-202ENST00000350697 BAG6P46379 1132 aa18.49■□□□□ 0.55
SEC13-202ENST00000350697 PTF1AQ7RTS3 328 aa18.49■□□□□ 0.55
SEC13-202ENST00000350697 MAPK8IP3Q9UPT6 1336 aa18.49■□□□□ 0.55
SEC13-202ENST00000350697 TOGARAM1Q9Y4F4 1720 aa18.48■□□□□ 0.55
SEC13-202ENST00000350697 KDM6AO15550 1401 aaPredicted RBP18.48■□□□□ 0.55
SEC13-202ENST00000350697 MPRIPQ6WCQ1 1025 aa18.48■□□□□ 0.55
SEC13-202ENST00000350697 PNISRQ8TF01 805 aaKnown RBP18.48■□□□□ 0.55
SEC13-202ENST00000350697 MAP3K5Q99683 1374 aa18.47■□□□□ 0.55
SEC13-202ENST00000350697 ERVV-2B6SEH9 535 aa18.47■□□□□ 0.55
SEC13-202ENST00000350697 ITGB4P16144 1822 aa18.47■□□□□ 0.55
SEC13-202ENST00000350697 BTAF1O14981 1849 aa18.46■□□□□ 0.55
SEC13-202ENST00000350697 GNAT3A8MTJ3 354 aa18.46■□□□□ 0.55
SEC13-202ENST00000350697 SCN11AQ9UI33 1791 aa18.46■□□□□ 0.55
SEC13-202ENST00000350697 DEFB132Q7Z7B7 95 aa18.45■□□□□ 0.54
SEC13-202ENST00000350697 RUNDC1Q96C34 613 aa18.45■□□□□ 0.54
SEC13-202ENST00000350697 CCER2I3L3R5 266 aa18.44■□□□□ 0.54
SEC13-202ENST00000350697 PLSCR1O15162 318 aa18.44■□□□□ 0.54
SEC13-202ENST00000350697 CCDC146Q8IYE0 955 aa18.44■□□□□ 0.54
SEC13-202ENST00000350697 TMOD3Q9NYL9 352 aa18.44■□□□□ 0.54
SEC13-202ENST00000350697 ADAMTS7Q9UKP4 1686 aa18.44■□□□□ 0.54
SEC13-202ENST00000350697 VIRMAQ69YN4 1812 aaKnown RBP18.43■□□□□ 0.54
SEC13-202ENST00000350697 RNMTO43148 476 aaKnown RBP18.43■□□□□ 0.54
SEC13-202ENST00000350697 EN1Q05925 392 aaPredicted RBP18.43■□□□□ 0.54
SEC13-202ENST00000350697 NFE2L2Q16236 605 aa18.43■□□□□ 0.54
SEC13-202ENST00000350697 LGR6Q9HBX8 967 aa18.43■□□□□ 0.54
SEC13-202ENST00000350697 HTATSF1O43719 755 aaKnown RBP18.42■□□□□ 0.54
SEC13-202ENST00000350697 CABP4P57796 275 aa18.42■□□□□ 0.54
SEC13-202ENST00000350697 PIGBQ92521 554 aa18.42■□□□□ 0.54
SEC13-202ENST00000350697 RTF1Q92541 710 aaKnown RBP18.42■□□□□ 0.54
SEC13-202ENST00000350697 RGPD3A6NKT7 1758 aaPredicted RBP18.42■□□□□ 0.54
SEC13-202ENST00000350697 RGPD4Q7Z3J3 1758 aa18.42■□□□□ 0.54
SEC13-202ENST00000350697 CAMKK2Q96RR4 588 aa18.41■□□□□ 0.54
SEC13-202ENST00000350697 DLG5Q8TDM6 1919 aa18.41■□□□□ 0.54
SEC13-202ENST00000350697 MIER1Q8N108 512 aa18.4■□□□□ 0.54
SEC13-202ENST00000350697 IL17REQ8NFR9 667 aa18.4■□□□□ 0.54
SEC13-202ENST00000350697 MRC1P22897 1456 aa18.4■□□□□ 0.54
SEC13-202ENST00000350697 TMPOP42166 694 aaKnown RBP18.4■□□□□ 0.54
SEC13-202ENST00000350697 EZH2Q15910 746 aaKnown RBP18.4■□□□□ 0.54
SEC13-202ENST00000350697 NFATC2IPQ8NCF5 419 aa18.4■□□□□ 0.54
SEC13-202ENST00000350697 SLC52A2Q9HAB3 445 aa18.4■□□□□ 0.54
SEC13-202ENST00000350697 CEMIPQ8WUJ3 1361 aa18.39■□□□□ 0.54
SEC13-202ENST00000350697 SMARCC1Q92922 1105 aaPredicted RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms