RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 ZFAND3Q9H8U3 227 aa11.53□□□□□ -0.56
UBE2D3-204ENST00000349311 RNF135Q8IUD6 432 aa11.52□□□□□ -0.57
UBE2D3-204ENST00000349311 PGPEP1Q9NXJ5 209 aa11.52□□□□□ -0.57
UBE2D3-204ENST00000349311 ADD1P35611 737 aaKnown RBP11.51□□□□□ -0.57
UBE2D3-204ENST00000349311 TBC1D9Q6ZT07 1266 aa11.51□□□□□ -0.57
UBE2D3-204ENST00000349311 PLPP7Q8NBV4 271 aa11.51□□□□□ -0.57
UBE2D3-204ENST00000349311 CAPN5O15484 640 aaPredicted RBP11.5□□□□□ -0.57
UBE2D3-204ENST00000349311 KDF1Q8NAX2 398 aaPredicted RBP11.5□□□□□ -0.57
UBE2D3-204ENST00000349311 LOC105371045A0A1W2PR82 267 aa11.49□□□□□ -0.57
UBE2D3-204ENST00000349311 ATP9BO43861 1147 aa11.49□□□□□ -0.57
UBE2D3-204ENST00000349311 LZTS3O60299 673 aaPredicted RBP11.49□□□□□ -0.57
UBE2D3-204ENST00000349311 SCTRP47872 440 aa11.49□□□□□ -0.57
UBE2D3-204ENST00000349311 PLEKHM2Q8IWE5 1019 aa11.49□□□□□ -0.57
UBE2D3-204ENST00000349311 PPP1R12CQ9BZL4 782 aa11.49□□□□□ -0.57
UBE2D3-204ENST00000349311 PCDHB11Q9Y5F2 797 aa11.49□□□□□ -0.57
UBE2D3-204ENST00000349311 AXIN1O15169 862 aa11.48□□□□□ -0.57
UBE2D3-204ENST00000349311 RAB15P59190 212 aa11.48□□□□□ -0.57
UBE2D3-204ENST00000349311 CC2D2BQ6DHV5 1058 aa11.48□□□□□ -0.57
UBE2D3-204ENST00000349311 MEIOBQ8N635 442 aa11.48□□□□□ -0.57
UBE2D3-204ENST00000349311 ARID3CA6NKF2 412 aa11.47□□□□□ -0.57
UBE2D3-204ENST00000349311 Q6ZNB5 142 aa11.47□□□□□ -0.57
UBE2D3-204ENST00000349311 DOLKQ9UPQ8 538 aa11.47□□□□□ -0.57
UBE2D3-204ENST00000349311 PALM3A6NDB9 673 aaPredicted RBP11.46□□□□□ -0.57
UBE2D3-204ENST00000349311 ST8SIA5O15466 376 aa11.46□□□□□ -0.57
UBE2D3-204ENST00000349311 SKIP12755 728 aa11.46□□□□□ -0.57
UBE2D3-204ENST00000349311 CBLBQ13191 982 aa11.46□□□□□ -0.57
UBE2D3-204ENST00000349311 TRIM52Q96A61 297 aa11.46□□□□□ -0.57
UBE2D3-204ENST00000349311 OSBPL3Q9H4L5 887 aa11.46□□□□□ -0.57
UBE2D3-204ENST00000349311 CFTRP13569 1480 aa11.45□□□□□ -0.58
UBE2D3-204ENST00000349311 CFAP70Q5T0N1 1121 aa11.45□□□□□ -0.58
UBE2D3-204ENST00000349311 TRIM46Q7Z4K8 759 aa11.45□□□□□ -0.58
UBE2D3-204ENST00000349311 TFIP11Q9UBB9 837 aaKnown RBP11.45□□□□□ -0.58
UBE2D3-204ENST00000349311 DACH1Q9UI36 760 aa11.45□□□□□ -0.58
UBE2D3-204ENST00000349311 MAFBQ9Y5Q3 323 aaPredicted RBP11.45□□□□□ -0.58
UBE2D3-204ENST00000349311 USP17L5A8MUK1 530 aa11.44□□□□□ -0.58
UBE2D3-204ENST00000349311 USP4Q13107 963 aa11.44□□□□□ -0.58
UBE2D3-204ENST00000349311 CYLDQ9NQC7 956 aa11.44□□□□□ -0.58
UBE2D3-204ENST00000349311 ADH1AP07327 375 aa11.43□□□□□ -0.58
UBE2D3-204ENST00000349311 SRPK2P78362 688 aaKnown RBP11.42□□□□□ -0.58
UBE2D3-204ENST00000349311 ATP13A2Q9NQ11 1180 aa11.42□□□□□ -0.58
UBE2D3-204ENST00000349311 USP17L3A6NCW0 530 aa11.41□□□□□ -0.58
UBE2D3-204ENST00000349311 USP17L4A6NCW7 530 aa11.41□□□□□ -0.58
UBE2D3-204ENST00000349311 NCOA4Q13772 614 aa11.41□□□□□ -0.58
UBE2D3-204ENST00000349311 MRPL14Q6P1L8 145 aaKnown RBP11.41□□□□□ -0.58
UBE2D3-204ENST00000349311 USP17L2Q6R6M4 530 aa11.41□□□□□ -0.58
UBE2D3-204ENST00000349311 USP17L1Q7RTZ2 530 aa11.41□□□□□ -0.58
UBE2D3-204ENST00000349311 SIRT1Q96EB6 747 aa11.41□□□□□ -0.58
UBE2D3-204ENST00000349311 PCDHGA11Q9Y5H2 935 aa11.41□□□□□ -0.58
UBE2D3-204ENST00000349311 SERPINA10Q9UK55 444 aa11.4□□□□□ -0.58
UBE2D3-204ENST00000349311 BIVM-ERCC5R4GMW8 1640 aa11.39□□□□□ -0.59
UBE2D3-204ENST00000349311 EML3Q32P44 896 aa11.39□□□□□ -0.59
UBE2D3-204ENST00000349311 OXLD1Q5BKU9 147 aa11.39□□□□□ -0.59
UBE2D3-204ENST00000349311 KANK4Q5T7N3 995 aaPredicted RBP11.39□□□□□ -0.59
UBE2D3-204ENST00000349311 LINC00528Q8N1L1 170 aa11.39□□□□□ -0.59
UBE2D3-204ENST00000349311 TSEN34Q9BSV6 310 aaKnown RBP11.39□□□□□ -0.59
UBE2D3-204ENST00000349311 LAMC3Q9Y6N6 1575 aa11.39□□□□□ -0.59
UBE2D3-204ENST00000349311 ABCC8Q09428 1581 aa11.38□□□□□ -0.59
UBE2D3-204ENST00000349311 SPINT1O43278 529 aa11.38□□□□□ -0.59
UBE2D3-204ENST00000349311 BMP1P13497 986 aa11.38□□□□□ -0.59
UBE2D3-204ENST00000349311 PTGIRP43119 386 aa11.38□□□□□ -0.59
UBE2D3-204ENST00000349311 DIEXFQ68CQ4 756 aaKnown RBP11.38□□□□□ -0.59
UBE2D3-204ENST00000349311 ATP5J2-PTCD1G3V325 749 aa11.37□□□□□ -0.59
UBE2D3-204ENST00000349311 MYCP01106 439 aaPredicted RBP11.37□□□□□ -0.59
UBE2D3-204ENST00000349311 CYP2U1Q7Z449 544 aa11.37□□□□□ -0.59
UBE2D3-204ENST00000349311 DEPDC4Q8N2C3 294 aa11.37□□□□□ -0.59
UBE2D3-204ENST00000349311 CCDC82Q8N4S0 544 aa11.37□□□□□ -0.59
UBE2D3-204ENST00000349311 CADPSQ9ULU8 1353 aa11.37□□□□□ -0.59
UBE2D3-204ENST00000349311 TOP2BQ02880 1626 aa11.36□□□□□ -0.59
UBE2D3-204ENST00000349311 ZBTB7BO15156 539 aaPredicted RBP11.36□□□□□ -0.59
UBE2D3-204ENST00000349311 DKK1O94907 266 aa11.36□□□□□ -0.59
UBE2D3-204ENST00000349311 AGBL1Q96MI9 1066 aa11.36□□□□□ -0.59
UBE2D3-204ENST00000349311 NOD1Q9Y239 953 aa11.36□□□□□ -0.59
UBE2D3-204ENST00000349311 HRH3Q9Y5N1 445 aa11.36□□□□□ -0.59
UBE2D3-204ENST00000349311 WASLO00401 505 aaPredicted RBP11.35□□□□□ -0.59
UBE2D3-204ENST00000349311 GNRH1P01148 92 aa11.35□□□□□ -0.59
UBE2D3-204ENST00000349311 LMOD1P29536 600 aaPredicted RBP11.35□□□□□ -0.59
UBE2D3-204ENST00000349311 ZFP42Q96MM3 310 aa11.35□□□□□ -0.59
UBE2D3-204ENST00000349311 MKRN1Q9UHC7 482 aaKnown RBP11.34□□□□□ -0.59
UBE2D3-204ENST00000349311 WRNQ14191 1432 aaPredicted RBP eCLIP11.34□□□□□ -0.595e-6■■■■■ 29.2
UBE2D3-204ENST00000349311 SYNJ1O43426 1573 aa11.33□□□□□ -0.6
UBE2D3-204ENST00000349311 SCNN1DP51172 638 aa11.33□□□□□ -0.6
UBE2D3-204ENST00000349311 CLDN10P78369 228 aa11.33□□□□□ -0.6
UBE2D3-204ENST00000349311 CCDC97Q96F63 343 aaPredicted RBP11.33□□□□□ -0.6
UBE2D3-204ENST00000349311 CLSPNQ9HAW4 1339 aa11.33□□□□□ -0.6
UBE2D3-204ENST00000349311 XAGE2Q96GT9 111 aa11.32□□□□□ -0.6
UBE2D3-204ENST00000349311 PURBQ96QR8 312 aaKnown RBP11.32□□□□□ -0.6
UBE2D3-204ENST00000349311 GMPR2Q9P2T1 348 aaKnown RBP11.32□□□□□ -0.6
UBE2D3-204ENST00000349311 SOS2Q07890 1332 aaPredicted RBP11.32□□□□□ -0.6
UBE2D3-204ENST00000349311 A0A1W2PRU2 124 aa11.31□□□□□ -0.6
UBE2D3-204ENST00000349311 TMEM229AB2RXF0 380 aa11.31□□□□□ -0.6
UBE2D3-204ENST00000349311 GTF2IP78347 998 aa11.31□□□□□ -0.6
UBE2D3-204ENST00000349311 RELBQ01201 579 aa11.31□□□□□ -0.6
UBE2D3-204ENST00000349311 CLN3Q13286 438 aa11.31□□□□□ -0.6
UBE2D3-204ENST00000349311 TRIM50Q86XT4 487 aa11.31□□□□□ -0.6
UBE2D3-204ENST00000349311 TRIM47Q96LD4 638 aa11.31□□□□□ -0.6
UBE2D3-204ENST00000349311 ETNK1Q9HBU6 452 aa11.31□□□□□ -0.6
UBE2D3-204ENST00000349311 KIAA1024Q9UPX6 916 aa11.31□□□□□ -0.6
UBE2D3-204ENST00000349311 POTECB2RU33 542 aa11.3□□□□□ -0.6
UBE2D3-204ENST00000349311 IL2RAP01589 272 aa11.3□□□□□ -0.6
UBE2D3-204ENST00000349311 SCARF1Q14162 830 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms