RNA–Protein interactions for RNA: ENST00000347048.8

PTPA-202, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-202ENST00000347048 ANKRD44Q8N8A2 993 aa30.09■■■□□ 2.41
PTPA-202ENST00000347048 USP6P35125 1406 aa30.09■■■□□ 2.41
PTPA-202ENST00000347048 AEBP1Q8IUX7 1158 aa30.08■■■□□ 2.41
PTPA-202ENST00000347048 ISY1Q9ULR0 285 aaKnown RBP30.08■■■□□ 2.41
PTPA-202ENST00000347048 ATP10DQ9P241 1426 aa30.08■■■□□ 2.41
PTPA-202ENST00000347048 ACEP12821 1306 aa30.07■■■□□ 2.4
PTPA-202ENST00000347048 PLEKHM2Q8IWE5 1019 aa30.07■■■□□ 2.4
PTPA-202ENST00000347048 PLEKHG1Q9ULL1 1385 aa30.07■■■□□ 2.4
PTPA-202ENST00000347048 K7ELQ4 463 aaPredicted RBP30.06■■■□□ 2.4
PTPA-202ENST00000347048 GBP4Q96PP9 640 aa30.06■■■□□ 2.4
PTPA-202ENST00000347048 PEAK1Q9H792 1746 aa30.06■■■□□ 2.4
PTPA-202ENST00000347048 KDM4FA0A1W2PPD8 638 aa30.05■■■□□ 2.4
PTPA-202ENST00000347048 RAB3GAP1Q15042 981 aa30.05■■■□□ 2.4
PTPA-202ENST00000347048 ARHGEF10O15013 1369 aa30.04■■■□□ 2.4
PTPA-202ENST00000347048 TTC22Q5TAA0 569 aa30.04■■■□□ 2.4
PTPA-202ENST00000347048 GSPT1P15170 499 aaKnown RBP30.03■■■□□ 2.4
PTPA-202ENST00000347048 TNPO1Q92973 898 aaKnown RBP30.02■■■□□ 2.4
PTPA-202ENST00000347048 CRB1P82279 1406 aa30.02■■■□□ 2.4
PTPA-202ENST00000347048 SSH2Q76I76 1423 aa30.01■■■□□ 2.4
PTPA-202ENST00000347048 XRCC6P12956 609 aaKnown RBP eCLIP30.01■■■□□ 2.39
PTPA-202ENST00000347048 TTC21AQ8NDW8 1320 aa30■■■□□ 2.39
PTPA-202ENST00000347048 SKOR2Q2VWA4 1001 aaPredicted RBP30■■■□□ 2.39
PTPA-202ENST00000347048 CEP85Q6P2H3 762 aa30■■■□□ 2.39
PTPA-202ENST00000347048 RTL1A6NKG5 1358 aa30■■■□□ 2.39
PTPA-202ENST00000347048 HSP90AA1P07900 732 aaKnown RBP29.99■■■□□ 2.39
PTPA-202ENST00000347048 MRE11P49959 708 aa29.99■■■□□ 2.39
PTPA-202ENST00000347048 FMN2Q9NZ56 1722 aa29.99■■■□□ 2.39
PTPA-202ENST00000347048 RABEP1Q15276 862 aa29.98■■■□□ 2.39
PTPA-202ENST00000347048 MCM10Q7L590 875 aa29.98■■■□□ 2.39
PTPA-202ENST00000347048 MSH6P52701 1360 aa29.98■■■□□ 2.39
PTPA-202ENST00000347048 GZF1Q9H116 711 aaPredicted RBP29.97■■■□□ 2.39
PTPA-202ENST00000347048 HSP90AB2PQ58FF8 381 aa29.97■■■□□ 2.39
PTPA-202ENST00000347048 CD2BP2O95400 341 aaKnown RBP29.95■■■□□ 2.38
PTPA-202ENST00000347048 KRT24Q2M2I5 525 aa29.95■■■□□ 2.38
PTPA-202ENST00000347048 CASC1Q6TDU7 716 aa29.94■■■□□ 2.38
PTPA-202ENST00000347048 SBNO1A3KN83 1393 aa29.93■■■□□ 2.38
PTPA-202ENST00000347048 FLT4P35916 1363 aa29.93■■■□□ 2.38
PTPA-202ENST00000347048 HMMRO75330 724 aa29.93■■■□□ 2.38
PTPA-202ENST00000347048 CLEC17AQ6ZS10 378 aa29.93■■■□□ 2.38
PTPA-202ENST00000347048 KDRP35968 1356 aa29.93■■■□□ 2.38
PTPA-202ENST00000347048 CCT4P50991 539 aaKnown RBP29.9■■■□□ 2.38
PTPA-202ENST00000347048 RTF1Q92541 710 aaKnown RBP29.9■■■□□ 2.38
PTPA-202ENST00000347048 RBM42Q9BTD8 480 aaKnown RBP29.9■■■□□ 2.38
PTPA-202ENST00000347048 USP26Q9BXU7 913 aa29.9■■■□□ 2.38
PTPA-202ENST00000347048 MEIS3Q99687 375 aa29.9■■■□□ 2.38
PTPA-202ENST00000347048 MAP3K19Q56UN5 1328 aa29.89■■■□□ 2.38
PTPA-202ENST00000347048 PTPRUQ92729 1446 aa29.89■■■□□ 2.38
PTPA-202ENST00000347048 SLC4A2P04920 1241 aa29.89■■■□□ 2.38
PTPA-202ENST00000347048 LTKP29376 864 aa29.88■■■□□ 2.37
PTPA-202ENST00000347048 ANO8Q9HCE9 1232 aaPredicted RBP29.88■■■□□ 2.37
PTPA-202ENST00000347048 C16orf71Q8IYS4 520 aaPredicted RBP29.88■■■□□ 2.37
PTPA-202ENST00000347048 GAS2L2Q8NHY3 880 aa29.88■■■□□ 2.37
PTPA-202ENST00000347048 HTATSF1O43719 755 aaKnown RBP29.87■■■□□ 2.37
PTPA-202ENST00000347048 GRPEL1Q9HAV7 217 aa29.87■■■□□ 2.37
PTPA-202ENST00000347048 GOLGA6L22H0YM25 854 aa29.86■■■□□ 2.37
PTPA-202ENST00000347048 TSPYL4Q9UJ04 414 aa29.86■■■□□ 2.37
PTPA-202ENST00000347048 SDSP20132 328 aa29.86■■■□□ 2.37
PTPA-202ENST00000347048 MTHFSDQ2M296 383 aaKnown RBP29.86■■■□□ 2.37
PTPA-202ENST00000347048 IGSF1Q8N6C5 1336 aa29.85■■■□□ 2.37
PTPA-202ENST00000347048 SLIT1O75093 1534 aa29.85■■■□□ 2.37
PTPA-202ENST00000347048 OSBPL3Q9H4L5 887 aa29.84■■■□□ 2.37
PTPA-202ENST00000347048 EID1Q9Y6B2 187 aa29.84■■■□□ 2.37
PTPA-202ENST00000347048 LRRC37A3O60309 1634 aa29.84■■■□□ 2.37
PTPA-202ENST00000347048 REC8O95072 547 aa29.84■■■□□ 2.37
PTPA-202ENST00000347048 ARHGAP23Q9P227 1491 aa29.83■■■□□ 2.37
PTPA-202ENST00000347048 OTUD7AQ8TE49 926 aaPredicted RBP29.83■■■□□ 2.37
PTPA-202ENST00000347048 SOS1Q07889 1333 aaPredicted RBP29.82■■■□□ 2.36
PTPA-202ENST00000347048 NUTM2FA1L443 756 aa29.82■■■□□ 2.36
PTPA-202ENST00000347048 DIP2AQ14689 1571 aa29.81■■■□□ 2.36
PTPA-202ENST00000347048 NUCB2P80303 420 aa29.81■■■□□ 2.36
PTPA-202ENST00000347048 ARXQ96QS3 562 aa29.81■■■□□ 2.36
PTPA-202ENST00000347048 PANK2Q9BZ23 570 aa29.81■■■□□ 2.36
PTPA-202ENST00000347048 FOXD4L1Q9NU39 408 aa29.81■■■□□ 2.36
PTPA-202ENST00000347048 TBX22Q9Y458 520 aa29.81■■■□□ 2.36
PTPA-202ENST00000347048 SMARCA5O60264 1052 aaPredicted RBP29.79■■■□□ 2.36
PTPA-202ENST00000347048 SSFA2P28290 1259 aa29.79■■■□□ 2.36
PTPA-202ENST00000347048 STK31Q9BXU1 1019 aa29.79■■■□□ 2.36
PTPA-202ENST00000347048 RRAGDQ9NQL2 400 aaPredicted RBP29.79■■■□□ 2.36
PTPA-202ENST00000347048 AMOTL2Q9Y2J4 779 aa29.79■■■□□ 2.36
PTPA-202ENST00000347048 ST18O60284 1047 aa29.79■■■□□ 2.36
PTPA-202ENST00000347048 CWC22Q9HCG8 908 aaKnown RBP29.79■■■□□ 2.36
PTPA-202ENST00000347048 PIK3C2AO00443 1686 aa29.78■■■□□ 2.36
PTPA-202ENST00000347048 CEP170BQ9Y4F5 1589 aaPredicted RBP29.78■■■□□ 2.36
PTPA-202ENST00000347048 FOXO3O43524 673 aa29.78■■■□□ 2.36
PTPA-202ENST00000347048 GNAI2P04899 355 aa29.78■■■□□ 2.36
PTPA-202ENST00000347048 AMPHP49418 695 aa29.78■■■□□ 2.36
PTPA-202ENST00000347048 ERC2O15083 957 aa29.77■■■□□ 2.36
PTPA-202ENST00000347048 IBTKQ9P2D0 1353 aaPredicted RBP29.77■■■□□ 2.36
PTPA-202ENST00000347048 FAM208AQ9UK61 1670 aaKnown RBP29.77■■■□□ 2.36
PTPA-202ENST00000347048 NGDNQ8NEJ9 315 aaKnown RBP29.77■■■□□ 2.36
PTPA-202ENST00000347048 SLC26A8Q96RN1 970 aa29.77■■■□□ 2.36
PTPA-202ENST00000347048 EYA1Q99502 592 aa29.77■■■□□ 2.36
PTPA-202ENST00000347048 SOX12O15370 315 aa29.76■■■□□ 2.35
PTPA-202ENST00000347048 G2E3Q7L622 706 aa29.76■■■□□ 2.35
PTPA-202ENST00000347048 MIS18AQ9NYP9 233 aa29.76■■■□□ 2.35
PTPA-202ENST00000347048 USP54Q70EL1 1684 aa29.76■■■□□ 2.35
PTPA-202ENST00000347048 BAG4O95429 457 aaKnown RBP29.75■■■□□ 2.35
PTPA-202ENST00000347048 SLC4A10Q6U841 1118 aa29.75■■■□□ 2.35
PTPA-202ENST00000347048 BABAM1Q9NWV8 329 aa29.75■■■□□ 2.35
PTPA-202ENST00000347048 ANKARQ7Z5J8 1434 aa29.75■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms