RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 CCDC112Q8NEF3 446 aa13□□□□□ -0.33
RPL28-201ENST00000344063 TARBP1Q13395 1621 aaKnown RBP13□□□□□ -0.33
RPL28-201ENST00000344063 FYB1O15117 783 aa13□□□□□ -0.33
RPL28-201ENST00000344063 SMARCA5O60264 1052 aaPredicted RBP13□□□□□ -0.33
RPL28-201ENST00000344063 DCTN1Q14203 1278 aa13□□□□□ -0.33
RPL28-201ENST00000344063 AEBP1Q8IUX7 1158 aa13□□□□□ -0.33
RPL28-201ENST00000344063 MNS1Q8NEH6 495 aa13□□□□□ -0.33
RPL28-201ENST00000344063 MAST1Q9Y2H9 1570 aa13□□□□□ -0.33
RPL28-201ENST00000344063 KLHL40Q2TBA0 621 aa13□□□□□ -0.33
RPL28-201ENST00000344063 FMNL2Q96PY5 1086 aa13□□□□□ -0.33
RPL28-201ENST00000344063 WASLO00401 505 aaPredicted RBP13□□□□□ -0.33
RPL28-201ENST00000344063 MAP4K4O95819 1239 aaPredicted RBP13□□□□□ -0.33
RPL28-201ENST00000344063 CEBPZQ03701 1054 aaKnown RBP13□□□□□ -0.33
RPL28-201ENST00000344063 EXOC6BQ9Y2D4 811 aa13□□□□□ -0.33
RPL28-201ENST00000344063 PTPRCP08575 1304 aa12.99□□□□□ -0.33
RPL28-201ENST00000344063 CPLX1O14810 134 aa12.99□□□□□ -0.33
RPL28-201ENST00000344063 CYP46A1Q9Y6A2 500 aa12.99□□□□□ -0.33
RPL28-201ENST00000344063 ARHGEF5Q12774 1597 aa12.99□□□□□ -0.33
RPL28-201ENST00000344063 AIMP1Q12904 312 aaKnown RBP12.99□□□□□ -0.33
RPL28-201ENST00000344063 MCM10Q7L590 875 aa12.99□□□□□ -0.33
RPL28-201ENST00000344063 DENND4BO75064 1496 aaPredicted RBP12.99□□□□□ -0.33
RPL28-201ENST00000344063 SMC5Q8IY18 1101 aa12.99□□□□□ -0.33
RPL28-201ENST00000344063 SNX21Q969T3 373 aa12.98□□□□□ -0.33
RPL28-201ENST00000344063 MX1P20591 662 aa12.98□□□□□ -0.33
RPL28-201ENST00000344063 MBIPQ9NS73 344 aa12.98□□□□□ -0.33
RPL28-201ENST00000344063 PRIM1P49642 420 aaKnown RBP12.98□□□□□ -0.33
RPL28-201ENST00000344063 TOMM22Q9NS69 142 aa12.98□□□□□ -0.33
RPL28-201ENST00000344063 DYNC1I1O14576 645 aa12.97□□□□□ -0.33
RPL28-201ENST00000344063 SRGAP3O43295 1099 aa12.97□□□□□ -0.33
RPL28-201ENST00000344063 LARP6Q9BRS8 491 aaKnown RBP12.97□□□□□ -0.33
RPL28-201ENST00000344063 OFD1O75665 1012 aa12.97□□□□□ -0.33
RPL28-201ENST00000344063 PDIA4P13667 645 aaKnown RBP12.97□□□□□ -0.33
RPL28-201ENST00000344063 ANKRD1Q15327 319 aa12.97□□□□□ -0.33
RPL28-201ENST00000344063 SKIDA1Q1XH10 827 aa12.96□□□□□ -0.33
RPL28-201ENST00000344063 ZSCAN31Q96LW9 406 aaPredicted RBP12.96□□□□□ -0.33
RPL28-201ENST00000344063 CCDC192P0DO97 292 aa12.96□□□□□ -0.33
RPL28-201ENST00000344063 TRDNQ13061 729 aa12.96□□□□□ -0.33
RPL28-201ENST00000344063 FILIP1Q7Z7B0 1213 aa12.96□□□□□ -0.33
RPL28-201ENST00000344063 IL1RAPL2Q9NP60 686 aa12.96□□□□□ -0.33
RPL28-201ENST00000344063 ZNF518AQ6AHZ1 1483 aa12.96□□□□□ -0.33
RPL28-201ENST00000344063 GNAT3A8MTJ3 354 aa12.96□□□□□ -0.34
RPL28-201ENST00000344063 GPS2Q13227 327 aa12.96□□□□□ -0.34
RPL28-201ENST00000344063 CAMK4Q16566 473 aa12.96□□□□□ -0.34
RPL28-201ENST00000344063 NCBP3Q53F19 620 aaKnown RBP12.96□□□□□ -0.34
RPL28-201ENST00000344063 TTC22Q5TAA0 569 aa12.96□□□□□ -0.34
RPL28-201ENST00000344063 SYNE3Q6ZMZ3 975 aa12.96□□□□□ -0.34
RPL28-201ENST00000344063 ABCC10Q5T3U5 1492 aa12.96□□□□□ -0.34
RPL28-201ENST00000344063 RAB11FIP3O75154 756 aa12.95□□□□□ -0.34
RPL28-201ENST00000344063 ABCC2Q92887 1545 aa12.95□□□□□ -0.34
RPL28-201ENST00000344063 KRT85P78386 507 aa12.95□□□□□ -0.34
RPL28-201ENST00000344063 TRIM29Q14134 588 aa12.95□□□□□ -0.34
RPL28-201ENST00000344063 FERMT3Q86UX7 667 aa12.95□□□□□ -0.34
RPL28-201ENST00000344063 KIF1BPQ96EK5 621 aa12.95□□□□□ -0.34
RPL28-201ENST00000344063 ARGLU1Q9NWB6 273 aaPredicted RBP12.95□□□□□ -0.34
RPL28-201ENST00000344063 WDR7Q9Y4E6 1490 aa12.95□□□□□ -0.34
RPL28-201ENST00000344063 C16orf45Q96MC5 204 aaPredicted RBP12.95□□□□□ -0.34
RPL28-201ENST00000344063 TTC12Q9H892 705 aaPredicted RBP12.95□□□□□ -0.34
RPL28-201ENST00000344063 ZBTB40Q9NUA8 1239 aa12.95□□□□□ -0.34
RPL28-201ENST00000344063 FBXO31Q5XUX0 539 aaPredicted RBP12.94□□□□□ -0.34
RPL28-201ENST00000344063 ZNF530Q6P9A1 599 aaPredicted RBP12.94□□□□□ -0.34
RPL28-201ENST00000344063 THEMISQ8N1K5 641 aaPredicted RBP12.94□□□□□ -0.34
RPL28-201ENST00000344063 PPP6R1Q9UPN7 881 aa12.94□□□□□ -0.34
RPL28-201ENST00000344063 MBD5Q9P267 1494 aa12.94□□□□□ -0.34
RPL28-201ENST00000344063 DDX54Q8TDD1 881 aaKnown RBP12.94□□□□□ -0.34
RPL28-201ENST00000344063 NEUROD6Q96NK8 337 aa12.94□□□□□ -0.34
RPL28-201ENST00000344063 SDF4Q9BRK5 362 aa12.94□□□□□ -0.34
RPL28-201ENST00000344063 SLC26A8Q96RN1 970 aa12.94□□□□□ -0.34
RPL28-201ENST00000344063 ZKSCAN5Q9Y2L8 839 aa12.94□□□□□ -0.34
RPL28-201ENST00000344063 PES1O00541 588 aaKnown RBP12.94□□□□□ -0.34
RPL28-201ENST00000344063 ADCY5O95622 1261 aa12.94□□□□□ -0.34
RPL28-201ENST00000344063 NLRP2Q9NX02 1062 aa12.94□□□□□ -0.34
RPL28-201ENST00000344063 MIS18AQ9NYP9 233 aa12.94□□□□□ -0.34
RPL28-201ENST00000344063 TTC21BQ7Z4L5 1316 aa12.93□□□□□ -0.34
RPL28-201ENST00000344063 NAT10Q9H0A0 1025 aaKnown RBP12.93□□□□□ -0.34
RPL28-201ENST00000344063 STK3Q13188 491 aa12.93□□□□□ -0.34
RPL28-201ENST00000344063 MRPL50Q8N5N7 158 aaKnown RBP12.93□□□□□ -0.34
RPL28-201ENST00000344063 TNMDQ9H2S6 317 aa12.93□□□□□ -0.34
RPL28-201ENST00000344063 SMC2O95347 1197 aa12.93□□□□□ -0.34
RPL28-201ENST00000344063 HCLS1P14317 486 aaPredicted RBP12.93□□□□□ -0.34
RPL28-201ENST00000344063 RALYLQ86SE5 291 aaKnown RBP12.93□□□□□ -0.34
RPL28-201ENST00000344063 FAM177A1Q8N128 213 aaPredicted RBP12.93□□□□□ -0.34
RPL28-201ENST00000344063 GLRX3O76003 335 aaKnown RBP12.93□□□□□ -0.34
RPL28-201ENST00000344063 BBXQ8WY36 941 aaPredicted RBP12.93□□□□□ -0.34
RPL28-201ENST00000344063 AKAP17AQ02040 695 aaKnown RBP12.92□□□□□ -0.34
RPL28-201ENST00000344063 LARP1BQ659C4 914 aaKnown RBP12.92□□□□□ -0.34
RPL28-201ENST00000344063 RAB3GAP1Q15042 981 aa12.92□□□□□ -0.34
RPL28-201ENST00000344063 BLOC1S2Q6QNY1 142 aa12.92□□□□□ -0.34
RPL28-201ENST00000344063 PDRG1Q9NUG6 133 aa12.92□□□□□ -0.34
RPL28-201ENST00000344063 DMRT2Q9Y5R5 561 aa12.92□□□□□ -0.34
RPL28-201ENST00000344063 CWC27Q6UX04 472 aaKnown RBP12.92□□□□□ -0.34
RPL28-201ENST00000344063 ANKRD44Q8N8A2 993 aa12.92□□□□□ -0.34
RPL28-201ENST00000344063 HOOK1Q9UJC3 728 aaKnown RBP12.92□□□□□ -0.34
RPL28-201ENST00000344063 ASXL2Q76L83 1435 aa12.92□□□□□ -0.34
RPL28-201ENST00000344063 F6X3S4 739 aa12.92□□□□□ -0.34
RPL28-201ENST00000344063 KINO60870 393 aaKnown RBP12.92□□□□□ -0.34
RPL28-201ENST00000344063 JAKMIP1Q96N16 626 aaKnown RBP12.92□□□□□ -0.34
RPL28-201ENST00000344063 CEP170Q5SW79 1584 aa12.92□□□□□ -0.34
RPL28-201ENST00000344063 ZFYVE9O95405 1425 aa12.91□□□□□ -0.34
RPL28-201ENST00000344063 TAF7Q15545 349 aaPredicted RBP12.91□□□□□ -0.34
RPL28-201ENST00000344063 TSHZ3Q63HK5 1081 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms