RNA–Protein interactions for RNA: ENST00000340160.7

TSPAN18-201, Transcript of tetraspanin 18, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN18, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN18-201ENST00000340160 RTL1A6NKG5 1358 aa12.15□□□□□ -0.46
TSPAN18-201ENST00000340160 PTCD1O75127 700 aaKnown RBP12.15□□□□□ -0.46
TSPAN18-201ENST00000340160 CDC42BPGQ6DT37 1551 aa12.15□□□□□ -0.46
TSPAN18-201ENST00000340160 LRRC7Q96NW7 1537 aa12.15□□□□□ -0.46
TSPAN18-201ENST00000340160 HDGFL1Q5TGJ6 251 aa12.15□□□□□ -0.46
TSPAN18-201ENST00000340160 CARD10Q9BWT7 1032 aa12.15□□□□□ -0.46
TSPAN18-201ENST00000340160 RSPH6AQ9H0K4 717 aa12.15□□□□□ -0.46
TSPAN18-201ENST00000340160 MST1RQ04912 1400 aa12.15□□□□□ -0.47
TSPAN18-201ENST00000340160 RNF123Q5XPI4 1314 aa12.14□□□□□ -0.47
TSPAN18-201ENST00000340160 HTATSF1O43719 755 aaKnown RBP12.14□□□□□ -0.47
TSPAN18-201ENST00000340160 FKBP5Q13451 457 aaPredicted RBP12.14□□□□□ -0.47
TSPAN18-201ENST00000340160 LARP1Q6PKG0 1096 aaKnown RBP12.14□□□□□ -0.47
TSPAN18-201ENST00000340160 API5Q9BZZ5 524 aaKnown RBP12.14□□□□□ -0.47
TSPAN18-201ENST00000340160 IL13P35225 146 aa12.14□□□□□ -0.47
TSPAN18-201ENST00000340160 WDR17Q8IZU2 1322 aa12.14□□□□□ -0.47
TSPAN18-201ENST00000340160 NBPF6Q5VWK0 638 aa12.13□□□□□ -0.47
TSPAN18-201ENST00000340160 ITPRIPQ8IWB1 547 aa12.13□□□□□ -0.47
TSPAN18-201ENST00000340160 DCAF5Q96JK2 942 aa12.13□□□□□ -0.47
TSPAN18-201ENST00000340160 NBPF4Q96M43 638 aa12.13□□□□□ -0.47
TSPAN18-201ENST00000340160 TEX13AQ9BXU3 409 aaPredicted RBP12.13□□□□□ -0.47
TSPAN18-201ENST00000340160 TWISTNBQ3B726 338 aaPredicted RBP12.13□□□□□ -0.47
TSPAN18-201ENST00000340160 KIF6Q6ZMV9 814 aa12.13□□□□□ -0.47
TSPAN18-201ENST00000340160 AFF2P51816 1311 aa12.13□□□□□ -0.47
TSPAN18-201ENST00000340160 TAF7LQ5H9L4 462 aa12.13□□□□□ -0.47
TSPAN18-201ENST00000340160 RIC3Q7Z5B4 369 aa12.13□□□□□ -0.47
TSPAN18-201ENST00000340160 FMNL2Q96PY5 1086 aa12.13□□□□□ -0.47
TSPAN18-201ENST00000340160 DCTN1Q14203 1278 aa12.12□□□□□ -0.47
TSPAN18-201ENST00000340160 ZKSCAN2Q63HK3 967 aa12.12□□□□□ -0.47
TSPAN18-201ENST00000340160 USP31Q70CQ4 1352 aa12.12□□□□□ -0.47
TSPAN18-201ENST00000340160 AIMP1Q12904 312 aaKnown RBP12.12□□□□□ -0.47
TSPAN18-201ENST00000340160 ACSBG1Q96GR2 724 aa12.12□□□□□ -0.47
TSPAN18-201ENST00000340160 BCL2L13Q9BXK5 485 aa12.12□□□□□ -0.47
TSPAN18-201ENST00000340160 WWC1Q8IX03 1113 aa12.12□□□□□ -0.47
TSPAN18-201ENST00000340160 KIF16BQ96L93 1317 aa12.12□□□□□ -0.47
TSPAN18-201ENST00000340160 MYO5BQ9ULV0 1848 aa12.11□□□□□ -0.47
TSPAN18-201ENST00000340160 FAM83GA6ND36 823 aa12.11□□□□□ -0.47
TSPAN18-201ENST00000340160 IFT57Q9NWB7 429 aa12.11□□□□□ -0.47
TSPAN18-201ENST00000340160 CHMP3Q9Y3E7 222 aa12.11□□□□□ -0.47
TSPAN18-201ENST00000340160 EXOSC9Q06265 439 aaKnown RBP12.11□□□□□ -0.47
TSPAN18-201ENST00000340160 CLUAP1Q96AJ1 413 aa12.11□□□□□ -0.47
TSPAN18-201ENST00000340160 THUMPD2Q9BTF0 503 aaKnown RBP12.11□□□□□ -0.47
TSPAN18-201ENST00000340160 ERBB3P21860 1342 aa12.11□□□□□ -0.47
TSPAN18-201ENST00000340160 HSP90B1P14625 803 aaKnown RBP12.11□□□□□ -0.47
TSPAN18-201ENST00000340160 GSE1Q14687 1217 aa12.11□□□□□ -0.47
TSPAN18-201ENST00000340160 THRAP3Q9Y2W1 955 aaKnown RBP12.11□□□□□ -0.47
TSPAN18-201ENST00000340160 CPSF1Q10570 1443 aaKnown RBP12.1□□□□□ -0.47
TSPAN18-201ENST00000340160 CT47B1P0C2W7 299 aaPredicted RBP12.1□□□□□ -0.47
TSPAN18-201ENST00000340160 MTHFSDQ2M296 383 aaKnown RBP12.1□□□□□ -0.47
TSPAN18-201ENST00000340160 BCL11BQ9C0K0 894 aaPredicted RBP12.1□□□□□ -0.47
TSPAN18-201ENST00000340160 C9orf78Q9NZ63 289 aaPredicted RBP12.1□□□□□ -0.47
TSPAN18-201ENST00000340160 KAT6BQ8WYB5 2073 aa12.1□□□□□ -0.47
TSPAN18-201ENST00000340160 TSR2Q969E8 191 aaKnown RBP12.1□□□□□ -0.47
TSPAN18-201ENST00000340160 ZNF428Q96B54 188 aa12.1□□□□□ -0.47
TSPAN18-201ENST00000340160 IL27Q8NEV9 243 aa12.09□□□□□ -0.47
TSPAN18-201ENST00000340160 HMMRO75330 724 aa12.09□□□□□ -0.47
TSPAN18-201ENST00000340160 RBM6P78332 1123 aaKnown RBP12.09□□□□□ -0.47
TSPAN18-201ENST00000340160 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.08□□□□□ -0.48
TSPAN18-201ENST00000340160 CFAP44Q96MT7 982 aa12.08□□□□□ -0.48
TSPAN18-201ENST00000340160 BLMP54132 1417 aaPredicted RBP12.08□□□□□ -0.48
TSPAN18-201ENST00000340160 MAP3K5Q99683 1374 aa12.08□□□□□ -0.48
TSPAN18-201ENST00000340160 MIS18AQ9NYP9 233 aa12.08□□□□□ -0.48
TSPAN18-201ENST00000340160 ZNF142P52746 1687 aaPredicted RBP12.08□□□□□ -0.48
TSPAN18-201ENST00000340160 PDE4AP27815 886 aa12.07□□□□□ -0.48
TSPAN18-201ENST00000340160 AK7Q96M32 723 aa12.07□□□□□ -0.48
TSPAN18-201ENST00000340160 KLHL34Q8N239 644 aa12.07□□□□□ -0.48
TSPAN18-201ENST00000340160 SNRPA1P09661 255 aaKnown RBP12.07□□□□□ -0.48
TSPAN18-201ENST00000340160 NBPF14Q5TI25 921 aa12.07□□□□□ -0.48
TSPAN18-201ENST00000340160 DUSP27Q5VZP5 1158 aa12.07□□□□□ -0.48
TSPAN18-201ENST00000340160 RTN4Q9NQC3 1192 aaKnown RBP12.06□□□□□ -0.48
TSPAN18-201ENST00000340160 SLC4A2P04920 1241 aa12.06□□□□□ -0.48
TSPAN18-201ENST00000340160 BAG6P46379 1132 aa12.06□□□□□ -0.48
TSPAN18-201ENST00000340160 ZNF652Q9Y2D9 606 aa12.06□□□□□ -0.48
TSPAN18-201ENST00000340160 DCAF8L1A6NGE4 600 aa12.06□□□□□ -0.48
TSPAN18-201ENST00000340160 RNMTO43148 476 aaKnown RBP12.06□□□□□ -0.48
TSPAN18-201ENST00000340160 ZPR1O75312 459 aa12.06□□□□□ -0.48
TSPAN18-201ENST00000340160 MYL6BP14649 208 aa12.06□□□□□ -0.48
TSPAN18-201ENST00000340160 FAM196AQ6ZSG2 479 aa12.06□□□□□ -0.48
TSPAN18-201ENST00000340160 NFATC2IPQ8NCF5 419 aa12.06□□□□□ -0.48
TSPAN18-201ENST00000340160 CDCA7LQ96GN5 454 aa12.06□□□□□ -0.48
TSPAN18-201ENST00000340160 IL16Q14005 1332 aa12.05□□□□□ -0.48
TSPAN18-201ENST00000340160 KRT27Q7Z3Y8 459 aa12.05□□□□□ -0.48
TSPAN18-201ENST00000340160 SEPT12Q8IYM1 358 aa12.05□□□□□ -0.48
TSPAN18-201ENST00000340160 PHACTR3Q96KR7 559 aa12.05□□□□□ -0.48
TSPAN18-201ENST00000340160 GJD4Q96KN9 370 aaPredicted RBP12.05□□□□□ -0.48
TSPAN18-201ENST00000340160 ATP6V1AP38606 617 aa12.04□□□□□ -0.48
TSPAN18-201ENST00000340160 NCBP3Q53F19 620 aaKnown RBP12.04□□□□□ -0.48
TSPAN18-201ENST00000340160 DZIP1LQ8IYY4 767 aaKnown RBP12.04□□□□□ -0.48
TSPAN18-201ENST00000340160 IGSF1Q8N6C5 1336 aa12.04□□□□□ -0.48
TSPAN18-201ENST00000340160 POLR1AO95602 1720 aaPredicted RBP12.04□□□□□ -0.48
TSPAN18-201ENST00000340160 G3V3G9 751 aa12.04□□□□□ -0.48
TSPAN18-201ENST00000340160 PRIM1P49642 420 aaKnown RBP12.04□□□□□ -0.48
TSPAN18-201ENST00000340160 DCAF8Q5TAQ9 597 aa12.04□□□□□ -0.48
TSPAN18-201ENST00000340160 FAM43AQ8N2R8 423 aa12.04□□□□□ -0.48
TSPAN18-201ENST00000340160 BACH2Q9BYV9 841 aa12.04□□□□□ -0.48
TSPAN18-201ENST00000340160 USP19O94966 1318 aa12.04□□□□□ -0.48
TSPAN18-201ENST00000340160 CCDC27Q2M243 656 aa12.03□□□□□ -0.48
TSPAN18-201ENST00000340160 PNPLA6Q8IY17 1366 aa12.03□□□□□ -0.48
TSPAN18-201ENST00000340160 VPS72Q15906 364 aa12.03□□□□□ -0.48
TSPAN18-201ENST00000340160 A0A087WZG4 1122 aa12.03□□□□□ -0.48
TSPAN18-201ENST00000340160 ERVV-2B6SEH9 535 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms