RNA–Protein interactions for RNA: ENST00000338888.3

RUNX3-202, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX3, Length 2,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-202ENST00000338888 RPGRIP1LQ68CZ1 1315 aa24.89■■□□□ 1.58
RUNX3-202ENST00000338888 SLC52A1Q9NWF4 448 aa24.89■■□□□ 1.58
RUNX3-202ENST00000338888 FCHSD2O94868 740 aa24.89■■□□□ 1.57
RUNX3-202ENST00000338888 CCDC94Q9BW85 323 aaPredicted RBP24.89■■□□□ 1.57
RUNX3-202ENST00000338888 APBB1O00213 710 aa24.88■■□□□ 1.57
RUNX3-202ENST00000338888 TSC1Q92574 1164 aa24.88■■□□□ 1.57
RUNX3-202ENST00000338888 REREQ9P2R6 1566 aa24.88■■□□□ 1.57
RUNX3-202ENST00000338888 MBD3O95983 291 aa24.88■■□□□ 1.57
RUNX3-202ENST00000338888 PPLO60437 1756 aa24.87■■□□□ 1.57
RUNX3-202ENST00000338888 VGFO15240 615 aaPredicted RBP24.87■■□□□ 1.57
RUNX3-202ENST00000338888 CASC1Q6TDU7 716 aa24.87■■□□□ 1.57
RUNX3-202ENST00000338888 PHACTR3Q96KR7 559 aa24.87■■□□□ 1.57
RUNX3-202ENST00000338888 TSPY26PQ9H489 355 aa24.86■■□□□ 1.57
RUNX3-202ENST00000338888 STAG3Q9UJ98 1225 aa24.86■■□□□ 1.57
RUNX3-202ENST00000338888 SMARCA5O60264 1052 aaPredicted RBP24.85■■□□□ 1.57
RUNX3-202ENST00000338888 MYRIPQ8NFW9 859 aa24.85■■□□□ 1.57
RUNX3-202ENST00000338888 PIK3C2BO00750 1634 aa24.85■■□□□ 1.57
RUNX3-202ENST00000338888 HMOX1P09601 288 aa24.85■■□□□ 1.57
RUNX3-202ENST00000338888 FBLN1P23142 703 aa24.85■■□□□ 1.57
RUNX3-202ENST00000338888 TWISTNBQ3B726 338 aaPredicted RBP24.85■■□□□ 1.57
RUNX3-202ENST00000338888 ZNF830Q96NB3 372 aaPredicted RBP24.85■■□□□ 1.57
RUNX3-202ENST00000338888 MBIPQ9NS73 344 aa24.85■■□□□ 1.57
RUNX3-202ENST00000338888 API5Q9BZZ5 524 aaKnown RBP24.84■■□□□ 1.57
RUNX3-202ENST00000338888 STK26Q9P289 416 aa24.83■■□□□ 1.57
RUNX3-202ENST00000338888 PREX1Q8TCU6 1659 aa24.83■■□□□ 1.57
RUNX3-202ENST00000338888 REC8O95072 547 aa24.82■■□□□ 1.56
RUNX3-202ENST00000338888 GNAI1P63096 354 aa24.82■■□□□ 1.56
RUNX3-202ENST00000338888 C8orf58Q8NAV2 365 aa24.82■■□□□ 1.56
RUNX3-202ENST00000338888 NEK4P51957 841 aa24.82■■□□□ 1.56
RUNX3-202ENST00000338888 NFE2L2Q16236 605 aa24.82■■□□□ 1.56
RUNX3-202ENST00000338888 FOXD4L6Q3SYB3 417 aaPredicted RBP24.82■■□□□ 1.56
RUNX3-202ENST00000338888 FOXD4L3Q6VB84 417 aaPredicted RBP24.82■■□□□ 1.56
RUNX3-202ENST00000338888 TMX3Q96JJ7 454 aa24.82■■□□□ 1.56
RUNX3-202ENST00000338888 ESF1Q9H501 851 aaKnown RBP24.82■■□□□ 1.56
RUNX3-202ENST00000338888 LRRC7Q96NW7 1537 aa24.81■■□□□ 1.56
RUNX3-202ENST00000338888 PNPLA6Q8IY17 1366 aa24.81■■□□□ 1.56
RUNX3-202ENST00000338888 TERF2IPQ9NYB0 399 aa24.81■■□□□ 1.56
RUNX3-202ENST00000338888 NEXMIFQ5QGS0 1516 aa24.8■■□□□ 1.56
RUNX3-202ENST00000338888 ZSCAN20P17040 1043 aaPredicted RBP24.8■■□□□ 1.56
RUNX3-202ENST00000338888 DMTNQ08495 405 aa24.8■■□□□ 1.56
RUNX3-202ENST00000338888 ZNF710Q8N1W2 664 aa24.8■■□□□ 1.56
RUNX3-202ENST00000338888 IFT57Q9NWB7 429 aa24.8■■□□□ 1.56
RUNX3-202ENST00000338888 CLTCQ00610 1675 aaKnown RBP24.79■■□□□ 1.56
RUNX3-202ENST00000338888 AGLP35573 1532 aa24.79■■□□□ 1.56
RUNX3-202ENST00000338888 BRD1O95696 1058 aa24.79■■□□□ 1.56
RUNX3-202ENST00000338888 ERC2O15083 957 aa24.79■■□□□ 1.56
RUNX3-202ENST00000338888 FAM135BQ49AJ0 1406 aa24.78■■□□□ 1.56
RUNX3-202ENST00000338888 NOL8Q76FK4 1167 aaKnown RBP24.78■■□□□ 1.56
RUNX3-202ENST00000338888 C17orf53Q8N3J3 647 aaPredicted RBP24.78■■□□□ 1.56
RUNX3-202ENST00000338888 ANKRD44Q8N8A2 993 aa24.78■■□□□ 1.56
RUNX3-202ENST00000338888 GDPD2Q9HCC8 539 aa24.78■■□□□ 1.56
RUNX3-202ENST00000338888 KNDC1Q76NI1 1749 aa24.78■■□□□ 1.56
RUNX3-202ENST00000338888 FAM177BA6PVY3 158 aa24.78■■□□□ 1.56
RUNX3-202ENST00000338888 NOLC1Q14978 699 aaKnown RBP eCLIP24.78■■□□□ 1.56
RUNX3-202ENST00000338888 CBX1P83916 185 aa24.77■■□□□ 1.56
RUNX3-202ENST00000338888 MYO5BQ9ULV0 1848 aa24.77■■□□□ 1.56
RUNX3-202ENST00000338888 SYAP1Q96A49 352 aaPredicted RBP24.77■■□□□ 1.56
RUNX3-202ENST00000338888 MINK1Q8N4C8 1332 aaPredicted RBP24.76■■□□□ 1.55
RUNX3-202ENST00000338888 ZNF853P0CG23 659 aa24.76■■□□□ 1.55
RUNX3-202ENST00000338888 UTP14CQ5TAP6 766 aaKnown RBP24.76■■□□□ 1.55
RUNX3-202ENST00000338888 PIBF1Q8WXW3 757 aa24.76■■□□□ 1.55
RUNX3-202ENST00000338888 PRIMPOLQ96LW4 560 aa24.76■■□□□ 1.55
RUNX3-202ENST00000338888 TTC12Q9H892 705 aaPredicted RBP24.76■■□□□ 1.55
RUNX3-202ENST00000338888 PPP6R1Q9UPN7 881 aa24.76■■□□□ 1.55
RUNX3-202ENST00000338888 ARHGEF40Q8TER5 1519 aa24.76■■□□□ 1.55
RUNX3-202ENST00000338888 GADD45BO75293 160 aaPredicted RBP24.76■■□□□ 1.55
RUNX3-202ENST00000338888 TRHP20396 242 aaPredicted RBP24.76■■□□□ 1.55
RUNX3-202ENST00000338888 USP25Q9UHP3 1055 aa24.76■■□□□ 1.55
RUNX3-202ENST00000338888 ARHGEF28Q8N1W1 1705 aaKnown RBP24.75■■□□□ 1.55
RUNX3-202ENST00000338888 A0A0U1RQG5 324 aaPredicted RBP24.75■■□□□ 1.55
RUNX3-202ENST00000338888 CEP85Q6P2H3 762 aa24.74■■□□□ 1.55
RUNX3-202ENST00000338888 HMGN5P82970 282 aaKnown RBP24.74■■□□□ 1.55
RUNX3-202ENST00000338888 RPAP2Q8IXW5 612 aaPredicted RBP24.73■■□□□ 1.55
RUNX3-202ENST00000338888 POLKQ9UBT6 870 aa24.73■■□□□ 1.55
RUNX3-202ENST00000338888 TMEM131LA2VDJ0 1609 aa24.73■■□□□ 1.55
RUNX3-202ENST00000338888 TPRNQ4KMQ1 711 aa24.72■■□□□ 1.55
RUNX3-202ENST00000338888 ATP10DQ9P241 1426 aa24.71■■□□□ 1.55
RUNX3-202ENST00000338888 PPP4R3BQ5MIZ7 849 aa24.71■■□□□ 1.55
RUNX3-202ENST00000338888 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.71■■□□□ 1.55
RUNX3-202ENST00000338888 FAM83GA6ND36 823 aa24.71■■□□□ 1.55
RUNX3-202ENST00000338888 PLEKHG5O94827 1062 aa24.71■■□□□ 1.55
RUNX3-202ENST00000338888 HDGFL2Q7Z4V5 671 aaPredicted RBP24.71■■□□□ 1.55
RUNX3-202ENST00000338888 PHF14O94880 888 aa24.7■■□□□ 1.55
RUNX3-202ENST00000338888 GTF2F1P35269 517 aaKnown RBP eCLIP24.7■■□□□ 1.55
RUNX3-202ENST00000338888 KIF24Q5T7B8 1368 aa24.7■■□□□ 1.54
RUNX3-202ENST00000338888 ADCY5O95622 1261 aa24.7■■□□□ 1.54
RUNX3-202ENST00000338888 CUL4AQ13619 759 aa24.7■■□□□ 1.54
RUNX3-202ENST00000338888 ATP2B3Q16720 1220 aa24.7■■□□□ 1.54
RUNX3-202ENST00000338888 USP48Q86UV5 1035 aa24.7■■□□□ 1.54
RUNX3-202ENST00000338888 CD163L1Q9NR16 1453 aa24.7■■□□□ 1.54
RUNX3-202ENST00000338888 KIF3AQ9Y496 699 aa24.69■■□□□ 1.54
RUNX3-202ENST00000338888 DCTN1Q14203 1278 aa24.69■■□□□ 1.54
RUNX3-202ENST00000338888 MCM2P49736 904 aa24.68■■□□□ 1.54
RUNX3-202ENST00000338888 KRT24Q2M2I5 525 aa24.68■■□□□ 1.54
RUNX3-202ENST00000338888 PALD1Q9ULE6 856 aa24.68■■□□□ 1.54
RUNX3-202ENST00000338888 UVSSAQ2YD98 709 aa24.68■■□□□ 1.54
RUNX3-202ENST00000338888 PLPPR3Q6T4P5 718 aa24.68■■□□□ 1.54
RUNX3-202ENST00000338888 CABP1Q9NZU7 370 aa24.68■■□□□ 1.54
RUNX3-202ENST00000338888 FAM184AQ8NB25 1140 aa24.67■■□□□ 1.54
RUNX3-202ENST00000338888 MEIS3Q99687 375 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms