RNA–Protein interactions for RNA: ENST00000338663.11

SLC3A2-201, Transcript of solute carrier family 3 member 2, humanhuman

TSL 1 (best) BASIC

Gene SLC3A2, Length 1,904 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-201ENST00000338663 NCAPD2Q15021 1401 aa22.13■■□□□ 1.13
SLC3A2-201ENST00000338663 ABCC6O95255 1503 aa22.12■■□□□ 1.13
SLC3A2-201ENST00000338663 FRAT1Q92837 279 aaPredicted RBP22.12■■□□□ 1.13
SLC3A2-201ENST00000338663 NHSL1Q5SYE7 1610 aa22.12■■□□□ 1.13
SLC3A2-201ENST00000338663 SPATA31A3Q5VYP0 1347 aa22.12■■□□□ 1.13
SLC3A2-201ENST00000338663 COL18A1P39060 1754 aa22.11■■□□□ 1.13
SLC3A2-201ENST00000338663 PLEKHG5O94827 1062 aa22.11■■□□□ 1.13
SLC3A2-201ENST00000338663 ZNF428Q96B54 188 aa22.11■■□□□ 1.13
SLC3A2-201ENST00000338663 SLAIN2Q9P270 581 aa22.11■■□□□ 1.13
SLC3A2-201ENST00000338663 LMO7Q8WWI1 1683 aa22.11■■□□□ 1.13
SLC3A2-201ENST00000338663 SMC4Q9NTJ3 1288 aa22.1■■□□□ 1.13
SLC3A2-201ENST00000338663 CRB1P82279 1406 aa22.1■■□□□ 1.13
SLC3A2-201ENST00000338663 MCM10Q7L590 875 aa22.1■■□□□ 1.13
SLC3A2-201ENST00000338663 FAM208AQ9UK61 1670 aaKnown RBP22.09■■□□□ 1.13
SLC3A2-201ENST00000338663 NBPF6Q5VWK0 638 aa22.09■■□□□ 1.13
SLC3A2-201ENST00000338663 USHBP1Q8N6Y0 703 aa22.09■■□□□ 1.13
SLC3A2-201ENST00000338663 SSH1Q8WYL5 1049 aa22.09■■□□□ 1.13
SLC3A2-201ENST00000338663 NBPF4Q96M43 638 aa22.09■■□□□ 1.13
SLC3A2-201ENST00000338663 ALDH1L2Q3SY69 923 aa22.08■■□□□ 1.13
SLC3A2-201ENST00000338663 CENPQQ7L2Z9 268 aaPredicted RBP22.08■■□□□ 1.12
SLC3A2-201ENST00000338663 ABCA3Q99758 1704 aa22.07■■□□□ 1.12
SLC3A2-201ENST00000338663 KDM2BQ8NHM5 1336 aa22.07■■□□□ 1.12
SLC3A2-201ENST00000338663 RTF1Q92541 710 aaKnown RBP22.07■■□□□ 1.12
SLC3A2-201ENST00000338663 HTATSF1O43719 755 aaKnown RBP22.06■■□□□ 1.12
SLC3A2-201ENST00000338663 PANK1Q8TE04 598 aa22.06■■□□□ 1.12
SLC3A2-201ENST00000338663 ANKRD24Q8TF21 1146 aa22.06■■□□□ 1.12
SLC3A2-201ENST00000338663 MAP3K5Q99683 1374 aa22.06■■□□□ 1.12
SLC3A2-201ENST00000338663 SOS2Q07890 1332 aaPredicted RBP22.06■■□□□ 1.12
SLC3A2-201ENST00000338663 KIF16BQ96L93 1317 aa22.06■■□□□ 1.12
SLC3A2-201ENST00000338663 ZKSCAN2Q63HK3 967 aa22.06■■□□□ 1.12
SLC3A2-201ENST00000338663 CHL1O00533 1208 aa22.05■■□□□ 1.12
SLC3A2-201ENST00000338663 LRRC59Q96AG4 307 aaKnown RBP22.05■■□□□ 1.12
SLC3A2-201ENST00000338663 VAMP4O75379 141 aa22.04■■□□□ 1.12
SLC3A2-201ENST00000338663 ZC3H6P61129 1189 aaKnown RBP22.04■■□□□ 1.12
SLC3A2-201ENST00000338663 AXIN2Q9Y2T1 843 aa22.04■■□□□ 1.12
SLC3A2-201ENST00000338663 ERBB3P21860 1342 aa22.04■■□□□ 1.12
SLC3A2-201ENST00000338663 GNAT3A8MTJ3 354 aa22.04■■□□□ 1.12
SLC3A2-201ENST00000338663 COG6Q9Y2V7 657 aa22.04■■□□□ 1.12
SLC3A2-201ENST00000338663 VIRMAQ69YN4 1812 aaKnown RBP22.03■■□□□ 1.12
SLC3A2-201ENST00000338663 BRPF1P55201 1214 aaPredicted RBP22.03■■□□□ 1.12
SLC3A2-201ENST00000338663 TSPYL6Q8N831 410 aa22.03■■□□□ 1.12
SLC3A2-201ENST00000338663 TNNQ9UQP3 1299 aa22.03■■□□□ 1.12
SLC3A2-201ENST00000338663 CPDO75976 1380 aa22.02■■□□□ 1.12
SLC3A2-201ENST00000338663 RLBP1P12271 317 aa22.02■■□□□ 1.12
SLC3A2-201ENST00000338663 TWISTNBQ3B726 338 aaPredicted RBP22.02■■□□□ 1.12
SLC3A2-201ENST00000338663 KIAA0232Q92628 1395 aa22.02■■□□□ 1.12
SLC3A2-201ENST00000338663 C8orf58Q8NAV2 365 aa22.01■■□□□ 1.11
SLC3A2-201ENST00000338663 CABLES1Q8TDN4 633 aa22.01■■□□□ 1.11
SLC3A2-201ENST00000338663 TRIM27P14373 513 aa22■■□□□ 1.11
SLC3A2-201ENST00000338663 AAMPQ13685 434 aa22■■□□□ 1.11
SLC3A2-201ENST00000338663 ATF7IPQ6VMQ6 1270 aa22■■□□□ 1.11
SLC3A2-201ENST00000338663 DZIP1LQ8IYY4 767 aaKnown RBP22■■□□□ 1.11
SLC3A2-201ENST00000338663 FTSJ3Q8IY81 847 aaKnown RBP21.99■■□□□ 1.11
SLC3A2-201ENST00000338663 CLUAP1Q96AJ1 413 aa21.99■■□□□ 1.11
SLC3A2-201ENST00000338663 NOB1Q9ULX3 412 aaKnown RBP21.99■■□□□ 1.11
SLC3A2-201ENST00000338663 LTBP4Q8N2S1 1624 aa21.99■■□□□ 1.11
SLC3A2-201ENST00000338663 FAM161AQ3B820 660 aa21.98■■□□□ 1.11
SLC3A2-201ENST00000338663 IPO8O15397 1037 aaKnown RBP21.98■■□□□ 1.11
SLC3A2-201ENST00000338663 ELL2O00472 640 aaPredicted RBP21.97■■□□□ 1.11
SLC3A2-201ENST00000338663 HAP1P54257 671 aaPredicted RBP21.97■■□□□ 1.11
SLC3A2-201ENST00000338663 MVPQ14764 893 aaKnown RBP21.97■■□□□ 1.11
SLC3A2-201ENST00000338663 DAXXQ9UER7 740 aaPredicted RBP21.97■■□□□ 1.11
SLC3A2-201ENST00000338663 GSE1Q14687 1217 aa21.96■■□□□ 1.11
SLC3A2-201ENST00000338663 MRPL50Q8N5N7 158 aaKnown RBP21.96■■□□□ 1.11
SLC3A2-201ENST00000338663 ROBO1Q9Y6N7 1651 aa21.96■■□□□ 1.11
SLC3A2-201ENST00000338663 CEMIPQ8WUJ3 1361 aa21.96■■□□□ 1.11
SLC3A2-201ENST00000338663 TSPYL4Q9UJ04 414 aa21.96■■□□□ 1.11
SLC3A2-201ENST00000338663 AMOTQ4VCS5 1084 aa21.95■■□□□ 1.1
SLC3A2-201ENST00000338663 PLEKHO1Q53GL0 409 aaPredicted RBP21.95■■□□□ 1.1
SLC3A2-201ENST00000338663 IL17REQ8NFR9 667 aa21.95■■□□□ 1.1
SLC3A2-201ENST00000338663 KDM3BQ7LBC6 1761 aa21.95■■□□□ 1.1
SLC3A2-201ENST00000338663 ADAMTS7Q9UKP4 1686 aa21.94■■□□□ 1.1
SLC3A2-201ENST00000338663 BABAM1Q9NWV8 329 aa21.93■■□□□ 1.1
SLC3A2-201ENST00000338663 OVOS2A0A0G2JMS6 1433 aa21.93■■□□□ 1.1
SLC3A2-201ENST00000338663 CHRNA2Q15822 529 aa21.92■■□□□ 1.1
SLC3A2-201ENST00000338663 KRT24Q2M2I5 525 aa21.92■■□□□ 1.1
SLC3A2-201ENST00000338663 AKAP4Q5JQC9 854 aa21.92■■□□□ 1.1
SLC3A2-201ENST00000338663 ZNF530Q6P9A1 599 aaPredicted RBP21.92■■□□□ 1.1
SLC3A2-201ENST00000338663 ARHGAP45Q92619 1136 aa21.92■■□□□ 1.1
SLC3A2-201ENST00000338663 PLEKHG2Q9H7P9 1386 aa21.92■■□□□ 1.1
SLC3A2-201ENST00000338663 MIS18AQ9NYP9 233 aa21.92■■□□□ 1.1
SLC3A2-201ENST00000338663 AHDC1Q5TGY3 1603 aaPredicted RBP21.91■■□□□ 1.1
SLC3A2-201ENST00000338663 PKD1L3Q7Z443 1732 aa21.91■■□□□ 1.1
SLC3A2-201ENST00000338663 NFKBIBQ15653 356 aa21.91■■□□□ 1.1
SLC3A2-201ENST00000338663 IL27Q8NEV9 243 aa21.91■■□□□ 1.1
SLC3A2-201ENST00000338663 SIPA1L3O60292 1781 aaPredicted RBP21.91■■□□□ 1.1
SLC3A2-201ENST00000338663 NLRP2Q9NX02 1062 aa21.9■■□□□ 1.1
SLC3A2-201ENST00000338663 DDX19BQ9UMR2 479 aa21.9■■□□□ 1.1
SLC3A2-201ENST00000338663 TAF7Q15545 349 aaPredicted RBP21.89■■□□□ 1.09
SLC3A2-201ENST00000338663 MEGF6O75095 1541 aa21.88■■□□□ 1.09
SLC3A2-201ENST00000338663 ITPRIPQ8IWB1 547 aa21.88■■□□□ 1.09
SLC3A2-201ENST00000338663 TMEM57Q8N5G2 664 aa21.88■■□□□ 1.09
SLC3A2-201ENST00000338663 PARP4Q9UKK3 1724 aaKnown RBP21.88■■□□□ 1.09
SLC3A2-201ENST00000338663 CSB-PGBD3P0DP91 1061 aa21.88■■□□□ 1.09
SLC3A2-201ENST00000338663 C8orf34Q49A92 452 aa21.88■■□□□ 1.09
SLC3A2-201ENST00000338663 C1orf141Q5JVX7 400 aa21.88■■□□□ 1.09
SLC3A2-201ENST00000338663 PRDM11Q9NQV5 511 aa21.88■■□□□ 1.09
SLC3A2-201ENST00000338663 CACNA1FO60840 1977 aa21.87■■□□□ 1.09
SLC3A2-201ENST00000338663 SCN11AQ9UI33 1791 aa21.87■■□□□ 1.09
SLC3A2-201ENST00000338663 RAPGEF4Q8WZA2 1011 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms