RNA–Protein interactions for RNA: ENST00000335643.12

KATNA1-201, Transcript of katanin catalytic subunit A1, humanhuman

TSL 1 (best) BASIC

Gene KATNA1, Length 1,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNA1-201ENST00000335643 BCL11BQ9C0K0 894 aaPredicted RBP20.46■□□□□ 0.87
KATNA1-201ENST00000335643 MORC1Q86VD1 984 aa20.45■□□□□ 0.86
KATNA1-201ENST00000335643 DDX54Q8TDD1 881 aaKnown RBP20.45■□□□□ 0.86
KATNA1-201ENST00000335643 DOT1LQ8TEK3 1739 aa20.45■□□□□ 0.86
KATNA1-201ENST00000335643 BTAF1O14981 1849 aa20.43■□□□□ 0.86
KATNA1-201ENST00000335643 PARD3Q8TEW0 1356 aa20.43■□□□□ 0.86
KATNA1-201ENST00000335643 PSDA5PKW4 1024 aaPredicted RBP20.43■□□□□ 0.86
KATNA1-201ENST00000335643 EIF4A2Q14240 407 aaKnown RBP20.42■□□□□ 0.86
KATNA1-201ENST00000335643 EYA1Q99502 592 aa20.42■□□□□ 0.86
KATNA1-201ENST00000335643 PKD1L3Q7Z443 1732 aa20.42■□□□□ 0.86
KATNA1-201ENST00000335643 ZCRB1Q8TBF4 217 aaKnown RBP20.42■□□□□ 0.86
KATNA1-201ENST00000335643 PLSCR1O15162 318 aa20.4■□□□□ 0.86
KATNA1-201ENST00000335643 CC2D1BQ5T0F9 858 aaKnown RBP20.4■□□□□ 0.86
KATNA1-201ENST00000335643 PROM2Q8N271 834 aa20.4■□□□□ 0.86
KATNA1-201ENST00000335643 RAPGEF4Q8WZA2 1011 aa20.4■□□□□ 0.86
KATNA1-201ENST00000335643 KAT6BQ8WYB5 2073 aa20.39■□□□□ 0.85
KATNA1-201ENST00000335643 TATP17735 454 aaPredicted RBP20.38■□□□□ 0.85
KATNA1-201ENST00000335643 R3HDM1Q15032 1099 aaKnown RBP20.38■□□□□ 0.85
KATNA1-201ENST00000335643 TOGARAM1Q9Y4F4 1720 aa20.37■□□□□ 0.85
KATNA1-201ENST00000335643 CNGB1Q14028 1251 aaPredicted RBP20.37■□□□□ 0.85
KATNA1-201ENST00000335643 IGSF1Q8N6C5 1336 aa20.35■□□□□ 0.85
KATNA1-201ENST00000335643 CYP27B1O15528 508 aa20.35■□□□□ 0.85
KATNA1-201ENST00000335643 ANO8Q9HCE9 1232 aaPredicted RBP20.34■□□□□ 0.85
KATNA1-201ENST00000335643 NPC1L1Q9UHC9 1359 aa20.34■□□□□ 0.85
KATNA1-201ENST00000335643 PCDH11XQ9BZA7 1347 aa20.33■□□□□ 0.85
KATNA1-201ENST00000335643 PCDH11YQ9BZA8 1340 aa20.33■□□□□ 0.85
KATNA1-201ENST00000335643 PRIM1P49642 420 aaKnown RBP20.33■□□□□ 0.84
KATNA1-201ENST00000335643 TXNRD1Q16881 649 aa20.33■□□□□ 0.84
KATNA1-201ENST00000335643 MTHFSP49914 203 aa20.32■□□□□ 0.84
KATNA1-201ENST00000335643 PAPPAQ13219 1627 aa20.31■□□□□ 0.84
KATNA1-201ENST00000335643 AEBP1Q8IUX7 1158 aa20.31■□□□□ 0.84
KATNA1-201ENST00000335643 SYTL4Q96C24 671 aaPredicted RBP20.31■□□□□ 0.84
KATNA1-201ENST00000335643 ITGB4P16144 1822 aa20.3■□□□□ 0.84
KATNA1-201ENST00000335643 IL13P35225 146 aa20.3■□□□□ 0.84
KATNA1-201ENST00000335643 LY75O60449 1722 aa20.3■□□□□ 0.84
KATNA1-201ENST00000335643 LRP5O75197 1615 aa20.29■□□□□ 0.84
KATNA1-201ENST00000335643 COL3A1P02461 1466 aaPredicted RBP20.28■□□□□ 0.84
KATNA1-201ENST00000335643 NBPF14Q5TI25 921 aa20.27■□□□□ 0.84
KATNA1-201ENST00000335643 LRRC4BQ9NT99 713 aa20.27■□□□□ 0.84
KATNA1-201ENST00000335643 SPG7Q9UQ90 795 aa20.26■□□□□ 0.83
KATNA1-201ENST00000335643 CASZ1Q86V15 1759 aa20.26■□□□□ 0.83
KATNA1-201ENST00000335643 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.25■□□□□ 0.83
KATNA1-201ENST00000335643 KDRP35968 1356 aa20.25■□□□□ 0.83
KATNA1-201ENST00000335643 KCNQ4P56696 695 aa20.25■□□□□ 0.83
KATNA1-201ENST00000335643 NKX1-1Q15270 411 aaPredicted RBP20.25■□□□□ 0.83
KATNA1-201ENST00000335643 SULT6B1Q6IMI4 303 aa20.25■□□□□ 0.83
KATNA1-201ENST00000335643 PDGFDQ9GZP0 370 aaPredicted RBP20.25■□□□□ 0.83
KATNA1-201ENST00000335643 PHKG2P15735 406 aa20.24■□□□□ 0.83
KATNA1-201ENST00000335643 PLEKHG2Q9H7P9 1386 aa20.22■□□□□ 0.83
KATNA1-201ENST00000335643 MPRIPQ6WCQ1 1025 aa20.21■□□□□ 0.83
KATNA1-201ENST00000335643 TUBGCP6Q96RT7 1819 aa20.21■□□□□ 0.83
KATNA1-201ENST00000335643 ZNF827Q17R98 1081 aa20.21■□□□□ 0.83
KATNA1-201ENST00000335643 IFNL2Q8IZJ0 200 aa20.21■□□□□ 0.83
KATNA1-201ENST00000335643 HMOX1P09601 288 aa20.2■□□□□ 0.82
KATNA1-201ENST00000335643 SLC15A2Q16348 729 aa20.2■□□□□ 0.82
KATNA1-201ENST00000335643 DIAPH1O60610 1272 aaKnown RBP20.19■□□□□ 0.82
KATNA1-201ENST00000335643 PIGBQ92521 554 aa20.19■□□□□ 0.82
KATNA1-201ENST00000335643 KDM6AO15550 1401 aaPredicted RBP20.19■□□□□ 0.82
KATNA1-201ENST00000335643 STK32BQ9NY57 414 aa20.18■□□□□ 0.82
KATNA1-201ENST00000335643 PPP2R1AP30153 589 aa20.17■□□□□ 0.82
KATNA1-201ENST00000335643 C5P01031 1676 aa20.17■□□□□ 0.82
KATNA1-201ENST00000335643 TAF1LQ8IZX4 1826 aa20.17■□□□□ 0.82
KATNA1-201ENST00000335643 PLEKHO1Q53GL0 409 aaPredicted RBP20.17■□□□□ 0.82
KATNA1-201ENST00000335643 SLC27A3Q5K4L6 730 aa20.17■□□□□ 0.82
KATNA1-201ENST00000335643 ZNF530Q6P9A1 599 aaPredicted RBP20.17■□□□□ 0.82
KATNA1-201ENST00000335643 PALLDQ8WX93 1383 aa20.16■□□□□ 0.82
KATNA1-201ENST00000335643 AKT1S1Q96B36 256 aa20.16■□□□□ 0.82
KATNA1-201ENST00000335643 QSER1Q2KHR3 1735 aa20.15■□□□□ 0.82
KATNA1-201ENST00000335643 VIRMAQ69YN4 1812 aaKnown RBP20.15■□□□□ 0.82
KATNA1-201ENST00000335643 AMOTQ4VCS5 1084 aa20.15■□□□□ 0.82
KATNA1-201ENST00000335643 CCNL1Q9UK58 526 aaPredicted RBP20.15■□□□□ 0.82
KATNA1-201ENST00000335643 SCN11AQ9UI33 1791 aa20.14■□□□□ 0.81
KATNA1-201ENST00000335643 TMOD3Q9NYL9 352 aa20.12■□□□□ 0.81
KATNA1-201ENST00000335643 ASAP1Q9ULH1 1129 aa20.12■□□□□ 0.81
KATNA1-201ENST00000335643 U2SURPO15042 1029 aaKnown RBP20.12■□□□□ 0.81
KATNA1-201ENST00000335643 ZBTB7AO95365 584 aa20.12■□□□□ 0.81
KATNA1-201ENST00000335643 DDX10Q13206 875 aaKnown RBP20.12■□□□□ 0.81
KATNA1-201ENST00000335643 DCAF5Q96JK2 942 aa20.12■□□□□ 0.81
KATNA1-201ENST00000335643 MTHFSDQ2M296 383 aaKnown RBP20.1■□□□□ 0.81
KATNA1-201ENST00000335643 ADAMTS7Q9UKP4 1686 aa20.09■□□□□ 0.81
KATNA1-201ENST00000335643 C1orf141Q5JVX7 400 aa20.09■□□□□ 0.81
KATNA1-201ENST00000335643 ATG3Q9NT62 314 aa20.09■□□□□ 0.81
KATNA1-201ENST00000335643 C4BP0C0L5 1744 aa20.09■□□□□ 0.81
KATNA1-201ENST00000335643 PNPLA7Q6ZV29 1317 aa20.09■□□□□ 0.81
KATNA1-201ENST00000335643 ERVV-2B6SEH9 535 aa20.08■□□□□ 0.81
KATNA1-201ENST00000335643 HSP90AB1P08238 724 aaKnown RBP20.08■□□□□ 0.81
KATNA1-201ENST00000335643 SPON1Q9HCB6 807 aa20.08■□□□□ 0.8
KATNA1-201ENST00000335643 ATF5Q9Y2D1 282 aaPredicted RBP20.08■□□□□ 0.8
KATNA1-201ENST00000335643 AKAP4Q5JQC9 854 aa20.07■□□□□ 0.8
KATNA1-201ENST00000335643 SMARCC1Q92922 1105 aaPredicted RBP20.07■□□□□ 0.8
KATNA1-201ENST00000335643 CFAP53Q96M91 514 aa20.07■□□□□ 0.8
KATNA1-201ENST00000335643 LGR6Q9HBX8 967 aa20.07■□□□□ 0.8
KATNA1-201ENST00000335643 UTRNP46939 3433 aa20.07■□□□□ 0.8
KATNA1-201ENST00000335643 LOC102724428A0A0B4J2F2 783 aa20.06■□□□□ 0.8
KATNA1-201ENST00000335643 PTGER2P43116 358 aa20.06■□□□□ 0.8
KATNA1-201ENST00000335643 SIK1P57059 783 aa20.06■□□□□ 0.8
KATNA1-201ENST00000335643 AMIGO3Q86WK7 504 aa20.06■□□□□ 0.8
KATNA1-201ENST00000335643 TFCP2L1Q9NZI6 479 aa20.06■□□□□ 0.8
KATNA1-201ENST00000335643 SLC4A9Q96Q91 983 aa20.05■□□□□ 0.8
KATNA1-201ENST00000335643 GOLGB1Q14789 3259 aaKnown RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms