RNA–Protein interactions for RNA: ENST00000334557.10

FMR1-202, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best) BASIC

Gene FMR1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-202ENST00000334557 ANKRD36BQ8N2N9 1353 aa28.44■■■□□ 2.14
FMR1-202ENST00000334557 MAP3K19Q56UN5 1328 aa28.43■■■□□ 2.14
FMR1-202ENST00000334557 QSER1Q2KHR3 1735 aa28.43■■■□□ 2.14
FMR1-202ENST00000334557 HOXC9P31274 260 aa28.43■■■□□ 2.14
FMR1-202ENST00000334557 FAM208AQ9UK61 1670 aaKnown RBP28.4■■■□□ 2.14
FMR1-202ENST00000334557 ZCRB1Q8TBF4 217 aaKnown RBP28.4■■■□□ 2.14
FMR1-202ENST00000334557 DOT1LQ8TEK3 1739 aa28.4■■■□□ 2.14
FMR1-202ENST00000334557 RGPD2P0DJD1 1756 aa28.39■■■□□ 2.14
FMR1-202ENST00000334557 MEGF6O75095 1541 aa28.38■■■□□ 2.13
FMR1-202ENST00000334557 YBX3P16989 372 aaKnown RBP eCLIP28.38■■■□□ 2.13
FMR1-202ENST00000334557 AMPHP49418 695 aa28.38■■■□□ 2.13
FMR1-202ENST00000334557 COL23A1Q86Y22 540 aaPredicted RBP28.38■■■□□ 2.13
FMR1-202ENST00000334557 PUS7Q96PZ0 661 aaKnown RBP28.38■■■□□ 2.13
FMR1-202ENST00000334557 LY75O60449 1722 aa28.38■■■□□ 2.13
FMR1-202ENST00000334557 SHANK3Q9BYB0 1731 aa28.38■■■□□ 2.13
FMR1-202ENST00000334557 COG3Q96JB2 828 aa28.37■■■□□ 2.13
FMR1-202ENST00000334557 TESK2Q96S53 571 aa28.37■■■□□ 2.13
FMR1-202ENST00000334557 CCNL1Q9UK58 526 aaPredicted RBP28.37■■■□□ 2.13
FMR1-202ENST00000334557 NBPF6Q5VWK0 638 aa28.36■■■□□ 2.13
FMR1-202ENST00000334557 NBPF4Q96M43 638 aa28.36■■■□□ 2.13
FMR1-202ENST00000334557 GIGYF1O75420 1035 aaPredicted RBP28.35■■■□□ 2.13
FMR1-202ENST00000334557 MSH5O43196 834 aa28.34■■■□□ 2.13
FMR1-202ENST00000334557 USHBP1Q8N6Y0 703 aa28.34■■■□□ 2.13
FMR1-202ENST00000334557 RRS1Q15050 365 aaKnown RBP28.33■■■□□ 2.13
FMR1-202ENST00000334557 MSL1Q68DK7 614 aa28.33■■■□□ 2.13
FMR1-202ENST00000334557 ST20-MTHFSA0A0A6YYL1 179 aa28.32■■■□□ 2.12
FMR1-202ENST00000334557 USP47Q96K76 1375 aa28.29■■■□□ 2.12
FMR1-202ENST00000334557 CEP350Q5VT06 3117 aa28.29■■■□□ 2.12
FMR1-202ENST00000334557 FYB1O15117 783 aa28.26■■■□□ 2.11
FMR1-202ENST00000334557 GGNBP2Q9H3C7 697 aa28.26■■■□□ 2.11
FMR1-202ENST00000334557 TONSLQ96HA7 1378 aa28.24■■■□□ 2.11
FMR1-202ENST00000334557 GRIN3BO60391 1043 aa28.24■■■□□ 2.11
FMR1-202ENST00000334557 HSP90AB2PQ58FF8 381 aa28.22■■■□□ 2.11
FMR1-202ENST00000334557 RAPGEF4Q8WZA2 1011 aa28.22■■■□□ 2.11
FMR1-202ENST00000334557 RTL1A6NKG5 1358 aa28.22■■■□□ 2.11
FMR1-202ENST00000334557 SMIM5Q71RC9 77 aa28.21■■■□□ 2.11
FMR1-202ENST00000334557 AMIGO3Q86WK7 504 aa28.21■■■□□ 2.11
FMR1-202ENST00000334557 CGNL1Q0VF96 1302 aa28.19■■■□□ 2.1
FMR1-202ENST00000334557 TATP17735 454 aaPredicted RBP28.19■■■□□ 2.1
FMR1-202ENST00000334557 MPRIPQ6WCQ1 1025 aa28.19■■■□□ 2.1
FMR1-202ENST00000334557 C5P01031 1676 aa28.18■■■□□ 2.1
FMR1-202ENST00000334557 PALLDQ8WX93 1383 aa28.17■■■□□ 2.1
FMR1-202ENST00000334557 CYP27B1O15528 508 aa28.17■■■□□ 2.1
FMR1-202ENST00000334557 CD2APQ9Y5K6 639 aa28.17■■■□□ 2.1
FMR1-202ENST00000334557 ATP10DQ9P241 1426 aa28.17■■■□□ 2.1
FMR1-202ENST00000334557 PCDH11XQ9BZA7 1347 aa28.15■■■□□ 2.1
FMR1-202ENST00000334557 PCDH11YQ9BZA8 1340 aa28.15■■■□□ 2.1
FMR1-202ENST00000334557 TAF1LQ8IZX4 1826 aa28.13■■■□□ 2.09
FMR1-202ENST00000334557 INSRP06213 1382 aa28.13■■■□□ 2.09
FMR1-202ENST00000334557 WWC3Q9ULE0 1092 aa28.13■■■□□ 2.09
FMR1-202ENST00000334557 SMG6Q86US8 1419 aaKnown RBP28.12■■■□□ 2.09
FMR1-202ENST00000334557 IFFO2Q5TF58 517 aa28.11■■■□□ 2.09
FMR1-202ENST00000334557 FLAD1Q8NFF5 587 aa28.11■■■□□ 2.09
FMR1-202ENST00000334557 TOGARAM1Q9Y4F4 1720 aa28.1■■■□□ 2.09
FMR1-202ENST00000334557 ZNF526Q8TF50 670 aaPredicted RBP28.1■■■□□ 2.09
FMR1-202ENST00000334557 PIGBQ92521 554 aa28.1■■■□□ 2.09
FMR1-202ENST00000334557 PHF14O94880 888 aa28.09■■■□□ 2.09
FMR1-202ENST00000334557 C4BP0C0L5 1744 aa28.09■■■□□ 2.09
FMR1-202ENST00000334557 SLC24A1O60721 1099 aa28.08■■■□□ 2.09
FMR1-202ENST00000334557 AK7Q96M32 723 aa28.08■■■□□ 2.09
FMR1-202ENST00000334557 GPBP1L1Q9HC44 474 aaPredicted RBP28.08■■■□□ 2.09
FMR1-202ENST00000334557 EMILIN1Q9Y6C2 1016 aa28.08■■■□□ 2.09
FMR1-202ENST00000334557 FLT4P35916 1363 aa28.08■■■□□ 2.09
FMR1-202ENST00000334557 ITGB4P16144 1822 aa28.06■■■□□ 2.08
FMR1-202ENST00000334557 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.06■■■□□ 2.08
FMR1-202ENST00000334557 TMF1P82094 1093 aa28.06■■■□□ 2.08
FMR1-202ENST00000334557 CARD14Q9BXL6 1004 aa28.06■■■□□ 2.08
FMR1-202ENST00000334557 ADCY9O60503 1353 aa28.06■■■□□ 2.08
FMR1-202ENST00000334557 IGSF1Q8N6C5 1336 aa28.05■■■□□ 2.08
FMR1-202ENST00000334557 SMARCC1Q92922 1105 aaPredicted RBP28.05■■■□□ 2.08
FMR1-202ENST00000334557 LINC00116Q8NCU8 138 aa28.04■■■□□ 2.08
FMR1-202ENST00000334557 UBR3Q6ZT12 1888 aa28.02■■■□□ 2.08
FMR1-202ENST00000334557 NKX1-1Q15270 411 aaPredicted RBP28.02■■■□□ 2.08
FMR1-202ENST00000334557 KIF24Q5T7B8 1368 aa28.01■■■□□ 2.07
FMR1-202ENST00000334557 KIF20BQ96Q89 1820 aa28.01■■■□□ 2.07
FMR1-202ENST00000334557 LOC102724428A0A0B4J2F2 783 aa28■■■□□ 2.07
FMR1-202ENST00000334557 PPM1GO15355 546 aaPredicted RBP28■■■□□ 2.07
FMR1-202ENST00000334557 SIK1P57059 783 aa28■■■□□ 2.07
FMR1-202ENST00000334557 PKD1L3Q7Z443 1732 aa28■■■□□ 2.07
FMR1-202ENST00000334557 MAP2P11137 1827 aaKnown RBP27.99■■■□□ 2.07
FMR1-202ENST00000334557 HMGB2P26583 209 aaKnown RBP27.99■■■□□ 2.07
FMR1-202ENST00000334557 ITPK1Q13572 414 aa27.99■■■□□ 2.07
FMR1-202ENST00000334557 ASAP1Q9ULH1 1129 aa27.99■■■□□ 2.07
FMR1-202ENST00000334557 HSPA6P17066 643 aa27.97■■■□□ 2.07
FMR1-202ENST00000334557 SSFA2P28290 1259 aa27.97■■■□□ 2.07
FMR1-202ENST00000334557 NCAPD2Q15021 1401 aa27.97■■■□□ 2.07
FMR1-202ENST00000334557 EYA1Q99502 592 aa27.96■■■□□ 2.07
FMR1-202ENST00000334557 SPG7Q9UQ90 795 aa27.96■■■□□ 2.07
FMR1-202ENST00000334557 GNPATO15228 680 aa27.94■■■□□ 2.06
FMR1-202ENST00000334557 NSD3Q9BZ95 1437 aa27.93■■■□□ 2.06
FMR1-202ENST00000334557 TMOD3Q9NYL9 352 aa27.93■■■□□ 2.06
FMR1-202ENST00000334557 KIF3CO14782 793 aa27.92■■■□□ 2.06
FMR1-202ENST00000334557 ATP6V1AP38606 617 aa27.92■■■□□ 2.06
FMR1-202ENST00000334557 WASHC2AQ641Q2 1341 aa27.92■■■□□ 2.06
FMR1-202ENST00000334557 ATG3Q9NT62 314 aa27.91■■■□□ 2.06
FMR1-202ENST00000334557 MMP10P09238 476 aa27.9■■■□□ 2.06
FMR1-202ENST00000334557 PHKG2P15735 406 aa27.9■■■□□ 2.06
FMR1-202ENST00000334557 CDCA8Q53HL2 280 aa27.89■■■□□ 2.06
FMR1-202ENST00000334557 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.89■■■□□ 2.062e-7■■■□□ 15.8
FMR1-202ENST00000334557 SLC4A9Q96Q91 983 aa27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms