RNA–Protein interactions for RNA: ENST00000334352.8

USP16-201, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP16, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-201ENST00000334352 SLC15A2Q16348 729 aa8.95□□□□□ -0.98
USP16-201ENST00000334352 SCN11AQ9UI33 1791 aa8.95□□□□□ -0.98
USP16-201ENST00000334352 CHD4Q14839 1912 aa8.94□□□□□ -0.98
USP16-201ENST00000334352 PTGER2P43116 358 aa8.94□□□□□ -0.98
USP16-201ENST00000334352 TXNRD1Q16881 649 aa8.94□□□□□ -0.98
USP16-201ENST00000334352 MTFR1LQ9H019 292 aa8.94□□□□□ -0.98
USP16-201ENST00000334352 STK32BQ9NY57 414 aa8.94□□□□□ -0.98
USP16-201ENST00000334352 UBR2Q8IWV8 1755 aa8.93□□□□□ -0.98
USP16-201ENST00000334352 PCDH11XQ9BZA7 1347 aa8.93□□□□□ -0.98
USP16-201ENST00000334352 PCDH11YQ9BZA8 1340 aa8.93□□□□□ -0.98
USP16-201ENST00000334352 SIPA1L3O60292 1781 aaPredicted RBP8.93□□□□□ -0.98
USP16-201ENST00000334352 R3HDM1Q15032 1099 aaKnown RBP8.92□□□□□ -0.98
USP16-201ENST00000334352 FLAD1Q8NFF5 587 aa8.92□□□□□ -0.98
USP16-201ENST00000334352 KDRP35968 1356 aa8.92□□□□□ -0.98
USP16-201ENST00000334352 VIRMAQ69YN4 1812 aaKnown RBP8.92□□□□□ -0.98
USP16-201ENST00000334352 ZCRB1Q8TBF4 217 aaKnown RBP8.91□□□□□ -0.98
USP16-201ENST00000334352 CARD14Q9BXL6 1004 aa8.91□□□□□ -0.98
USP16-201ENST00000334352 TJP1Q07157 1748 aa8.91□□□□□ -0.98
USP16-201ENST00000334352 NRXN2Q9P2S2 1712 aa8.91□□□□□ -0.98
USP16-201ENST00000334352 SMARCC1Q92922 1105 aaPredicted RBP8.91□□□□□ -0.98
USP16-201ENST00000334352 IGSF1Q8N6C5 1336 aa8.9□□□□□ -0.98
USP16-201ENST00000334352 A0A0G2JS52 829 aa8.9□□□□□ -0.99
USP16-201ENST00000334352 CSB-PGBD3P0DP91 1061 aa8.9□□□□□ -0.99
USP16-201ENST00000334352 MYT1Q01538 1121 aa8.9□□□□□ -0.99
USP16-201ENST00000334352 ANO8Q9HCE9 1232 aaPredicted RBP8.89□□□□□ -0.99
USP16-201ENST00000334352 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.89□□□□□ -0.99
USP16-201ENST00000334352 DLEC1Q9Y238 1755 aa8.88□□□□□ -0.99
USP16-201ENST00000334352 COL3A1P02461 1466 aaPredicted RBP8.88□□□□□ -0.99
USP16-201ENST00000334352 TATP17735 454 aaPredicted RBP8.88□□□□□ -0.99
USP16-201ENST00000334352 TMC1Q8TDI8 760 aa8.88□□□□□ -0.99
USP16-201ENST00000334352 NLRP2Q9NX02 1062 aa8.88□□□□□ -0.99
USP16-201ENST00000334352 BRCA1P38398 1863 aaKnown RBP8.88□□□□□ -0.99
USP16-201ENST00000334352 C4AP0C0L4 1744 aa8.87□□□□□ -0.99
USP16-201ENST00000334352 AMPHP49418 695 aa8.87□□□□□ -0.99
USP16-201ENST00000334352 NBPF6Q5VWK0 638 aa8.87□□□□□ -0.99
USP16-201ENST00000334352 NBPF4Q96M43 638 aa8.87□□□□□ -0.99
USP16-201ENST00000334352 ERVV-2B6SEH9 535 aa8.87□□□□□ -0.99
USP16-201ENST00000334352 FAM182BQ5T319 152 aa8.87□□□□□ -0.99
USP16-201ENST00000334352 RC3H1Q5TC82 1133 aaKnown RBP8.87□□□□□ -0.99
USP16-201ENST00000334352 SPG7Q9UQ90 795 aa8.87□□□□□ -0.99
USP16-201ENST00000334352 ARFGEF1Q9Y6D6 1849 aa8.87□□□□□ -0.99
USP16-201ENST00000334352 PNPLA7Q6ZV29 1317 aa8.87□□□□□ -0.99
USP16-201ENST00000334352 PSDA5PKW4 1024 aaPredicted RBP8.86□□□□□ -0.99
USP16-201ENST00000334352 HSP90AB1P08238 724 aaKnown RBP8.86□□□□□ -0.99
USP16-201ENST00000334352 EIF4G2P78344 907 aaKnown RBP eCLIP8.86□□□□□ -0.992e-6■■■□□ 15.2
USP16-201ENST00000334352 RGL2O15211 777 aa8.85□□□□□ -0.99
USP16-201ENST00000334352 AMOTQ4VCS5 1084 aa8.85□□□□□ -0.99
USP16-201ENST00000334352 LRRC4BQ9NT99 713 aa8.85□□□□□ -0.99
USP16-201ENST00000334352 USP35Q9P2H5 1018 aa8.85□□□□□ -0.99
USP16-201ENST00000334352 POLKQ9UBT6 870 aa8.85□□□□□ -0.99
USP16-201ENST00000334352 ARFGEF2Q9Y6D5 1785 aa8.85□□□□□ -0.99
USP16-201ENST00000334352 ADRA2BP18089 450 aa8.84□□□□□ -0.99
USP16-201ENST00000334352 PTF1AQ7RTS3 328 aa8.84□□□□□ -0.99
USP16-201ENST00000334352 RAPGEF4Q8WZA2 1011 aa8.84□□□□□ -0.99
USP16-201ENST00000334352 CD2APQ9Y5K6 639 aa8.84□□□□□ -0.99
USP16-201ENST00000334352 SSFA2P28290 1259 aa8.84□□□□□ -0.99
USP16-201ENST00000334352 ZNF827Q17R98 1081 aa8.84□□□□□ -0.99
USP16-201ENST00000334352 CNTNAP4Q9C0A0 1308 aa8.84□□□□□ -0.99
USP16-201ENST00000334352 C10orf71Q711Q0 1435 aa8.83□□□□□ -1
USP16-201ENST00000334352 ADCY9O60503 1353 aa8.83□□□□□ -1
USP16-201ENST00000334352 DCAF8L1A6NGE4 600 aa8.83□□□□□ -1
USP16-201ENST00000334352 PALLDQ8WX93 1383 aa8.83□□□□□ -1
USP16-201ENST00000334352 SCN7AQ01118 1682 aa8.82□□□□□ -1
USP16-201ENST00000334352 BCORQ6W2J9 1755 aa8.82□□□□□ -1
USP16-201ENST00000334352 CYP27B1O15528 508 aa8.82□□□□□ -1
USP16-201ENST00000334352 PHKG2P15735 406 aa8.82□□□□□ -1
USP16-201ENST00000334352 KCPQ6ZWJ8 1503 aa8.82□□□□□ -1
USP16-201ENST00000334352 IFNL2Q8IZJ0 200 aa8.82□□□□□ -1
USP16-201ENST00000334352 EP400Q96L91 3159 aa8.82□□□□□ -1
USP16-201ENST00000334352 KDM6AO15550 1401 aaPredicted RBP8.81□□□□□ -1
USP16-201ENST00000334352 AMER1Q5JTC6 1135 aaPredicted RBP8.81□□□□□ -1
USP16-201ENST00000334352 ARXQ96QS3 562 aa8.81□□□□□ -1
USP16-201ENST00000334352 GGNBP2Q9H3C7 697 aa8.81□□□□□ -1
USP16-201ENST00000334352 PER1O15534 1290 aaPredicted RBP8.81□□□□□ -1
USP16-201ENST00000334352 HSP90AB2PQ58FF8 381 aa8.81□□□□□ -1
USP16-201ENST00000334352 DCAF5Q96JK2 942 aa8.81□□□□□ -1
USP16-201ENST00000334352 EYA1Q99502 592 aa8.81□□□□□ -1
USP16-201ENST00000334352 HSPA5P11021 654 aaKnown RBP8.8□□□□□ -1
USP16-201ENST00000334352 PRIM1P49642 420 aaKnown RBP8.8□□□□□ -1
USP16-201ENST00000334352 EIF4A2Q14240 407 aaKnown RBP8.8□□□□□ -1
USP16-201ENST00000334352 LAMB4A4D0S4 1761 aa8.8□□□□□ -1
USP16-201ENST00000334352 POLD1P28340 1107 aa8.8□□□□□ -1
USP16-201ENST00000334352 IL13P35225 146 aa8.8□□□□□ -1
USP16-201ENST00000334352 SYT17Q9BSW7 474 aa8.8□□□□□ -1
USP16-201ENST00000334352 RRS1Q15050 365 aaKnown RBP8.79□□□□□ -1
USP16-201ENST00000334352 PLEKHO1Q53GL0 409 aaPredicted RBP8.79□□□□□ -1
USP16-201ENST00000334352 CCNL1Q9UK58 526 aaPredicted RBP8.79□□□□□ -1
USP16-201ENST00000334352 VSIG10Q8N0Z9 540 aa8.78□□□□□ -1
USP16-201ENST00000334352 GRIN3BO60391 1043 aa8.78□□□□□ -1
USP16-201ENST00000334352 EMILIN1Q9Y6C2 1016 aa8.78□□□□□ -1
USP16-201ENST00000334352 ZBTB7CA1YPR0 619 aa8.77□□□□□ -1.01
USP16-201ENST00000334352 PLEKHG5O94827 1062 aa8.77□□□□□ -1.01
USP16-201ENST00000334352 PIGBQ92521 554 aa8.77□□□□□ -1.01
USP16-201ENST00000334352 PPP1R1BQ9UD71 204 aaPredicted RBP8.77□□□□□ -1.01
USP16-201ENST00000334352 COL23A1Q86Y22 540 aaPredicted RBP8.77□□□□□ -1.01
USP16-201ENST00000334352 ACSBG1Q96GR2 724 aa8.77□□□□□ -1.01
USP16-201ENST00000334352 PANK3Q9H999 370 aa8.77□□□□□ -1.01
USP16-201ENST00000334352 FHDC1Q9C0D6 1143 aaPredicted RBP8.76□□□□□ -1.01
USP16-201ENST00000334352 TNRC6CQ9HCJ0 1690 aaKnown RBP8.76□□□□□ -1.01
USP16-201ENST00000334352 KDM3BQ7LBC6 1761 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms