RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 C16orf71Q8IYS4 520 aaPredicted RBP23.71■■□□□ 1.39
RFTN1-201ENST00000334133 ZBTB7CA1YPR0 619 aa23.71■■□□□ 1.39
RFTN1-201ENST00000334133 F6X3S4 739 aa23.71■■□□□ 1.39
RFTN1-201ENST00000334133 G2E3Q7L622 706 aa23.7■■□□□ 1.39
RFTN1-201ENST00000334133 USHBP1Q8N6Y0 703 aa23.7■■□□□ 1.38
RFTN1-201ENST00000334133 ABTB2Q8N961 1025 aa23.7■■□□□ 1.38
RFTN1-201ENST00000334133 ANTXR1Q9H6X2 564 aa23.7■■□□□ 1.38
RFTN1-201ENST00000334133 MEIS3Q99687 375 aa23.69■■□□□ 1.38
RFTN1-201ENST00000334133 CHMP4BQ9H444 224 aaKnown RBP23.69■■□□□ 1.38
RFTN1-201ENST00000334133 TTC21AQ8NDW8 1320 aa23.68■■□□□ 1.38
RFTN1-201ENST00000334133 DIP2AQ14689 1571 aa23.68■■□□□ 1.38
RFTN1-201ENST00000334133 FLT4P35916 1363 aa23.68■■□□□ 1.38
RFTN1-201ENST00000334133 SMARCA5O60264 1052 aaPredicted RBP23.67■■□□□ 1.38
RFTN1-201ENST00000334133 IL27Q8NEV9 243 aa23.67■■□□□ 1.38
RFTN1-201ENST00000334133 OTUD7AQ8TE49 926 aaPredicted RBP23.67■■□□□ 1.38
RFTN1-201ENST00000334133 BMP2KLQ5H9B9 411 aa23.66■■□□□ 1.38
RFTN1-201ENST00000334133 SBNO1A3KN83 1393 aa23.66■■□□□ 1.38
RFTN1-201ENST00000334133 MSH6P52701 1360 aa23.66■■□□□ 1.38
RFTN1-201ENST00000334133 CEP170BQ9Y4F5 1589 aaPredicted RBP23.66■■□□□ 1.38
RFTN1-201ENST00000334133 CRB1P82279 1406 aa23.66■■□□□ 1.38
RFTN1-201ENST00000334133 ARHGAP23Q9P227 1491 aa23.65■■□□□ 1.38
RFTN1-201ENST00000334133 SLIT1O75093 1534 aa23.65■■□□□ 1.38
RFTN1-201ENST00000334133 INTS3Q68E01 1043 aaKnown RBP23.65■■□□□ 1.38
RFTN1-201ENST00000334133 TBC1D9Q6ZT07 1266 aa23.64■■□□□ 1.38
RFTN1-201ENST00000334133 RGS12O14924 1447 aa23.64■■□□□ 1.37
RFTN1-201ENST00000334133 FER1L4A9Z1Z3 1794 aa23.64■■□□□ 1.37
RFTN1-201ENST00000334133 NALCNQ8IZF0 1738 aa23.63■■□□□ 1.37
RFTN1-201ENST00000334133 HOXC9P31274 260 aa23.63■■□□□ 1.37
RFTN1-201ENST00000334133 RTN4Q9NQC3 1192 aaKnown RBP23.63■■□□□ 1.37
RFTN1-201ENST00000334133 ARHGEF10O15013 1369 aa23.63■■□□□ 1.37
RFTN1-201ENST00000334133 GSPT1P15170 499 aaKnown RBP23.61■■□□□ 1.37
RFTN1-201ENST00000334133 IGSF1Q8N6C5 1336 aa23.61■■□□□ 1.37
RFTN1-201ENST00000334133 CEP85Q6P2H3 762 aa23.61■■□□□ 1.37
RFTN1-201ENST00000334133 RBM42Q9BTD8 480 aaKnown RBP23.61■■□□□ 1.37
RFTN1-201ENST00000334133 DCTPP1Q9H773 170 aa23.61■■□□□ 1.37
RFTN1-201ENST00000334133 FOXD4L1Q9NU39 408 aa23.61■■□□□ 1.37
RFTN1-201ENST00000334133 SETD1BQ9UPS6 1966 aaKnown RBP23.6■■□□□ 1.37
RFTN1-201ENST00000334133 RGPD1P0DJD0 1748 aa23.6■■□□□ 1.37
RFTN1-201ENST00000334133 BRPF3Q9ULD4 1205 aa23.6■■□□□ 1.37
RFTN1-201ENST00000334133 PIK3C2AO00443 1686 aa23.6■■□□□ 1.37
RFTN1-201ENST00000334133 PLEKHM2Q8IWE5 1019 aa23.6■■□□□ 1.37
RFTN1-201ENST00000334133 HSCBQ8IWL3 235 aa23.6■■□□□ 1.37
RFTN1-201ENST00000334133 KIAA0232Q92628 1395 aa23.59■■□□□ 1.37
RFTN1-201ENST00000334133 XPCQ01831 940 aaPredicted RBP23.59■■□□□ 1.37
RFTN1-201ENST00000334133 ANKRD44Q8N8A2 993 aa23.59■■□□□ 1.37
RFTN1-201ENST00000334133 ARXQ96QS3 562 aa23.58■■□□□ 1.37
RFTN1-201ENST00000334133 GAS2L2Q8NHY3 880 aa23.58■■□□□ 1.37
RFTN1-201ENST00000334133 HAP1P54257 671 aaPredicted RBP23.58■■□□□ 1.36
RFTN1-201ENST00000334133 ATP10DQ9P241 1426 aa23.57■■□□□ 1.36
RFTN1-201ENST00000334133 RTL1A6NKG5 1358 aa23.57■■□□□ 1.36
RFTN1-201ENST00000334133 CD2BP2O95400 341 aaKnown RBP23.56■■□□□ 1.36
RFTN1-201ENST00000334133 IL17REQ8NFR9 667 aa23.56■■□□□ 1.36
RFTN1-201ENST00000334133 KDRP35968 1356 aa23.56■■□□□ 1.36
RFTN1-201ENST00000334133 GNAT3A8MTJ3 354 aa23.56■■□□□ 1.36
RFTN1-201ENST00000334133 RBM25P49756 843 aaKnown RBP23.56■■□□□ 1.36
RFTN1-201ENST00000334133 PHF8Q9UPP1 1060 aa23.56■■□□□ 1.36
RFTN1-201ENST00000334133 FMN2Q9NZ56 1722 aa23.56■■□□□ 1.36
RFTN1-201ENST00000334133 PTPRCP08575 1304 aa23.56■■□□□ 1.36
RFTN1-201ENST00000334133 ESCO1Q5FWF5 840 aa23.55■■□□□ 1.36
RFTN1-201ENST00000334133 FKBP5Q13451 457 aaPredicted RBP23.55■■□□□ 1.36
RFTN1-201ENST00000334133 KIF2CQ99661 725 aa23.55■■□□□ 1.36
RFTN1-201ENST00000334133 STK31Q9BXU1 1019 aa23.54■■□□□ 1.36
RFTN1-201ENST00000334133 LMOD2Q6P5Q4 547 aa23.53■■□□□ 1.36
RFTN1-201ENST00000334133 RPAP2Q8IXW5 612 aaPredicted RBP23.52■■□□□ 1.36
RFTN1-201ENST00000334133 TSHZ3Q63HK5 1081 aa23.52■■□□□ 1.36
RFTN1-201ENST00000334133 CDC45O75419 566 aa23.52■■□□□ 1.36
RFTN1-201ENST00000334133 GZF1Q9H116 711 aaPredicted RBP23.52■■□□□ 1.36
RFTN1-201ENST00000334133 EXOC6BQ9Y2D4 811 aa23.51■■□□□ 1.35
RFTN1-201ENST00000334133 HSP90AB1P08238 724 aaKnown RBP23.51■■□□□ 1.35
RFTN1-201ENST00000334133 PSME1Q06323 249 aa23.51■■□□□ 1.35
RFTN1-201ENST00000334133 TTC22Q5TAA0 569 aa23.51■■□□□ 1.35
RFTN1-201ENST00000334133 FLIIQ13045 1269 aa23.5■■□□□ 1.35
RFTN1-201ENST00000334133 ANKLE2Q86XL3 938 aa23.5■■□□□ 1.35
RFTN1-201ENST00000334133 KIF24Q5T7B8 1368 aa23.5■■□□□ 1.35
RFTN1-201ENST00000334133 XRN1Q8IZH2 1706 aaKnown RBP23.49■■□□□ 1.35
RFTN1-201ENST00000334133 LRRC59Q96AG4 307 aaKnown RBP23.49■■□□□ 1.35
RFTN1-201ENST00000334133 CHMP5Q9NZZ3 219 aa23.49■■□□□ 1.35
RFTN1-201ENST00000334133 NBPF6Q5VWK0 638 aa23.49■■□□□ 1.35
RFTN1-201ENST00000334133 NBPF4Q96M43 638 aa23.49■■□□□ 1.35
RFTN1-201ENST00000334133 EIF2S2P20042 333 aaKnown RBP23.48■■□□□ 1.35
RFTN1-201ENST00000334133 HSP90AA1P07900 732 aaKnown RBP23.47■■□□□ 1.35
RFTN1-201ENST00000334133 SDSP20132 328 aa23.47■■□□□ 1.35
RFTN1-201ENST00000334133 LGR6Q9HBX8 967 aa23.47■■□□□ 1.35
RFTN1-201ENST00000334133 ORAI2Q96SN7 254 aa23.46■■□□□ 1.35
RFTN1-201ENST00000334133 MCM4P33991 863 aa23.46■■□□□ 1.35
RFTN1-201ENST00000334133 ANKARQ7Z5J8 1434 aa23.46■■□□□ 1.35
RFTN1-201ENST00000334133 PHAXQ9H814 394 aaKnown RBP23.46■■□□□ 1.35
RFTN1-201ENST00000334133 MAP3K5Q99683 1374 aa23.46■■□□□ 1.35
RFTN1-201ENST00000334133 TAF7Q15545 349 aaPredicted RBP23.46■■□□□ 1.35
RFTN1-201ENST00000334133 CCDC30Q5VVM6 783 aa23.46■■□□□ 1.35
RFTN1-201ENST00000334133 CCT4P50991 539 aaKnown RBP23.45■■□□□ 1.34
RFTN1-201ENST00000334133 PNMA6EA0A0J9YXQ4 647 aa23.44■■□□□ 1.34
RFTN1-201ENST00000334133 KCNQ3O43525 872 aa23.43■■□□□ 1.34
RFTN1-201ENST00000334133 ANXA1P04083 346 aa23.43■■□□□ 1.34
RFTN1-201ENST00000334133 NWD1Q149M9 1564 aa23.43■■□□□ 1.34
RFTN1-201ENST00000334133 GNAI2P04899 355 aa23.43■■□□□ 1.34
RFTN1-201ENST00000334133 HDGFL1Q5TGJ6 251 aa23.43■■□□□ 1.34
RFTN1-201ENST00000334133 MARF1Q9Y4F3 1742 aaKnown RBP23.42■■□□□ 1.34
RFTN1-201ENST00000334133 HMMRO75330 724 aa23.42■■□□□ 1.34
RFTN1-201ENST00000334133 SNX21Q969T3 373 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms