RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 SAMD1Q6SPF0 538 aaPredicted RBP15.59■□□□□ 0.09
VSTM4-202ENST00000332853 CCDC73Q6ZRK6 1079 aa15.59■□□□□ 0.09
VSTM4-202ENST00000332853 LRRFIP2Q9Y608 721 aaKnown RBP15.59■□□□□ 0.09
VSTM4-202ENST00000332853 MYD88Q99836 296 aa15.59■□□□□ 0.09
VSTM4-202ENST00000332853 ABCC2Q92887 1545 aa15.59■□□□□ 0.09
VSTM4-202ENST00000332853 MCM2P49736 904 aa15.59■□□□□ 0.09
VSTM4-202ENST00000332853 NCBP3Q53F19 620 aaKnown RBP15.59■□□□□ 0.09
VSTM4-202ENST00000332853 PPP6R1Q9UPN7 881 aa15.58■□□□□ 0.09
VSTM4-202ENST00000332853 AEBP2Q6ZN18 517 aaPredicted RBP15.58■□□□□ 0.08
VSTM4-202ENST00000332853 TNNQ9UQP3 1299 aa15.58■□□□□ 0.08
VSTM4-202ENST00000332853 RIMS2Q9UQ26 1411 aa15.58■□□□□ 0.08
VSTM4-202ENST00000332853 SAFBQ15424 915 aaKnown RBP eCLIP15.58■□□□□ 0.08
VSTM4-202ENST00000332853 BCL11BQ9C0K0 894 aaPredicted RBP15.58■□□□□ 0.08
VSTM4-202ENST00000332853 NCKAP5LQ9HCH0 1330 aa15.58■□□□□ 0.08
VSTM4-202ENST00000332853 MX1P20591 662 aa15.57■□□□□ 0.08
VSTM4-202ENST00000332853 ATP2B1P20020 1258 aa15.57■□□□□ 0.08
VSTM4-202ENST00000332853 JAKMIP1Q96N16 626 aaKnown RBP15.57■□□□□ 0.08
VSTM4-202ENST00000332853 MRE11P49959 708 aa15.57■□□□□ 0.08
VSTM4-202ENST00000332853 AEBP1Q8IUX7 1158 aa15.57■□□□□ 0.08
VSTM4-202ENST00000332853 KRT28Q7Z3Y7 464 aa15.57■□□□□ 0.08
VSTM4-202ENST00000332853 ANO8Q9HCE9 1232 aaPredicted RBP15.57■□□□□ 0.08
VSTM4-202ENST00000332853 CCAR2Q8N163 923 aaKnown RBP15.56■□□□□ 0.08
VSTM4-202ENST00000332853 KLHL34Q8N239 644 aa15.56■□□□□ 0.08
VSTM4-202ENST00000332853 ABCC10Q5T3U5 1492 aa15.55■□□□□ 0.08
VSTM4-202ENST00000332853 TPM3P06753 285 aa15.55■□□□□ 0.08
VSTM4-202ENST00000332853 TSHZ3Q63HK5 1081 aa15.55■□□□□ 0.08
VSTM4-202ENST00000332853 ANXA1P04083 346 aa15.55■□□□□ 0.08
VSTM4-202ENST00000332853 FLIIQ13045 1269 aa15.55■□□□□ 0.08
VSTM4-202ENST00000332853 BICDL1Q6ZP65 573 aa15.55■□□□□ 0.08
VSTM4-202ENST00000332853 CFAP65Q6ZU64 1925 aaKnown RBP15.55■□□□□ 0.08
VSTM4-202ENST00000332853 MAST1Q9Y2H9 1570 aa15.55■□□□□ 0.08
VSTM4-202ENST00000332853 UHRF1BP1LA0JNW5 1464 aa15.55■□□□□ 0.08
VSTM4-202ENST00000332853 TTC21BQ7Z4L5 1316 aa15.55■□□□□ 0.08
VSTM4-202ENST00000332853 PDRG1Q9NUG6 133 aa15.54■□□□□ 0.08
VSTM4-202ENST00000332853 AMOTQ4VCS5 1084 aa15.54■□□□□ 0.08
VSTM4-202ENST00000332853 KIF1BPQ96EK5 621 aa15.54■□□□□ 0.08
VSTM4-202ENST00000332853 PLEKHH1Q9ULM0 1364 aa15.54■□□□□ 0.08
VSTM4-202ENST00000332853 NOC3LQ8WTT2 800 aaKnown RBP15.54■□□□□ 0.08
VSTM4-202ENST00000332853 MPHOSPH8Q99549 860 aa15.54■□□□□ 0.08
VSTM4-202ENST00000332853 BOLA2Q9H3K6 86 aa15.54■□□□□ 0.08
VSTM4-202ENST00000332853 PCMTD1Q96MG8 357 aaPredicted RBP15.54■□□□□ 0.08
VSTM4-202ENST00000332853 CWC22Q9HCG8 908 aaKnown RBP15.54■□□□□ 0.08
VSTM4-202ENST00000332853 ARHGEF12Q9NZN5 1544 aa15.54■□□□□ 0.08
VSTM4-202ENST00000332853 SDF4Q9BRK5 362 aa15.54■□□□□ 0.08
VSTM4-202ENST00000332853 DNAAF4Q8WXU2 420 aa15.53■□□□□ 0.08
VSTM4-202ENST00000332853 CCDC8Q9H0W5 538 aaPredicted RBP15.53■□□□□ 0.08
VSTM4-202ENST00000332853 CHRNA2Q15822 529 aa15.53■□□□□ 0.08
VSTM4-202ENST00000332853 PCDHB15Q9Y5E8 787 aa15.53■□□□□ 0.08
VSTM4-202ENST00000332853 CASTP20810 708 aaKnown RBP15.53■□□□□ 0.08
VSTM4-202ENST00000332853 TARBP1Q13395 1621 aaKnown RBP15.53■□□□□ 0.08
VSTM4-202ENST00000332853 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.53■□□□□ 0.08
VSTM4-202ENST00000332853 POLKQ9UBT6 870 aa15.53■□□□□ 0.08
VSTM4-202ENST00000332853 TEX14Q8IWB6 1497 aa15.53■□□□□ 0.08
VSTM4-202ENST00000332853 PER1O15534 1290 aaPredicted RBP15.53■□□□□ 0.08
VSTM4-202ENST00000332853 UPF3BQ9BZI7 483 aaKnown RBP15.53■□□□□ 0.08
VSTM4-202ENST00000332853 TSR1Q2NL82 804 aaKnown RBP15.52■□□□□ 0.08
VSTM4-202ENST00000332853 HOOK1Q9UJC3 728 aaKnown RBP15.52■□□□□ 0.08
VSTM4-202ENST00000332853 JARID2Q92833 1246 aaPredicted RBP15.52■□□□□ 0.08
VSTM4-202ENST00000332853 CEP126Q9P2H0 1117 aa15.52■□□□□ 0.08
VSTM4-202ENST00000332853 C8orf58Q8NAV2 365 aa15.52■□□□□ 0.07
VSTM4-202ENST00000332853 TSPY26PQ9H489 355 aa15.52■□□□□ 0.07
VSTM4-202ENST00000332853 TMOD3Q9NYL9 352 aa15.52■□□□□ 0.07
VSTM4-202ENST00000332853 MAP3K2Q9Y2U5 619 aa15.52■□□□□ 0.07
VSTM4-202ENST00000332853 ADGRL2O95490 1459 aa15.52■□□□□ 0.07
VSTM4-202ENST00000332853 A0A1W2PP64 1363 aa15.52■□□□□ 0.07
VSTM4-202ENST00000332853 BLOC1S2Q6QNY1 142 aa15.52■□□□□ 0.07
VSTM4-202ENST00000332853 SART3Q15020 963 aaKnown RBP15.51■□□□□ 0.07
VSTM4-202ENST00000332853 ANKRD24Q8TF21 1146 aa15.51■□□□□ 0.07
VSTM4-202ENST00000332853 PTPRCP08575 1304 aa15.51■□□□□ 0.07
VSTM4-202ENST00000332853 LARP1Q6PKG0 1096 aaKnown RBP15.51■□□□□ 0.07
VSTM4-202ENST00000332853 MPNDQ8N594 471 aa15.51■□□□□ 0.07
VSTM4-202ENST00000332853 ABCC1P33527 1531 aa15.51■□□□□ 0.07
VSTM4-202ENST00000332853 EIF4A2Q14240 407 aaKnown RBP15.51■□□□□ 0.07
VSTM4-202ENST00000332853 RSPH6AQ9H0K4 717 aa15.51■□□□□ 0.07
VSTM4-202ENST00000332853 LARP1BQ659C4 914 aaKnown RBP15.51■□□□□ 0.07
VSTM4-202ENST00000332853 ADAMTS2O95450 1211 aa15.51■□□□□ 0.07
VSTM4-202ENST00000332853 MCM4P33991 863 aa15.51■□□□□ 0.07
VSTM4-202ENST00000332853 LARP6Q9BRS8 491 aaKnown RBP15.51■□□□□ 0.07
VSTM4-202ENST00000332853 KDM6BO15054 1643 aa15.5■□□□□ 0.07
VSTM4-202ENST00000332853 MBD3O95983 291 aa15.5■□□□□ 0.07
VSTM4-202ENST00000332853 TPM1P09493 284 aa15.5■□□□□ 0.07
VSTM4-202ENST00000332853 GCC2Q8IWJ2 1684 aa15.5■□□□□ 0.07
VSTM4-202ENST00000332853 COL17A1Q9UMD9 1497 aaPredicted RBP15.5■□□□□ 0.07
VSTM4-202ENST00000332853 TPM2P07951 284 aa15.5■□□□□ 0.07
VSTM4-202ENST00000332853 RAB11FIP3O75154 756 aa15.5■□□□□ 0.07
VSTM4-202ENST00000332853 PDCP20941 246 aa15.5■□□□□ 0.07
VSTM4-202ENST00000332853 PRPF40BQ6NWY9 871 aaKnown RBP15.5■□□□□ 0.07
VSTM4-202ENST00000332853 IL27Q8NEV9 243 aa15.5■□□□□ 0.07
VSTM4-202ENST00000332853 ADGBQ8N7X0 1667 aa15.5■□□□□ 0.07
VSTM4-202ENST00000332853 ATP7AQ04656 1500 aa15.5■□□□□ 0.07
VSTM4-202ENST00000332853 IL16Q14005 1332 aa15.5■□□□□ 0.07
VSTM4-202ENST00000332853 FAM43AQ8N2R8 423 aa15.5■□□□□ 0.07
VSTM4-202ENST00000332853 TBC1D2Q9BYX2 928 aa15.49■□□□□ 0.07
VSTM4-202ENST00000332853 WDR33Q9C0J8 1336 aaKnown RBP15.49■□□□□ 0.07
VSTM4-202ENST00000332853 TBC1D9Q6ZT07 1266 aa15.49■□□□□ 0.07
VSTM4-202ENST00000332853 POLR3AO14802 1390 aaPredicted RBP15.49■□□□□ 0.07
VSTM4-202ENST00000332853 STARD3NLO95772 234 aa15.49■□□□□ 0.07
VSTM4-202ENST00000332853 FMNL2Q96PY5 1086 aa15.49■□□□□ 0.07
VSTM4-202ENST00000332853 DBF4Q9UBU7 674 aaPredicted RBP15.49■□□□□ 0.07
VSTM4-202ENST00000332853 ANKRD1Q15327 319 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms