RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 LMAN1P49257 510 aa19.17■□□□□ 0.66
PTCH1-201ENST00000331920 MYL6BP14649 208 aa19.17■□□□□ 0.66
PTCH1-201ENST00000331920 DAAM2Q86T65 1068 aa19.17■□□□□ 0.66
PTCH1-201ENST00000331920 GNAI1P63096 354 aa19.17■□□□□ 0.66
PTCH1-201ENST00000331920 RUNDC1Q96C34 613 aa19.17■□□□□ 0.66
PTCH1-201ENST00000331920 TNIKQ9UKE5 1360 aa19.16■□□□□ 0.66
PTCH1-201ENST00000331920 GIGYF2Q6Y7W6 1299 aaKnown RBP19.16■□□□□ 0.66
PTCH1-201ENST00000331920 ZNF354CQ86Y25 554 aa19.16■□□□□ 0.66
PTCH1-201ENST00000331920 PDCL2Q8N4E4 241 aa19.16■□□□□ 0.66
PTCH1-201ENST00000331920 CCDC96Q2M329 555 aa19.16■□□□□ 0.66
PTCH1-201ENST00000331920 KRT85P78386 507 aa19.16■□□□□ 0.66
PTCH1-201ENST00000331920 MPHOSPH8Q99549 860 aa19.16■□□□□ 0.66
PTCH1-201ENST00000331920 PRPF4BQ13523 1007 aaKnown RBP19.15■□□□□ 0.66
PTCH1-201ENST00000331920 MAP9Q49MG5 647 aa19.15■□□□□ 0.66
PTCH1-201ENST00000331920 PPP1R14CQ8TAE6 165 aa19.15■□□□□ 0.66
PTCH1-201ENST00000331920 UBAC1Q9BSL1 405 aa19.15■□□□□ 0.66
PTCH1-201ENST00000331920 FANCIQ9NVI1 1328 aa19.15■□□□□ 0.66
PTCH1-201ENST00000331920 RAB3IL1Q8TBN0 382 aa19.15■□□□□ 0.66
PTCH1-201ENST00000331920 IMMTQ16891 758 aaKnown RBP19.15■□□□□ 0.66
PTCH1-201ENST00000331920 HLTFQ14527 1009 aaKnown RBP eCLIP19.15■□□□□ 0.66
PTCH1-201ENST00000331920 ATP2C2O75185 946 aa19.14■□□□□ 0.65
PTCH1-201ENST00000331920 CCDC30Q5VVM6 783 aa19.14■□□□□ 0.65
PTCH1-201ENST00000331920 TNIP1Q15025 636 aa19.14■□□□□ 0.65
PTCH1-201ENST00000331920 TSNARE1Q96NA8 513 aa19.14■□□□□ 0.65
PTCH1-201ENST00000331920 PAIP2Q9BPZ3 127 aaKnown RBP19.14■□□□□ 0.65
PTCH1-201ENST00000331920 PSMC4P43686 418 aa19.14■□□□□ 0.65
PTCH1-201ENST00000331920 FAM107BQ9H098 131 aa19.14■□□□□ 0.65
PTCH1-201ENST00000331920 ANKRD1Q15327 319 aa19.14■□□□□ 0.65
PTCH1-201ENST00000331920 CCDC144AA2RUR9 1427 aa19.13■□□□□ 0.65
PTCH1-201ENST00000331920 CFAP58Q5T655 872 aa19.13■□□□□ 0.65
PTCH1-201ENST00000331920 PUF60Q9UHX1 559 aaKnown RBP19.13■□□□□ 0.65
PTCH1-201ENST00000331920 MCM2P49736 904 aa19.12■□□□□ 0.65
PTCH1-201ENST00000331920 TMCO4Q5TGY1 634 aa19.12■□□□□ 0.65
PTCH1-201ENST00000331920 KIF5CO60282 957 aa19.12■□□□□ 0.65
PTCH1-201ENST00000331920 SEC63Q9UGP8 760 aaKnown RBP19.12■□□□□ 0.65
PTCH1-201ENST00000331920 ZBED9Q6R2W3 1325 aa19.12■□□□□ 0.65
PTCH1-201ENST00000331920 SMTNL1A8MU46 457 aa19.12■□□□□ 0.65
PTCH1-201ENST00000331920 MXRA7P84157 204 aa19.12■□□□□ 0.65
PTCH1-201ENST00000331920 SPTY2D1Q68D10 685 aaPredicted RBP19.12■□□□□ 0.65
PTCH1-201ENST00000331920 NAP1L3Q99457 506 aaPredicted RBP19.12■□□□□ 0.65
PTCH1-201ENST00000331920 TTLL12Q14166 644 aaPredicted RBP19.12■□□□□ 0.65
PTCH1-201ENST00000331920 MICALCLQ6ZW33 695 aa19.11■□□□□ 0.65
PTCH1-201ENST00000331920 NUTM2BA6NNL0 878 aaPredicted RBP19.11■□□□□ 0.65
PTCH1-201ENST00000331920 NUTM2EB1AL46 878 aaPredicted RBP19.11■□□□□ 0.65
PTCH1-201ENST00000331920 NUTM2AQ8IVF1 878 aaPredicted RBP19.11■□□□□ 0.65
PTCH1-201ENST00000331920 NUP62CLQ9H1M0 184 aa19.11■□□□□ 0.65
PTCH1-201ENST00000331920 TERF1P54274 439 aa19.11■□□□□ 0.65
PTCH1-201ENST00000331920 FSD2A1L4K1 749 aa19.11■□□□□ 0.65
PTCH1-201ENST00000331920 TSG101Q99816 390 aa19.11■□□□□ 0.65
PTCH1-201ENST00000331920 RGS22Q8NE09 1264 aa19.1■□□□□ 0.65
PTCH1-201ENST00000331920 KIF4BQ2VIQ3 1234 aa19.1■□□□□ 0.65
PTCH1-201ENST00000331920 FKBP15Q5T1M5 1219 aa19.1■□□□□ 0.65
PTCH1-201ENST00000331920 C6orf163Q5TEZ5 329 aa19.1■□□□□ 0.65
PTCH1-201ENST00000331920 BICDL1Q6ZP65 573 aa19.1■□□□□ 0.65
PTCH1-201ENST00000331920 GRPEL1Q9HAV7 217 aa19.1■□□□□ 0.65
PTCH1-201ENST00000331920 NUP88Q99567 741 aaPredicted RBP19.1■□□□□ 0.65
PTCH1-201ENST00000331920 UACAQ9BZF9 1416 aa19.1■□□□□ 0.65
PTCH1-201ENST00000331920 CARMIL2Q6F5E8 1435 aa19.09■□□□□ 0.65
PTCH1-201ENST00000331920 CDKL5O76039 1030 aa19.09■□□□□ 0.65
PTCH1-201ENST00000331920 URI1O94763 535 aaPredicted RBP19.09■□□□□ 0.65
PTCH1-201ENST00000331920 CTR9Q6PD62 1173 aa19.09■□□□□ 0.65
PTCH1-201ENST00000331920 OTUD6BQ8N6M0 293 aa19.09■□□□□ 0.65
PTCH1-201ENST00000331920 LRP2BPQ9P2M1 347 aa19.09■□□□□ 0.65
PTCH1-201ENST00000331920 CLGNO14967 610 aa19.09■□□□□ 0.65
PTCH1-201ENST00000331920 TDRD12Q587J7 1177 aaKnown RBP19.09■□□□□ 0.65
PTCH1-201ENST00000331920 CWC27Q6UX04 472 aaKnown RBP19.09■□□□□ 0.65
PTCH1-201ENST00000331920 DDX54Q8TDD1 881 aaKnown RBP19.09■□□□□ 0.65
PTCH1-201ENST00000331920 A0A1W2PRG0 241 aa19.09■□□□□ 0.65
PTCH1-201ENST00000331920 MAATS1Q7Z4T9 603 aa19.08■□□□□ 0.65
PTCH1-201ENST00000331920 VPS36Q86VN1 386 aa19.08■□□□□ 0.65
PTCH1-201ENST00000331920 WDR33Q9C0J8 1336 aaKnown RBP19.08■□□□□ 0.65
PTCH1-201ENST00000331920 GNAI2P04899 355 aa19.08■□□□□ 0.65
PTCH1-201ENST00000331920 CCDC85AQ96PX6 553 aaPredicted RBP19.08■□□□□ 0.65
PTCH1-201ENST00000331920 DZIP1Q86YF9 867 aaKnown RBP19.08■□□□□ 0.64
PTCH1-201ENST00000331920 GBP3Q9H0R5 595 aa19.08■□□□□ 0.64
PTCH1-201ENST00000331920 CGNQ9P2M7 1197 aaKnown RBP19.08■□□□□ 0.64
PTCH1-201ENST00000331920 VGFO15240 615 aaPredicted RBP19.08■□□□□ 0.64
PTCH1-201ENST00000331920 TAOK3Q9H2K8 898 aa19.08■□□□□ 0.64
PTCH1-201ENST00000331920 PTPN14Q15678 1187 aa19.07■□□□□ 0.64
PTCH1-201ENST00000331920 FBF1Q8TES7 1133 aa19.07■□□□□ 0.64
PTCH1-201ENST00000331920 IKBKGQ9Y6K9 419 aa19.07■□□□□ 0.64
PTCH1-201ENST00000331920 SH3BP5O60239 455 aa19.07■□□□□ 0.64
PTCH1-201ENST00000331920 KANK4Q5T7N3 995 aaPredicted RBP19.07■□□□□ 0.64
PTCH1-201ENST00000331920 CUX2O14529 1486 aa19.07■□□□□ 0.64
PTCH1-201ENST00000331920 TTC36A6NLP5 189 aa19.07■□□□□ 0.64
PTCH1-201ENST00000331920 CPLX3Q8WVH0 158 aa19.07■□□□□ 0.64
PTCH1-201ENST00000331920 FMN1Q68DA7 1419 aa19.06■□□□□ 0.64
PTCH1-201ENST00000331920 MMRN2Q9H8L6 949 aa19.06■□□□□ 0.64
PTCH1-201ENST00000331920 ABTB2Q8N961 1025 aa19.06■□□□□ 0.64
PTCH1-201ENST00000331920 GTF2F1P35269 517 aaKnown RBP eCLIP19.06■□□□□ 0.64
PTCH1-201ENST00000331920 CARMIL1Q5VZK9 1371 aa19.06■□□□□ 0.64
PTCH1-201ENST00000331920 CEP131Q9UPN4 1083 aa19.06■□□□□ 0.64
PTCH1-201ENST00000331920 JAKMIP1Q96N16 626 aaKnown RBP19.05■□□□□ 0.64
PTCH1-201ENST00000331920 CCDC6Q16204 474 aa19.05■□□□□ 0.64
PTCH1-201ENST00000331920 PDRG1Q9NUG6 133 aa19.05■□□□□ 0.64
PTCH1-201ENST00000331920 TRMT1Q9NXH9 659 aaKnown RBP19.05■□□□□ 0.64
PTCH1-201ENST00000331920 TPD52P55327 224 aaPredicted RBP19.05■□□□□ 0.64
PTCH1-201ENST00000331920 GNAI3P08754 354 aa19.05■□□□□ 0.64
PTCH1-201ENST00000331920 MCM3P25205 808 aa19.05■□□□□ 0.64
PTCH1-201ENST00000331920 NOP2P46087 812 aaKnown RBP19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms