RNA–Protein interactions for RNA: ENST00000331728.8

LIMK2-201, Transcript of LIM domain kinase 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIMK2, Length 3,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-201ENST00000331728 MCM10Q7L590 875 aa10.65□□□□□ -0.7
LIMK2-201ENST00000331728 FAM135BQ49AJ0 1406 aa10.64□□□□□ -0.71
LIMK2-201ENST00000331728 WASLO00401 505 aaPredicted RBP10.64□□□□□ -0.71
LIMK2-201ENST00000331728 IL13P35225 146 aa10.64□□□□□ -0.71
LIMK2-201ENST00000331728 ZSCAN23Q3MJ62 389 aa10.64□□□□□ -0.71
LIMK2-201ENST00000331728 SIRT2Q8IXJ6 389 aa10.64□□□□□ -0.71
LIMK2-201ENST00000331728 R3HCC1Q9Y3T6 440 aaKnown RBP10.64□□□□□ -0.71
LIMK2-201ENST00000331728 CCDC61Q9Y6R9 512 aa10.64□□□□□ -0.71
LIMK2-201ENST00000331728 AK9Q5TCS8 1911 aa10.64□□□□□ -0.71
LIMK2-201ENST00000331728 COL3A1P02461 1466 aaPredicted RBP10.64□□□□□ -0.71
LIMK2-201ENST00000331728 PTCH1Q13635 1447 aa10.64□□□□□ -0.71
LIMK2-201ENST00000331728 LRRC7Q96NW7 1537 aa10.63□□□□□ -0.71
LIMK2-201ENST00000331728 KRT24Q2M2I5 525 aa10.63□□□□□ -0.71
LIMK2-201ENST00000331728 OTUD7AQ8TE49 926 aaPredicted RBP10.63□□□□□ -0.71
LIMK2-201ENST00000331728 MAP7D2Q96T17 732 aa10.63□□□□□ -0.71
LIMK2-201ENST00000331728 RIMS2Q9UQ26 1411 aa10.63□□□□□ -0.71
LIMK2-201ENST00000331728 REREQ9P2R6 1566 aa10.63□□□□□ -0.71
LIMK2-201ENST00000331728 RBM10P98175 930 aaKnown RBP10.63□□□□□ -0.71
LIMK2-201ENST00000331728 RNF214Q8ND24 703 aa10.63□□□□□ -0.71
LIMK2-201ENST00000331728 MEIS3Q99687 375 aa10.63□□□□□ -0.71
LIMK2-201ENST00000331728 USP26Q9BXU7 913 aa10.63□□□□□ -0.71
LIMK2-201ENST00000331728 PNPLA6Q8IY17 1366 aa10.63□□□□□ -0.71
LIMK2-201ENST00000331728 MBD3O95983 291 aa10.63□□□□□ -0.71
LIMK2-201ENST00000331728 FKBP5Q13451 457 aaPredicted RBP10.62□□□□□ -0.71
LIMK2-201ENST00000331728 CEP85Q6P2H3 762 aa10.62□□□□□ -0.71
LIMK2-201ENST00000331728 LMBRD1Q9NUN5 540 aa10.62□□□□□ -0.71
LIMK2-201ENST00000331728 NEXMIFQ5QGS0 1516 aa10.62□□□□□ -0.71
LIMK2-201ENST00000331728 AEBP1Q8IUX7 1158 aa10.62□□□□□ -0.71
LIMK2-201ENST00000331728 NECTIN2Q92692 538 aa10.62□□□□□ -0.71
LIMK2-201ENST00000331728 FAM13BQ9NYF5 915 aa10.62□□□□□ -0.71
LIMK2-201ENST00000331728 NOL7Q9UMY1 257 aaKnown RBP10.62□□□□□ -0.71
LIMK2-201ENST00000331728 CAMSAP1Q5T5Y3 1602 aa10.62□□□□□ -0.71
LIMK2-201ENST00000331728 ZBTB7CA1YPR0 619 aa10.62□□□□□ -0.71
LIMK2-201ENST00000331728 GNAI2P04899 355 aa10.62□□□□□ -0.71
LIMK2-201ENST00000331728 MCM2P49736 904 aa10.62□□□□□ -0.71
LIMK2-201ENST00000331728 PLCB2Q00722 1185 aa10.62□□□□□ -0.71
LIMK2-201ENST00000331728 RBSNQ9H1K0 784 aa10.62□□□□□ -0.71
LIMK2-201ENST00000331728 RBM27Q9P2N5 1060 aaKnown RBP10.62□□□□□ -0.71
LIMK2-201ENST00000331728 EXOC6BQ9Y2D4 811 aa10.62□□□□□ -0.71
LIMK2-201ENST00000331728 PTPRCP08575 1304 aa10.61□□□□□ -0.71
LIMK2-201ENST00000331728 CCT4P50991 539 aaKnown RBP10.61□□□□□ -0.71
LIMK2-201ENST00000331728 CSPP1Q1MSJ5 1256 aa10.61□□□□□ -0.71
LIMK2-201ENST00000331728 ZGPATQ8N5A5 531 aaKnown RBP10.61□□□□□ -0.71
LIMK2-201ENST00000331728 ARHGEF28Q8N1W1 1705 aaKnown RBP10.61□□□□□ -0.71
LIMK2-201ENST00000331728 PIK3R4Q99570 1358 aa10.61□□□□□ -0.71
LIMK2-201ENST00000331728 PHF14O94880 888 aa10.61□□□□□ -0.71
LIMK2-201ENST00000331728 AMPHP49418 695 aa10.61□□□□□ -0.71
LIMK2-201ENST00000331728 MIS18AQ9NYP9 233 aa10.61□□□□□ -0.71
LIMK2-201ENST00000331728 ARHGAP31Q2M1Z3 1444 aa10.61□□□□□ -0.71
LIMK2-201ENST00000331728 SYCE3A1L190 88 aa10.61□□□□□ -0.71
LIMK2-201ENST00000331728 F6X3S4 739 aa10.61□□□□□ -0.71
LIMK2-201ENST00000331728 ZNF500O60304 480 aaPredicted RBP10.61□□□□□ -0.71
LIMK2-201ENST00000331728 ZNF853P0CG23 659 aa10.61□□□□□ -0.71
LIMK2-201ENST00000331728 OS9Q13438 667 aaPredicted RBP10.61□□□□□ -0.71
LIMK2-201ENST00000331728 PLPPR3Q6T4P5 718 aa10.61□□□□□ -0.71
LIMK2-201ENST00000331728 PRIM1P49642 420 aaKnown RBP10.6□□□□□ -0.71
LIMK2-201ENST00000331728 EDC4Q6P2E9 1401 aaKnown RBP10.6□□□□□ -0.71
LIMK2-201ENST00000331728 MSH6P52701 1360 aa10.6□□□□□ -0.71
LIMK2-201ENST00000331728 XPCQ01831 940 aaPredicted RBP10.6□□□□□ -0.71
LIMK2-201ENST00000331728 C14orf37Q86TY3 774 aa10.6□□□□□ -0.71
LIMK2-201ENST00000331728 UQCRHLA0A096LP55 91 aa10.6□□□□□ -0.71
LIMK2-201ENST00000331728 UQCRHP07919 91 aa10.6□□□□□ -0.71
LIMK2-201ENST00000331728 LRRCC1Q9C099 1032 aa10.6□□□□□ -0.71
LIMK2-201ENST00000331728 CCDC39Q9UFE4 941 aa10.6□□□□□ -0.71
LIMK2-201ENST00000331728 NCKAP5LQ9HCH0 1330 aa10.59□□□□□ -0.71
LIMK2-201ENST00000331728 CYP2E1P05181 493 aaPredicted RBP10.59□□□□□ -0.71
LIMK2-201ENST00000331728 GNAI3P08754 354 aa10.59□□□□□ -0.71
LIMK2-201ENST00000331728 PDLIM2Q96JY6 352 aa10.59□□□□□ -0.71
LIMK2-201ENST00000331728 ZKSCAN5Q9Y2L8 839 aa10.59□□□□□ -0.71
LIMK2-201ENST00000331728 KIF24Q5T7B8 1368 aa10.59□□□□□ -0.71
LIMK2-201ENST00000331728 PTPRMP28827 1452 aa10.59□□□□□ -0.71
LIMK2-201ENST00000331728 MCM5P33992 734 aa10.59□□□□□ -0.71
LIMK2-201ENST00000331728 TSHZ3Q63HK5 1081 aa10.59□□□□□ -0.71
LIMK2-201ENST00000331728 ARID3AQ99856 593 aa10.59□□□□□ -0.71
LIMK2-201ENST00000331728 KIAA2012Q0VF49 1180 aa10.59□□□□□ -0.71
LIMK2-201ENST00000331728 PKP1Q13835 747 aa10.59□□□□□ -0.71
LIMK2-201ENST00000331728 EIF4A2Q14240 407 aaKnown RBP10.59□□□□□ -0.71
LIMK2-201ENST00000331728 PDE1AP54750 535 aa10.58□□□□□ -0.72
LIMK2-201ENST00000331728 NGDNQ8NEJ9 315 aaKnown RBP10.58□□□□□ -0.72
LIMK2-201ENST00000331728 ATP7BP35670 1465 aa10.58□□□□□ -0.72
LIMK2-201ENST00000331728 TSPY26PQ9H489 355 aa10.58□□□□□ -0.72
LIMK2-201ENST00000331728 FRMPD1Q5SYB0 1578 aa10.58□□□□□ -0.72
LIMK2-201ENST00000331728 YEATS2Q9ULM3 1422 aa10.58□□□□□ -0.72
LIMK2-201ENST00000331728 ANKRD26Q9UPS8 1709 aa10.58□□□□□ -0.72
LIMK2-201ENST00000331728 LRSAM1Q6UWE0 723 aa10.57□□□□□ -0.72
LIMK2-201ENST00000331728 MTERF4Q7Z6M4 381 aaKnown RBP10.57□□□□□ -0.72
LIMK2-201ENST00000331728 TMX3Q96JJ7 454 aa10.57□□□□□ -0.72
LIMK2-201ENST00000331728 NEO1Q92859 1461 aa10.57□□□□□ -0.72
LIMK2-201ENST00000331728 MX1P20591 662 aa10.57□□□□□ -0.72
LIMK2-201ENST00000331728 UPF3BQ9BZI7 483 aaKnown RBP10.57□□□□□ -0.72
LIMK2-201ENST00000331728 GPT2Q8TD30 523 aa10.57□□□□□ -0.72
LIMK2-201ENST00000331728 RTL1A6NKG5 1358 aa10.56□□□□□ -0.72
LIMK2-201ENST00000331728 CHL1O00533 1208 aa10.56□□□□□ -0.72
LIMK2-201ENST00000331728 DYNC1I1O14576 645 aa10.56□□□□□ -0.72
LIMK2-201ENST00000331728 UBTFL1P0CB47 393 aaPredicted RBP10.56□□□□□ -0.72
LIMK2-201ENST00000331728 KCNJ4P48050 445 aa10.56□□□□□ -0.72
LIMK2-201ENST00000331728 FAM69CQ0P6D2 419 aa10.56□□□□□ -0.72
LIMK2-201ENST00000331728 CCDC30Q5VVM6 783 aa10.56□□□□□ -0.72
LIMK2-201ENST00000331728 LTV1Q96GA3 475 aaPredicted RBP10.56□□□□□ -0.72
LIMK2-201ENST00000331728 HSP90AB2PQ58FF8 381 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms