RNA–Protein interactions for RNA: ENST00000329151.5

TMEM54-201, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best) BASIC

Gene TMEM54, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-201ENST00000329151 TATP17735 454 aaPredicted RBP32.38■■■□□ 2.77
TMEM54-201ENST00000329151 TIMELESSQ9UNS1 1208 aa32.38■■■□□ 2.77
TMEM54-201ENST00000329151 MEGF6O75095 1541 aa32.37■■■□□ 2.77
TMEM54-201ENST00000329151 USHBP1Q8N6Y0 703 aa32.36■■■□□ 2.77
TMEM54-201ENST00000329151 LRRC4BQ9NT99 713 aa32.36■■■□□ 2.77
TMEM54-201ENST00000329151 FLT4P35916 1363 aa32.35■■■□□ 2.77
TMEM54-201ENST00000329151 ZNF827Q17R98 1081 aa32.35■■■□□ 2.77
TMEM54-201ENST00000329151 NBPF6Q5VWK0 638 aa32.35■■■□□ 2.77
TMEM54-201ENST00000329151 NBPF4Q96M43 638 aa32.35■■■□□ 2.77
TMEM54-201ENST00000329151 FHDC1Q9C0D6 1143 aaPredicted RBP32.35■■■□□ 2.77
TMEM54-201ENST00000329151 SHANK3Q9BYB0 1731 aa32.34■■■□□ 2.77
TMEM54-201ENST00000329151 ARXQ96QS3 562 aa32.34■■■□□ 2.77
TMEM54-201ENST00000329151 PCGF6Q9BYE7 350 aa32.34■■■□□ 2.77
TMEM54-201ENST00000329151 TFCP2L1Q9NZI6 479 aa32.33■■■□□ 2.77
TMEM54-201ENST00000329151 INSRP06213 1382 aa32.32■■■□□ 2.77
TMEM54-201ENST00000329151 KIF24Q5T7B8 1368 aa32.32■■■□□ 2.77
TMEM54-201ENST00000329151 SYT17Q9BSW7 474 aa32.32■■■□□ 2.76
TMEM54-201ENST00000329151 NSD3Q9BZ95 1437 aa32.32■■■□□ 2.76
TMEM54-201ENST00000329151 HSP90AB2PQ58FF8 381 aa32.31■■■□□ 2.76
TMEM54-201ENST00000329151 QSER1Q2KHR3 1735 aa32.31■■■□□ 2.76
TMEM54-201ENST00000329151 POLD1P28340 1107 aa32.3■■■□□ 2.76
TMEM54-201ENST00000329151 SLC16A10Q8TF71 515 aa32.3■■■□□ 2.76
TMEM54-201ENST00000329151 POLR3GLQ9BT43 218 aa32.3■■■□□ 2.76
TMEM54-201ENST00000329151 PPM1GO15355 546 aaPredicted RBP32.29■■■□□ 2.76
TMEM54-201ENST00000329151 AKT1S1Q96B36 256 aa32.29■■■□□ 2.76
TMEM54-201ENST00000329151 CCNL1Q9UK58 526 aaPredicted RBP32.29■■■□□ 2.76
TMEM54-201ENST00000329151 LY75O60449 1722 aa32.29■■■□□ 2.76
TMEM54-201ENST00000329151 PCDH11XQ9BZA7 1347 aa32.28■■■□□ 2.76
TMEM54-201ENST00000329151 PCDH11YQ9BZA8 1340 aa32.28■■■□□ 2.76
TMEM54-201ENST00000329151 CLSPNQ9HAW4 1339 aa32.28■■■□□ 2.76
TMEM54-201ENST00000329151 KLHL34Q8N239 644 aa32.28■■■□□ 2.76
TMEM54-201ENST00000329151 HMGB2P26583 209 aaKnown RBP32.26■■■□□ 2.75
TMEM54-201ENST00000329151 SGIP1Q9BQI5 828 aa32.26■■■□□ 2.75
TMEM54-201ENST00000329151 MSH5O43196 834 aa32.25■■■□□ 2.75
TMEM54-201ENST00000329151 KCNQ4P56696 695 aa32.25■■■□□ 2.75
TMEM54-201ENST00000329151 CARD14Q9BXL6 1004 aa32.23■■■□□ 2.75
TMEM54-201ENST00000329151 NSD2O96028 1365 aa32.22■■■□□ 2.75
TMEM54-201ENST00000329151 TUBGCP6Q96RT7 1819 aa32.22■■■□□ 2.75
TMEM54-201ENST00000329151 EMILIN1Q9Y6C2 1016 aa32.22■■■□□ 2.75
TMEM54-201ENST00000329151 PNPLA7Q6ZV29 1317 aa32.22■■■□□ 2.75
TMEM54-201ENST00000329151 MAP2P11137 1827 aaKnown RBP32.21■■■□□ 2.75
TMEM54-201ENST00000329151 CHD4Q14839 1912 aa32.2■■■□□ 2.74
TMEM54-201ENST00000329151 MAP3K5Q99683 1374 aa32.18■■■□□ 2.74
TMEM54-201ENST00000329151 MPRIPQ6WCQ1 1025 aa32.17■■■□□ 2.74
TMEM54-201ENST00000329151 GPR162Q16538 588 aa32.15■■■□□ 2.74
TMEM54-201ENST00000329151 SPG7Q9UQ90 795 aa32.15■■■□□ 2.74
TMEM54-201ENST00000329151 C5P01031 1676 aa32.13■■■□□ 2.73
TMEM54-201ENST00000329151 ANKRD26Q9UPS8 1709 aa32.12■■■□□ 2.73
TMEM54-201ENST00000329151 PALLDQ8WX93 1383 aa32.12■■■□□ 2.73
TMEM54-201ENST00000329151 PELP1Q8IZL8 1130 aaKnown RBP32.12■■■□□ 2.73
TMEM54-201ENST00000329151 SMARCC1Q92922 1105 aaPredicted RBP32.12■■■□□ 2.73
TMEM54-201ENST00000329151 ITGB4P16144 1822 aa32.12■■■□□ 2.73
TMEM54-201ENST00000329151 PKD1L3Q7Z443 1732 aa32.12■■■□□ 2.73
TMEM54-201ENST00000329151 EIF4G2P78344 907 aaKnown RBP eCLIP32.11■■■□□ 2.73
TMEM54-201ENST00000329151 WASHC2AQ641Q2 1341 aa32.1■■■□□ 2.73
TMEM54-201ENST00000329151 CYP27B1O15528 508 aa32.1■■■□□ 2.73
TMEM54-201ENST00000329151 TNNT2P45379 298 aaPredicted RBP32.08■■■□□ 2.73
TMEM54-201ENST00000329151 FLAD1Q8NFF5 587 aa32.08■■■□□ 2.73
TMEM54-201ENST00000329151 COL24A1Q17RW2 1714 aa32.08■■■□□ 2.73
TMEM54-201ENST00000329151 TAF1LQ8IZX4 1826 aa32.06■■■□□ 2.72
TMEM54-201ENST00000329151 CCER1Q8TC90 406 aaPredicted RBP32.06■■■□□ 2.72
TMEM54-201ENST00000329151 UTRNP46939 3433 aa32.06■■■□□ 2.72
TMEM54-201ENST00000329151 COL23A1Q86Y22 540 aaPredicted RBP32.05■■■□□ 2.72
TMEM54-201ENST00000329151 AK7Q96M32 723 aa32.05■■■□□ 2.72
TMEM54-201ENST00000329151 TOGARAM1Q9Y4F4 1720 aa32.04■■■□□ 2.72
TMEM54-201ENST00000329151 EYA1Q99502 592 aa32.04■■■□□ 2.72
TMEM54-201ENST00000329151 POLKQ9UBT6 870 aa32.03■■■□□ 2.72
TMEM54-201ENST00000329151 MSL1Q68DK7 614 aa32.02■■■□□ 2.72
TMEM54-201ENST00000329151 ZNF784Q8NCA9 323 aaPredicted RBP32.02■■■□□ 2.72
TMEM54-201ENST00000329151 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.02■■■□□ 2.72
TMEM54-201ENST00000329151 TMOD3Q9NYL9 352 aa32.02■■■□□ 2.72
TMEM54-201ENST00000329151 NCAPD2Q15021 1401 aa32.01■■■□□ 2.72
TMEM54-201ENST00000329151 HSPA5P11021 654 aaKnown RBP32■■■□□ 2.71
TMEM54-201ENST00000329151 IFNL2Q8IZJ0 200 aa32■■■□□ 2.71
TMEM54-201ENST00000329151 PIGBQ92521 554 aa31.99■■■□□ 2.71
TMEM54-201ENST00000329151 C4BP0C0L5 1744 aa31.98■■■□□ 2.71
TMEM54-201ENST00000329151 NKX1-1Q15270 411 aaPredicted RBP31.98■■■□□ 2.71
TMEM54-201ENST00000329151 PANK3Q9H999 370 aa31.97■■■□□ 2.71
TMEM54-201ENST00000329151 EIF4A2Q14240 407 aaKnown RBP31.96■■■□□ 2.71
TMEM54-201ENST00000329151 NLGN2Q8NFZ4 835 aa31.96■■■□□ 2.71
TMEM54-201ENST00000329151 PHF14O94880 888 aa31.94■■■□□ 2.7
TMEM54-201ENST00000329151 PHKG2P15735 406 aa31.93■■■□□ 2.7
TMEM54-201ENST00000329151 LOC102724428A0A0B4J2F2 783 aa31.92■■■□□ 2.7
TMEM54-201ENST00000329151 GRIN3BO60391 1043 aa31.92■■■□□ 2.7
TMEM54-201ENST00000329151 SIK1P57059 783 aa31.92■■■□□ 2.7
TMEM54-201ENST00000329151 MORC1Q86VD1 984 aa31.91■■■□□ 2.7
TMEM54-201ENST00000329151 UBR3Q6ZT12 1888 aa31.89■■■□□ 2.7
TMEM54-201ENST00000329151 HSP90AB1P08238 724 aaKnown RBP31.89■■■□□ 2.7
TMEM54-201ENST00000329151 PLEKHG2Q9H7P9 1386 aa31.89■■■□□ 2.7
TMEM54-201ENST00000329151 ATP6V1AP38606 617 aa31.88■■■□□ 2.69
TMEM54-201ENST00000329151 PLEKHO1Q53GL0 409 aaPredicted RBP31.88■■■□□ 2.69
TMEM54-201ENST00000329151 KNSTRNQ9Y448 316 aa31.88■■■□□ 2.69
TMEM54-201ENST00000329151 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.87■■■□□ 2.69
TMEM54-201ENST00000329151 SSFA2P28290 1259 aa31.87■■■□□ 2.69
TMEM54-201ENST00000329151 CD2APQ9Y5K6 639 aa31.87■■■□□ 2.69
TMEM54-201ENST00000329151 IGSF1Q8N6C5 1336 aa31.86■■■□□ 2.69
TMEM54-201ENST00000329151 ASAP1Q9ULH1 1129 aa31.86■■■□□ 2.69
TMEM54-201ENST00000329151 GOLGB1Q14789 3259 aaKnown RBP31.84■■■□□ 2.69
TMEM54-201ENST00000329151 GNPATO15228 680 aa31.84■■■□□ 2.69
TMEM54-201ENST00000329151 LINC00116Q8NCU8 138 aa31.83■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms