RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 CCDC125Q86Z20 511 aa6.79□□□□□ -1.32
LRIT3-201ENST00000327908 IFNL2Q8IZJ0 200 aa6.79□□□□□ -1.32
LRIT3-201ENST00000327908 CABLES1Q8TDN4 633 aa6.79□□□□□ -1.32
LRIT3-201ENST00000327908 AKAP4Q5JQC9 854 aa6.79□□□□□ -1.32
LRIT3-201ENST00000327908 QTRT2Q9H974 415 aaKnown RBP6.79□□□□□ -1.32
LRIT3-201ENST00000327908 NFE2L2Q16236 605 aa6.79□□□□□ -1.32
LRIT3-201ENST00000327908 ZCRB1Q8TBF4 217 aaKnown RBP6.79□□□□□ -1.32
LRIT3-201ENST00000327908 SMARCC1Q92922 1105 aaPredicted RBP6.79□□□□□ -1.32
LRIT3-201ENST00000327908 STRN4Q9NRL3 753 aa6.79□□□□□ -1.32
LRIT3-201ENST00000327908 SOX12O15370 315 aa6.78□□□□□ -1.32
LRIT3-201ENST00000327908 HSP90AB2PQ58FF8 381 aa6.78□□□□□ -1.32
LRIT3-201ENST00000327908 EYA1Q99502 592 aa6.78□□□□□ -1.32
LRIT3-201ENST00000327908 CHRNA2Q15822 529 aa6.78□□□□□ -1.32
LRIT3-201ENST00000327908 DDB1Q16531 1140 aa6.78□□□□□ -1.32
LRIT3-201ENST00000327908 ILDR1Q86SU0 546 aaPredicted RBP6.78□□□□□ -1.32
LRIT3-201ENST00000327908 MAP3K5Q99683 1374 aa6.78□□□□□ -1.32
LRIT3-201ENST00000327908 ERVV-2B6SEH9 535 aa6.78□□□□□ -1.32
LRIT3-201ENST00000327908 DCAF5Q96JK2 942 aa6.78□□□□□ -1.32
LRIT3-201ENST00000327908 RSPH6AQ9H0K4 717 aa6.78□□□□□ -1.32
LRIT3-201ENST00000327908 NKX1-1Q15270 411 aaPredicted RBP6.77□□□□□ -1.33
LRIT3-201ENST00000327908 SULT6B1Q6IMI4 303 aa6.77□□□□□ -1.33
LRIT3-201ENST00000327908 FAM196AQ6ZSG2 479 aa6.77□□□□□ -1.33
LRIT3-201ENST00000327908 CT47B1P0C2W7 299 aaPredicted RBP6.77□□□□□ -1.33
LRIT3-201ENST00000327908 WDR63Q8IWG1 891 aa6.77□□□□□ -1.33
LRIT3-201ENST00000327908 LTV1Q96GA3 475 aaPredicted RBP6.77□□□□□ -1.33
LRIT3-201ENST00000327908 ZNF530Q6P9A1 599 aaPredicted RBP6.76□□□□□ -1.33
LRIT3-201ENST00000327908 LARP1Q6PKG0 1096 aaKnown RBP6.76□□□□□ -1.33
LRIT3-201ENST00000327908 GNAT3A8MTJ3 354 aa6.76□□□□□ -1.33
LRIT3-201ENST00000327908 ZNF428Q96B54 188 aa6.76□□□□□ -1.33
LRIT3-201ENST00000327908 LRRC37A3O60309 1634 aa6.76□□□□□ -1.33
LRIT3-201ENST00000327908 RGPD5Q99666 1765 aa6.76□□□□□ -1.33
LRIT3-201ENST00000327908 GLI3P10071 1580 aa6.76□□□□□ -1.33
LRIT3-201ENST00000327908 MRC1P22897 1456 aa6.76□□□□□ -1.33
LRIT3-201ENST00000327908 PRKAR2BP31323 418 aa6.75□□□□□ -1.33
LRIT3-201ENST00000327908 MYH16Q9H6N6 1097 aa6.75□□□□□ -1.33
LRIT3-201ENST00000327908 NBPF6Q5VWK0 638 aa6.75□□□□□ -1.33
LRIT3-201ENST00000327908 NBPF4Q96M43 638 aa6.75□□□□□ -1.33
LRIT3-201ENST00000327908 TEX13AQ9BXU3 409 aaPredicted RBP6.75□□□□□ -1.33
LRIT3-201ENST00000327908 RGPD3A6NKT7 1758 aaPredicted RBP6.75□□□□□ -1.33
LRIT3-201ENST00000327908 RGPD4Q7Z3J3 1758 aa6.75□□□□□ -1.33
LRIT3-201ENST00000327908 ADAMTS7Q9UKP4 1686 aa6.75□□□□□ -1.33
LRIT3-201ENST00000327908 GNAI1P63096 354 aa6.75□□□□□ -1.33
LRIT3-201ENST00000327908 SF3B2Q13435 895 aaKnown RBP6.74□□□□□ -1.33
LRIT3-201ENST00000327908 HOXB7P09629 217 aa6.74□□□□□ -1.33
LRIT3-201ENST00000327908 KRT27Q7Z3Y8 459 aa6.74□□□□□ -1.33
LRIT3-201ENST00000327908 A0A0G2JS52 829 aa6.74□□□□□ -1.33
LRIT3-201ENST00000327908 MYT1Q01538 1121 aa6.74□□□□□ -1.33
LRIT3-201ENST00000327908 TEFQ10587 303 aa6.74□□□□□ -1.33
LRIT3-201ENST00000327908 AXIN2Q9Y2T1 843 aa6.74□□□□□ -1.33
LRIT3-201ENST00000327908 ZNF831Q5JPB2 1677 aa6.74□□□□□ -1.33
LRIT3-201ENST00000327908 MEGF6O75095 1541 aa6.73□□□□□ -1.33
LRIT3-201ENST00000327908 PHKG2P15735 406 aa6.73□□□□□ -1.33
LRIT3-201ENST00000327908 TMPOP42166 694 aaKnown RBP6.73□□□□□ -1.33
LRIT3-201ENST00000327908 SEPT12Q8IYM1 358 aa6.73□□□□□ -1.33
LRIT3-201ENST00000327908 IFT57Q9NWB7 429 aa6.73□□□□□ -1.33
LRIT3-201ENST00000327908 ERBB4Q15303 1308 aa6.73□□□□□ -1.33
LRIT3-201ENST00000327908 NHSQ6T4R5 1651 aa6.73□□□□□ -1.33
LRIT3-201ENST00000327908 PLEKHF1Q96S99 279 aa6.73□□□□□ -1.33
LRIT3-201ENST00000327908 ZBED9Q6R2W3 1325 aa6.73□□□□□ -1.33
LRIT3-201ENST00000327908 CICQ96RK0 1608 aaPredicted RBP6.73□□□□□ -1.33
LRIT3-201ENST00000327908 E9PSI1 815 aa6.72□□□□□ -1.33
LRIT3-201ENST00000327908 RGL2O15211 777 aa6.72□□□□□ -1.33
LRIT3-201ENST00000327908 MIER1Q8N108 512 aa6.72□□□□□ -1.33
LRIT3-201ENST00000327908 ADAMTS8Q9UP79 889 aa6.72□□□□□ -1.33
LRIT3-201ENST00000327908 CABP4P57796 275 aa6.72□□□□□ -1.33
LRIT3-201ENST00000327908 TMOD3Q9NYL9 352 aa6.72□□□□□ -1.33
LRIT3-201ENST00000327908 SCN11AQ9UI33 1791 aa6.72□□□□□ -1.33
LRIT3-201ENST00000327908 CEMIPQ8WUJ3 1361 aa6.71□□□□□ -1.33
LRIT3-201ENST00000327908 RNMTO43148 476 aaKnown RBP6.71□□□□□ -1.33
LRIT3-201ENST00000327908 RIPK4P57078 832 aa6.71□□□□□ -1.33
LRIT3-201ENST00000327908 TTC5Q8N0Z6 440 aa6.71□□□□□ -1.33
LRIT3-201ENST00000327908 VSIG10Q8N0Z9 540 aa6.71□□□□□ -1.33
LRIT3-201ENST00000327908 RGS12O14924 1447 aa6.71□□□□□ -1.33
LRIT3-201ENST00000327908 PLEKHG5O94827 1062 aa6.71□□□□□ -1.34
LRIT3-201ENST00000327908 TAF7Q15545 349 aaPredicted RBP6.71□□□□□ -1.34
LRIT3-201ENST00000327908 FAM98CQ17RN3 349 aaKnown RBP6.71□□□□□ -1.34
LRIT3-201ENST00000327908 HMOX1P09601 288 aa6.71□□□□□ -1.34
LRIT3-201ENST00000327908 MS4A1P11836 297 aa6.71□□□□□ -1.34
LRIT3-201ENST00000327908 BCL11BQ9C0K0 894 aaPredicted RBP6.71□□□□□ -1.34
LRIT3-201ENST00000327908 SLC27A3Q5K4L6 730 aa6.7□□□□□ -1.34
LRIT3-201ENST00000327908 FAM9BQ8IZU0 186 aa6.7□□□□□ -1.34
LRIT3-201ENST00000327908 BAG6P46379 1132 aa6.7□□□□□ -1.34
LRIT3-201ENST00000327908 GOLGA2Q08379 1002 aa6.7□□□□□ -1.34
LRIT3-201ENST00000327908 RGPD2P0DJD1 1756 aa6.7□□□□□ -1.34
LRIT3-201ENST00000327908 CNGB1Q14028 1251 aaPredicted RBP6.7□□□□□ -1.34
LRIT3-201ENST00000327908 SLC52A2Q9HAB3 445 aa6.7□□□□□ -1.34
LRIT3-201ENST00000327908 MTHFSDQ2M296 383 aaKnown RBP6.69□□□□□ -1.34
LRIT3-201ENST00000327908 FLAD1Q8NFF5 587 aa6.69□□□□□ -1.34
LRIT3-201ENST00000327908 CFAP44Q96MT7 982 aa6.69□□□□□ -1.34
LRIT3-201ENST00000327908 CHMP4BQ9H444 224 aaKnown RBP6.69□□□□□ -1.34
LRIT3-201ENST00000327908 A0A087WZG4 1122 aa6.69□□□□□ -1.34
LRIT3-201ENST00000327908 SHANK3Q9BYB0 1731 aa6.69□□□□□ -1.34
LRIT3-201ENST00000327908 FMNL2Q96PY5 1086 aa6.69□□□□□ -1.34
LRIT3-201ENST00000327908 PAPPAQ13219 1627 aa6.69□□□□□ -1.34
LRIT3-201ENST00000327908 APAF1O14727 1248 aa6.68□□□□□ -1.34
LRIT3-201ENST00000327908 NPM2Q86SE8 214 aaKnown RBP6.68□□□□□ -1.34
LRIT3-201ENST00000327908 AEBP1Q8IUX7 1158 aa6.68□□□□□ -1.34
LRIT3-201ENST00000327908 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.68□□□□□ -1.34
LRIT3-201ENST00000327908 HDAC5Q9UQL6 1122 aa6.68□□□□□ -1.34
LRIT3-201ENST00000327908 PLSCR1O15162 318 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms