RNA–Protein interactions for RNA: ENST00000325167.9

CHMP6-201, Transcript of charged multivesicular body protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP6, Length 1,664 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-201ENST00000325167 NUTM2GQ5VZR2 741 aa24.58■■□□□ 1.53
CHMP6-201ENST00000325167 CHL1O00533 1208 aa24.57■■□□□ 1.52
CHMP6-201ENST00000325167 C1orf167Q5SNV9 1468 aa24.57■■□□□ 1.52
CHMP6-201ENST00000325167 MST1RQ04912 1400 aa24.57■■□□□ 1.52
CHMP6-201ENST00000325167 BACH2Q9BYV9 841 aa24.56■■□□□ 1.52
CHMP6-201ENST00000325167 FAM83GA6ND36 823 aa24.56■■□□□ 1.52
CHMP6-201ENST00000325167 MRPL50Q8N5N7 158 aaKnown RBP24.56■■□□□ 1.52
CHMP6-201ENST00000325167 COL16A1Q07092 1604 aaPredicted RBP24.55■■□□□ 1.52
CHMP6-201ENST00000325167 TNNQ9UQP3 1299 aa24.55■■□□□ 1.52
CHMP6-201ENST00000325167 SLIT3O75094 1523 aa24.55■■□□□ 1.52
CHMP6-201ENST00000325167 ANP32AP39687 249 aaKnown RBP24.54■■□□□ 1.52
CHMP6-201ENST00000325167 LTN1O94822 1766 aa24.53■■□□□ 1.52
CHMP6-201ENST00000325167 IGHDP01880 384 aa24.53■■□□□ 1.52
CHMP6-201ENST00000325167 MTHFSDQ2M296 383 aaKnown RBP24.53■■□□□ 1.52
CHMP6-201ENST00000325167 ITPRIPQ8IWB1 547 aa24.53■■□□□ 1.52
CHMP6-201ENST00000325167 DCTN1Q14203 1278 aa24.53■■□□□ 1.52
CHMP6-201ENST00000325167 BRINP3Q76B58 766 aa24.53■■□□□ 1.52
CHMP6-201ENST00000325167 ORAI2Q96SN7 254 aa24.53■■□□□ 1.52
CHMP6-201ENST00000325167 API5Q9BZZ5 524 aaKnown RBP24.53■■□□□ 1.52
CHMP6-201ENST00000325167 CRB1P82279 1406 aa24.53■■□□□ 1.52
CHMP6-201ENST00000325167 FOXO3O43524 673 aa24.51■■□□□ 1.51
CHMP6-201ENST00000325167 BABAM1Q9NWV8 329 aa24.51■■□□□ 1.51
CHMP6-201ENST00000325167 PCDHB15Q9Y5E8 787 aa24.51■■□□□ 1.51
CHMP6-201ENST00000325167 AHDC1Q5TGY3 1603 aaPredicted RBP24.5■■□□□ 1.51
CHMP6-201ENST00000325167 TSPYL6Q8N831 410 aa24.5■■□□□ 1.51
CHMP6-201ENST00000325167 USP19O94966 1318 aa24.5■■□□□ 1.51
CHMP6-201ENST00000325167 JCADQ9P266 1359 aa24.5■■□□□ 1.51
CHMP6-201ENST00000325167 TRPM3Q9HCF6 1732 aaPredicted RBP24.5■■□□□ 1.51
CHMP6-201ENST00000325167 MCM10Q7L590 875 aa24.5■■□□□ 1.51
CHMP6-201ENST00000325167 KRT28Q7Z3Y7 464 aa24.5■■□□□ 1.51
CHMP6-201ENST00000325167 TMEM57Q8N5G2 664 aa24.5■■□□□ 1.51
CHMP6-201ENST00000325167 C8orf58Q8NAV2 365 aa24.5■■□□□ 1.51
CHMP6-201ENST00000325167 HDAC1Q13547 482 aaPredicted RBP24.49■■□□□ 1.51
CHMP6-201ENST00000325167 RGS17Q9UGC6 210 aaPredicted RBP24.49■■□□□ 1.51
CHMP6-201ENST00000325167 GNAT3A8MTJ3 354 aa24.48■■□□□ 1.51
CHMP6-201ENST00000325167 SOS1Q07889 1333 aaPredicted RBP24.48■■□□□ 1.51
CHMP6-201ENST00000325167 FAM161AQ3B820 660 aa24.47■■□□□ 1.51
CHMP6-201ENST00000325167 GCP02774 474 aa24.46■■□□□ 1.51
CHMP6-201ENST00000325167 MAP3K5Q99683 1374 aa24.46■■□□□ 1.51
CHMP6-201ENST00000325167 ZBTB40Q9NUA8 1239 aa24.46■■□□□ 1.51
CHMP6-201ENST00000325167 LRRC37A3O60309 1634 aa24.45■■□□□ 1.5
CHMP6-201ENST00000325167 ABCC4O15439 1325 aa24.45■■□□□ 1.5
CHMP6-201ENST00000325167 ARHGEF25Q86VW2 580 aa24.45■■□□□ 1.5
CHMP6-201ENST00000325167 ELL2O00472 640 aaPredicted RBP24.43■■□□□ 1.5
CHMP6-201ENST00000325167 DDX17Q92841 729 aaKnown RBP24.43■■□□□ 1.5
CHMP6-201ENST00000325167 LTV1Q96GA3 475 aaPredicted RBP24.43■■□□□ 1.5
CHMP6-201ENST00000325167 TSPYL4Q9UJ04 414 aa24.43■■□□□ 1.5
CHMP6-201ENST00000325167 PTPRCP08575 1304 aa24.42■■□□□ 1.5
CHMP6-201ENST00000325167 RGS3P49796 1198 aa24.42■■□□□ 1.5
CHMP6-201ENST00000325167 NHSL1Q5SYE7 1610 aa24.42■■□□□ 1.5
CHMP6-201ENST00000325167 NPHP3Q7Z494 1330 aa24.41■■□□□ 1.5
CHMP6-201ENST00000325167 LRP6O75581 1613 aa24.4■■□□□ 1.5
CHMP6-201ENST00000325167 NCAPD2Q15021 1401 aa24.4■■□□□ 1.5
CHMP6-201ENST00000325167 ALS2Q96Q42 1657 aa24.39■■□□□ 1.5
CHMP6-201ENST00000325167 AMOTQ4VCS5 1084 aa24.38■■□□□ 1.49
CHMP6-201ENST00000325167 LMOD2Q6P5Q4 547 aa24.38■■□□□ 1.49
CHMP6-201ENST00000325167 CHMP4AQ9BY43 222 aa24.38■■□□□ 1.49
CHMP6-201ENST00000325167 ZBTB7BO15156 539 aaPredicted RBP24.37■■□□□ 1.49
CHMP6-201ENST00000325167 SKAP1Q86WV1 359 aa24.37■■□□□ 1.49
CHMP6-201ENST00000325167 IPO9Q96P70 1041 aaKnown RBP24.37■■□□□ 1.49
CHMP6-201ENST00000325167 XPCQ01831 940 aaPredicted RBP24.37■■□□□ 1.49
CHMP6-201ENST00000325167 PLEKHO1Q53GL0 409 aaPredicted RBP24.37■■□□□ 1.49
CHMP6-201ENST00000325167 NBPF6Q5VWK0 638 aa24.37■■□□□ 1.49
CHMP6-201ENST00000325167 POTEAQ6S8J7 498 aa24.37■■□□□ 1.49
CHMP6-201ENST00000325167 NBPF4Q96M43 638 aa24.37■■□□□ 1.49
CHMP6-201ENST00000325167 PDZRN3Q9UPQ7 1066 aa24.37■■□□□ 1.49
CHMP6-201ENST00000325167 SPATA31A6Q5VVP1 1343 aa24.36■■□□□ 1.49
CHMP6-201ENST00000325167 TAF7Q15545 349 aaPredicted RBP24.36■■□□□ 1.49
CHMP6-201ENST00000325167 ERICH6Q7L0X2 663 aa24.36■■□□□ 1.49
CHMP6-201ENST00000325167 SMC5Q8IY18 1101 aa24.35■■□□□ 1.49
CHMP6-201ENST00000325167 ABCC6O95255 1503 aa24.35■■□□□ 1.49
CHMP6-201ENST00000325167 C8orf34Q49A92 452 aa24.34■■□□□ 1.49
CHMP6-201ENST00000325167 INTS3Q68E01 1043 aaKnown RBP24.34■■□□□ 1.49
CHMP6-201ENST00000325167 CAMTA1Q9Y6Y1 1673 aa24.34■■□□□ 1.49
CHMP6-201ENST00000325167 ZBTB7CA1YPR0 619 aa24.34■■□□□ 1.49
CHMP6-201ENST00000325167 NUTM2BA6NNL0 878 aaPredicted RBP24.34■■□□□ 1.49
CHMP6-201ENST00000325167 NUTM2EB1AL46 878 aaPredicted RBP24.34■■□□□ 1.49
CHMP6-201ENST00000325167 MEX3CQ5U5Q3 659 aaKnown RBP24.34■■□□□ 1.49
CHMP6-201ENST00000325167 NUTM2AQ8IVF1 878 aaPredicted RBP24.34■■□□□ 1.49
CHMP6-201ENST00000325167 CEMIPQ8WUJ3 1361 aa24.33■■□□□ 1.49
CHMP6-201ENST00000325167 PLEKHG2Q9H7P9 1386 aa24.33■■□□□ 1.49
CHMP6-201ENST00000325167 ANKRD24Q8TF21 1146 aa24.33■■□□□ 1.49
CHMP6-201ENST00000325167 OVOS2A0A0G2JMS6 1433 aa24.32■■□□□ 1.48
CHMP6-201ENST00000325167 TNS3Q68CZ2 1445 aa24.32■■□□□ 1.48
CHMP6-201ENST00000325167 MSH5O43196 834 aa24.32■■□□□ 1.48
CHMP6-201ENST00000325167 AKAP4Q5JQC9 854 aa24.32■■□□□ 1.48
CHMP6-201ENST00000325167 IL17REQ8NFR9 667 aa24.32■■□□□ 1.48
CHMP6-201ENST00000325167 USHBP1Q8N6Y0 703 aa24.31■■□□□ 1.48
CHMP6-201ENST00000325167 STK31Q9BXU1 1019 aa24.31■■□□□ 1.48
CHMP6-201ENST00000325167 CCDC30Q5VVM6 783 aa24.3■■□□□ 1.48
CHMP6-201ENST00000325167 LRRC59Q96AG4 307 aaKnown RBP24.3■■□□□ 1.48
CHMP6-201ENST00000325167 GCC1Q96CN9 775 aa24.3■■□□□ 1.48
CHMP6-201ENST00000325167 DDRGK1Q96HY6 314 aa24.3■■□□□ 1.48
CHMP6-201ENST00000325167 KRT24Q2M2I5 525 aa24.29■■□□□ 1.48
CHMP6-201ENST00000325167 LMO7Q8WWI1 1683 aa24.29■■□□□ 1.48
CHMP6-201ENST00000325167 SLC4A2P04920 1241 aa24.27■■□□□ 1.48
CHMP6-201ENST00000325167 MIS18AQ9NYP9 233 aa24.27■■□□□ 1.48
CHMP6-201ENST00000325167 NOP58Q9Y2X3 529 aaKnown RBP24.27■■□□□ 1.48
CHMP6-201ENST00000325167 HOXB7P09629 217 aa24.27■■□□□ 1.48
CHMP6-201ENST00000325167 RGS12O14924 1447 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms