RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 G2E3Q7L622 706 aa21.64■■□□□ 1.05
COL9A1-201ENST00000320755 LTV1Q96GA3 475 aaPredicted RBP21.63■■□□□ 1.05
COL9A1-201ENST00000320755 MON2Q7Z3U7 1717 aa21.63■■□□□ 1.05
COL9A1-201ENST00000320755 USP6P35125 1406 aa21.62■■□□□ 1.05
COL9A1-201ENST00000320755 MSH6P52701 1360 aa21.62■■□□□ 1.05
COL9A1-201ENST00000320755 CEP85Q6P2H3 762 aa21.62■■□□□ 1.05
COL9A1-201ENST00000320755 ANKRD44Q8N8A2 993 aa21.62■■□□□ 1.05
COL9A1-201ENST00000320755 SNX21Q969T3 373 aa21.62■■□□□ 1.05
COL9A1-201ENST00000320755 ITSN1Q15811 1721 aa21.62■■□□□ 1.05
COL9A1-201ENST00000320755 C3P01024 1663 aa21.62■■□□□ 1.05
COL9A1-201ENST00000320755 HAP1P54257 671 aaPredicted RBP21.61■■□□□ 1.05
COL9A1-201ENST00000320755 NLRP6P59044 892 aa21.6■■□□□ 1.05
COL9A1-201ENST00000320755 C14orf37Q86TY3 774 aa21.6■■□□□ 1.05
COL9A1-201ENST00000320755 TNPO1Q92973 898 aaKnown RBP21.6■■□□□ 1.05
COL9A1-201ENST00000320755 EYA1Q99502 592 aa21.59■■□□□ 1.05
COL9A1-201ENST00000320755 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.59■■□□□ 1.05
COL9A1-201ENST00000320755 OVOS2A0A0J9YW53 1432 aa21.59■■□□□ 1.05
COL9A1-201ENST00000320755 OVOS2Q6IE36 1432 aa21.59■■□□□ 1.05
COL9A1-201ENST00000320755 GOLGA6L3A6NEY3 463 aa21.59■■□□□ 1.05
COL9A1-201ENST00000320755 TTC22Q5TAA0 569 aa21.59■■□□□ 1.05
COL9A1-201ENST00000320755 RPAP2Q8IXW5 612 aaPredicted RBP21.59■■□□□ 1.05
COL9A1-201ENST00000320755 AKAP12Q02952 1782 aa21.58■■□□□ 1.05
COL9A1-201ENST00000320755 PTPRUQ92729 1446 aa21.58■■□□□ 1.05
COL9A1-201ENST00000320755 PLEKHG5O94827 1062 aa21.58■■□□□ 1.04
COL9A1-201ENST00000320755 L1TD1Q5T7N2 865 aaKnown RBP21.58■■□□□ 1.04
COL9A1-201ENST00000320755 ANO8Q9HCE9 1232 aaPredicted RBP21.57■■□□□ 1.04
COL9A1-201ENST00000320755 K7ELQ4 463 aaPredicted RBP21.57■■□□□ 1.04
COL9A1-201ENST00000320755 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.57■■□□□ 1.04
COL9A1-201ENST00000320755 RTL1A6NKG5 1358 aa21.56■■□□□ 1.04
COL9A1-201ENST00000320755 PLEKHG1Q9ULL1 1385 aa21.56■■□□□ 1.04
COL9A1-201ENST00000320755 GAS2L2Q8NHY3 880 aa21.56■■□□□ 1.04
COL9A1-201ENST00000320755 RGS12O14924 1447 aa21.55■■□□□ 1.04
COL9A1-201ENST00000320755 PTPRCP08575 1304 aa21.55■■□□□ 1.04
COL9A1-201ENST00000320755 SDSP20132 328 aa21.55■■□□□ 1.04
COL9A1-201ENST00000320755 XRCC6P12956 609 aaKnown RBP eCLIP21.55■■□□□ 1.04
COL9A1-201ENST00000320755 PANK2Q9BZ23 570 aa21.55■■□□□ 1.04
COL9A1-201ENST00000320755 KNDC1Q76NI1 1749 aa21.54■■□□□ 1.04
COL9A1-201ENST00000320755 KIAA0232Q92628 1395 aa21.54■■□□□ 1.04
COL9A1-201ENST00000320755 TSHZ3Q63HK5 1081 aa21.54■■□□□ 1.04
COL9A1-201ENST00000320755 RBM33Q96EV2 1170 aaKnown RBP21.54■■□□□ 1.04
COL9A1-201ENST00000320755 UBR1Q8IWV7 1749 aa21.54■■□□□ 1.04
COL9A1-201ENST00000320755 DDX11L8A8MPP1 907 aa21.54■■□□□ 1.04
COL9A1-201ENST00000320755 DDIT3P35638 169 aa21.54■■□□□ 1.04
COL9A1-201ENST00000320755 CRB1P82279 1406 aa21.54■■□□□ 1.04
COL9A1-201ENST00000320755 ATP10DQ9P241 1426 aa21.54■■□□□ 1.04
COL9A1-201ENST00000320755 STK31Q9BXU1 1019 aa21.53■■□□□ 1.04
COL9A1-201ENST00000320755 EXOC6BQ9Y2D4 811 aa21.53■■□□□ 1.04
COL9A1-201ENST00000320755 ZBTB7CA1YPR0 619 aa21.53■■□□□ 1.04
COL9A1-201ENST00000320755 FKBP5Q13451 457 aaPredicted RBP21.53■■□□□ 1.04
COL9A1-201ENST00000320755 KIF24Q5T7B8 1368 aa21.53■■□□□ 1.04
COL9A1-201ENST00000320755 PEAK1Q9H792 1746 aa21.53■■□□□ 1.04
COL9A1-201ENST00000320755 USHBP1Q8N6Y0 703 aa21.52■■□□□ 1.04
COL9A1-201ENST00000320755 FLT4P35916 1363 aa21.52■■□□□ 1.04
COL9A1-201ENST00000320755 USP31Q70CQ4 1352 aa21.52■■□□□ 1.03
COL9A1-201ENST00000320755 SSFA2P28290 1259 aa21.51■■□□□ 1.03
COL9A1-201ENST00000320755 GBP4Q96PP9 640 aa21.51■■□□□ 1.03
COL9A1-201ENST00000320755 TTC21AQ8NDW8 1320 aa21.51■■□□□ 1.03
COL9A1-201ENST00000320755 HMMRO75330 724 aa21.5■■□□□ 1.03
COL9A1-201ENST00000320755 ABTB2Q8N961 1025 aa21.5■■□□□ 1.03
COL9A1-201ENST00000320755 NCOA3Q9Y6Q9 1424 aa21.5■■□□□ 1.03
COL9A1-201ENST00000320755 USP26Q9BXU7 913 aa21.5■■□□□ 1.03
COL9A1-201ENST00000320755 RAB3GAP1Q15042 981 aa21.49■■□□□ 1.03
COL9A1-201ENST00000320755 CASC1Q6TDU7 716 aa21.49■■□□□ 1.03
COL9A1-201ENST00000320755 RIMS1Q86UR5 1692 aaKnown RBP21.49■■□□□ 1.03
COL9A1-201ENST00000320755 SBNO1A3KN83 1393 aa21.49■■□□□ 1.03
COL9A1-201ENST00000320755 KCNA6P17658 529 aa21.48■■□□□ 1.03
COL9A1-201ENST00000320755 CIZ1Q9ULV3 898 aaPredicted RBP21.48■■□□□ 1.03
COL9A1-201ENST00000320755 TBX22Q9Y458 520 aa21.48■■□□□ 1.03
COL9A1-201ENST00000320755 ARHGEF10O15013 1369 aa21.48■■□□□ 1.03
COL9A1-201ENST00000320755 NRKQ7Z2Y5 1582 aa21.48■■□□□ 1.03
COL9A1-201ENST00000320755 KIF13AQ9H1H9 1805 aa21.48■■□□□ 1.03
COL9A1-201ENST00000320755 CCT4P50991 539 aaKnown RBP21.47■■□□□ 1.03
COL9A1-201ENST00000320755 GNAT3A8MTJ3 354 aa21.47■■□□□ 1.03
COL9A1-201ENST00000320755 FLIIQ13045 1269 aa21.47■■□□□ 1.03
COL9A1-201ENST00000320755 GNAI2P04899 355 aa21.47■■□□□ 1.03
COL9A1-201ENST00000320755 SSH2Q76I76 1423 aa21.46■■□□□ 1.03
COL9A1-201ENST00000320755 IGSF1Q8N6C5 1336 aa21.46■■□□□ 1.03
COL9A1-201ENST00000320755 FSD2A1L4K1 749 aa21.46■■□□□ 1.03
COL9A1-201ENST00000320755 RABEP1Q15276 862 aa21.46■■□□□ 1.03
COL9A1-201ENST00000320755 HOXC9P31274 260 aa21.45■■□□□ 1.02
COL9A1-201ENST00000320755 THEMISQ8N1K5 641 aaPredicted RBP21.45■■□□□ 1.02
COL9A1-201ENST00000320755 CEP170BQ9Y4F5 1589 aaPredicted RBP21.45■■□□□ 1.02
COL9A1-201ENST00000320755 IL17REQ8NFR9 667 aa21.44■■□□□ 1.02
COL9A1-201ENST00000320755 PDE1AP54750 535 aa21.44■■□□□ 1.02
COL9A1-201ENST00000320755 CCDC30Q5VVM6 783 aa21.44■■□□□ 1.02
COL9A1-201ENST00000320755 PNMA6EA0A0J9YXQ4 647 aa21.44■■□□□ 1.02
COL9A1-201ENST00000320755 FAM43AQ8N2R8 423 aa21.44■■□□□ 1.02
COL9A1-201ENST00000320755 EIF2S2P20042 333 aaKnown RBP21.43■■□□□ 1.02
COL9A1-201ENST00000320755 RGPD8O14715 1765 aaPredicted RBP21.42■■□□□ 1.02
COL9A1-201ENST00000320755 RILPL2Q969X0 211 aa21.42■■□□□ 1.02
COL9A1-201ENST00000320755 TRIM6-TRIM34B2RNG4 842 aa21.41■■□□□ 1.02
COL9A1-201ENST00000320755 LRRFIP2Q9Y608 721 aaKnown RBP21.41■■□□□ 1.02
COL9A1-201ENST00000320755 KDRP35968 1356 aa21.41■■□□□ 1.02
COL9A1-201ENST00000320755 AK9Q5TCS8 1911 aa21.41■■□□□ 1.02
COL9A1-201ENST00000320755 RRAGDQ9NQL2 400 aaPredicted RBP21.41■■□□□ 1.02
COL9A1-201ENST00000320755 REC8O95072 547 aa21.4■■□□□ 1.02
COL9A1-201ENST00000320755 PKP1Q13835 747 aa21.4■■□□□ 1.02
COL9A1-201ENST00000320755 GRPEL1Q9HAV7 217 aa21.4■■□□□ 1.02
COL9A1-201ENST00000320755 ERC2O15083 957 aa21.4■■□□□ 1.02
COL9A1-201ENST00000320755 TOPAZ1Q8N9V7 1692 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms