RNA–Protein interactions for RNA: ENST00000319792.7

NECTIN3-201, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NECTIN3, Length 1,549 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-201ENST00000319792 PLEKHO1Q53GL0 409 aaPredicted RBP40.68■■■■■ 4.1
NECTIN3-201ENST00000319792 TSR2Q969E8 191 aaKnown RBP40.68■■■■■ 4.1
NECTIN3-201ENST00000319792 GNAT3A8MTJ3 354 aa40.67■■■■■ 4.1
NECTIN3-201ENST00000319792 FKBP8Q14318 412 aa40.67■■■■■ 4.1
NECTIN3-201ENST00000319792 CRB1P82279 1406 aa40.67■■■■■ 4.1
NECTIN3-201ENST00000319792 RTF1Q92541 710 aaKnown RBP40.67■■■■■ 4.1
NECTIN3-201ENST00000319792 CFAP44Q96MT7 982 aa40.67■■■■■ 4.1
NECTIN3-201ENST00000319792 PKD1L3Q7Z443 1732 aa40.66■■■■■ 4.1
NECTIN3-201ENST00000319792 RRP1P56182 461 aaKnown RBP40.66■■■■■ 4.1
NECTIN3-201ENST00000319792 MCM10Q7L590 875 aa40.66■■■■■ 4.1
NECTIN3-201ENST00000319792 CT47B1P0C2W7 299 aaPredicted RBP40.65■■■■■ 4.1
NECTIN3-201ENST00000319792 MEGF6O75095 1541 aa40.65■■■■■ 4.1
NECTIN3-201ENST00000319792 PARP4Q9UKK3 1724 aaKnown RBP40.64■■■■■ 4.1
NECTIN3-201ENST00000319792 VIRMAQ69YN4 1812 aaKnown RBP40.64■■■■■ 4.1
NECTIN3-201ENST00000319792 PLCH1Q4KWH8 1693 aa40.63■■■■■ 4.1
NECTIN3-201ENST00000319792 RAPGEF4Q8WZA2 1011 aa40.62■■■■■ 4.09
NECTIN3-201ENST00000319792 TATP17735 454 aaPredicted RBP40.59■■■■■ 4.09
NECTIN3-201ENST00000319792 EXOSC9Q06265 439 aaKnown RBP40.59■■■■■ 4.09
NECTIN3-201ENST00000319792 CARD10Q9BWT7 1032 aa40.59■■■■■ 4.09
NECTIN3-201ENST00000319792 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP40.59■■■■■ 4.093e-7■■□□□ 11.7
NECTIN3-201ENST00000319792 ADAMTS7Q9UKP4 1686 aa40.59■■■■■ 4.09
NECTIN3-201ENST00000319792 JCADQ9P266 1359 aa40.58■■■■■ 4.09
NECTIN3-201ENST00000319792 AKAP4Q5JQC9 854 aa40.58■■■■■ 4.09
NECTIN3-201ENST00000319792 ZNF530Q6P9A1 599 aaPredicted RBP40.58■■■■■ 4.09
NECTIN3-201ENST00000319792 TOM1L2Q6ZVM7 507 aa40.58■■■■■ 4.09
NECTIN3-201ENST00000319792 MBIPQ9NS73 344 aa40.58■■■■■ 4.09
NECTIN3-201ENST00000319792 LAS1LQ9Y4W2 734 aaKnown RBP40.58■■■■■ 4.09
NECTIN3-201ENST00000319792 NRAPQ86VF7 1730 aa40.56■■■■■ 4.08
NECTIN3-201ENST00000319792 CEMIPQ8WUJ3 1361 aa40.56■■■■■ 4.08
NECTIN3-201ENST00000319792 OVOS2A0A0G2JMS6 1433 aa40.56■■■■■ 4.08
NECTIN3-201ENST00000319792 CHL1O00533 1208 aa40.56■■■■■ 4.08
NECTIN3-201ENST00000319792 BTG4Q9NY30 223 aa40.56■■■■■ 4.08
NECTIN3-201ENST00000319792 ERICH6BQ5W0A0 696 aa40.55■■■■■ 4.08
NECTIN3-201ENST00000319792 EVA1CP58658 441 aa40.54■■■■■ 4.08
NECTIN3-201ENST00000319792 IL17REQ8NFR9 667 aa40.54■■■■■ 4.08
NECTIN3-201ENST00000319792 NWD2Q9ULI1 1742 aa40.54■■■■■ 4.08
NECTIN3-201ENST00000319792 IRX6P78412 446 aaPredicted RBP40.53■■■■■ 4.08
NECTIN3-201ENST00000319792 LARP1Q6PKG0 1096 aaKnown RBP40.53■■■■■ 4.08
NECTIN3-201ENST00000319792 STRN4Q9NRL3 753 aa40.52■■■■■ 4.08
NECTIN3-201ENST00000319792 RARSP54136 660 aaKnown RBP40.51■■■■■ 4.08
NECTIN3-201ENST00000319792 C1orf141Q5JVX7 400 aa40.5■■■■■ 4.07
NECTIN3-201ENST00000319792 SPG7Q9UQ90 795 aa40.5■■■■■ 4.07
NECTIN3-201ENST00000319792 SCN11AQ9UI33 1791 aa40.48■■■■■ 4.07
NECTIN3-201ENST00000319792 BABAM1Q9NWV8 329 aa40.47■■■■■ 4.07
NECTIN3-201ENST00000319792 SIPA1L3O60292 1781 aaPredicted RBP40.45■■■■■ 4.07
NECTIN3-201ENST00000319792 BCAR3O75815 825 aa40.45■■■■■ 4.07
NECTIN3-201ENST00000319792 ADAMTS2O95450 1211 aa40.45■■■■■ 4.07
NECTIN3-201ENST00000319792 GOLGA6L2Q8N9W4 650 aaPredicted RBP40.45■■■■■ 4.07
NECTIN3-201ENST00000319792 ZNF428Q96B54 188 aa40.45■■■■■ 4.07
NECTIN3-201ENST00000319792 WNK3Q9BYP7 1800 aa40.44■■■■■ 4.06
NECTIN3-201ENST00000319792 SHANK3Q9BYB0 1731 aa40.44■■■■■ 4.06
NECTIN3-201ENST00000319792 NUTM2BA6NNL0 878 aaPredicted RBP40.42■■■■■ 4.06
NECTIN3-201ENST00000319792 NUTM2EB1AL46 878 aaPredicted RBP40.42■■■■■ 4.06
NECTIN3-201ENST00000319792 NUTM2AQ8IVF1 878 aaPredicted RBP40.42■■■■■ 4.06
NECTIN3-201ENST00000319792 SLIT2O94813 1529 aa40.42■■■■■ 4.06
NECTIN3-201ENST00000319792 KDM3BQ7LBC6 1761 aa40.42■■■■■ 4.06
NECTIN3-201ENST00000319792 RNMTO43148 476 aaKnown RBP40.41■■■■■ 4.06
NECTIN3-201ENST00000319792 PLIN1O60240 522 aa40.41■■■■■ 4.06
NECTIN3-201ENST00000319792 IL2RBP14784 551 aa40.41■■■■■ 4.06
NECTIN3-201ENST00000319792 LGR6Q9HBX8 967 aa40.41■■■■■ 4.06
NECTIN3-201ENST00000319792 SPATA31A6Q5VVP1 1343 aa40.4■■■■■ 4.06
NECTIN3-201ENST00000319792 PHKG2P15735 406 aa40.4■■■■■ 4.06
NECTIN3-201ENST00000319792 TAF7Q15545 349 aaPredicted RBP40.4■■■■■ 4.06
NECTIN3-201ENST00000319792 TSPYL4Q9UJ04 414 aa40.39■■■■■ 4.06
NECTIN3-201ENST00000319792 MPRIPQ6WCQ1 1025 aa40.38■■■■■ 4.06
NECTIN3-201ENST00000319792 VAMP4O75379 141 aa40.37■■■■■ 4.05
NECTIN3-201ENST00000319792 IFNL2Q8IZJ0 200 aa40.37■■■■■ 4.05
NECTIN3-201ENST00000319792 DISP2A7MBM2 1401 aa40.37■■■■■ 4.05
NECTIN3-201ENST00000319792 C8orf58Q8NAV2 365 aa40.37■■■■■ 4.05
NECTIN3-201ENST00000319792 KDM6AO15550 1401 aaPredicted RBP40.36■■■■■ 4.05
NECTIN3-201ENST00000319792 ALDH1L2Q3SY69 923 aa40.36■■■■■ 4.05
NECTIN3-201ENST00000319792 TSPYL6Q8N831 410 aa40.36■■■■■ 4.05
NECTIN3-201ENST00000319792 TWISTNBQ3B726 338 aaPredicted RBP40.35■■■■■ 4.05
NECTIN3-201ENST00000319792 CYP27B1O15528 508 aa40.34■■■■■ 4.05
NECTIN3-201ENST00000319792 HSPA1LP34931 641 aa40.34■■■■■ 4.05
NECTIN3-201ENST00000319792 ZCRB1Q8TBF4 217 aaKnown RBP40.33■■■■■ 4.05
NECTIN3-201ENST00000319792 SSH1Q8WYL5 1049 aa40.33■■■■■ 4.05
NECTIN3-201ENST00000319792 MIS18AQ9NYP9 233 aa40.33■■■■■ 4.05
NECTIN3-201ENST00000319792 MRC1P22897 1456 aa40.33■■■■■ 4.05
NECTIN3-201ENST00000319792 PCDH11XQ9BZA7 1347 aa40.32■■■■■ 4.05
NECTIN3-201ENST00000319792 PCDH11YQ9BZA8 1340 aa40.32■■■■■ 4.05
NECTIN3-201ENST00000319792 LRP6O75581 1613 aa40.31■■■■■ 4.04
NECTIN3-201ENST00000319792 HSP90AB1P08238 724 aaKnown RBP40.31■■■■■ 4.04
NECTIN3-201ENST00000319792 TEFQ10587 303 aa40.31■■■■■ 4.04
NECTIN3-201ENST00000319792 BRPF1P55201 1214 aaPredicted RBP40.29■■■■■ 4.04
NECTIN3-201ENST00000319792 SMC4Q9NTJ3 1288 aa40.29■■■■■ 4.04
NECTIN3-201ENST00000319792 BCL2L13Q9BXK5 485 aa40.28■■■■■ 4.04
NECTIN3-201ENST00000319792 DCAF5Q96JK2 942 aa40.27■■■■■ 4.04
NECTIN3-201ENST00000319792 C20orf194Q5TEA3 1177 aa40.26■■■■■ 4.03
NECTIN3-201ENST00000319792 USP35Q9P2H5 1018 aa40.26■■■■■ 4.03
NECTIN3-201ENST00000319792 TNKS1BP1Q9C0C2 1729 aaKnown RBP40.25■■■■■ 4.03
NECTIN3-201ENST00000319792 SOS1Q07889 1333 aaPredicted RBP40.25■■■■■ 4.03
NECTIN3-201ENST00000319792 ELL2O00472 640 aaPredicted RBP40.24■■■■■ 4.03
NECTIN3-201ENST00000319792 PDE3AQ14432 1141 aa40.24■■■■■ 4.03
NECTIN3-201ENST00000319792 KRT24Q2M2I5 525 aa40.24■■■■■ 4.03
NECTIN3-201ENST00000319792 SPATA31A1Q5TZJ5 1347 aa40.23■■■■■ 4.03
NECTIN3-201ENST00000319792 PPP4R2Q9NY27 417 aa40.23■■■■■ 4.03
NECTIN3-201ENST00000319792 THRAP3Q9Y2W1 955 aaKnown RBP40.22■■■■■ 4.03
NECTIN3-201ENST00000319792 NKX1-1Q15270 411 aaPredicted RBP40.21■■■■■ 4.03
NECTIN3-201ENST00000319792 KIF16BQ96L93 1317 aa40.21■■■■■ 4.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms