RNA–Protein interactions for RNA: ENST00000316848.9

MINDY2-201, Transcript of MINDY lysine 48 deubiquitinase 2, humanhuman

TSL 1 (best)

Gene MINDY2, Length 4,866 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY2-201ENST00000316848 WDR97A6NE52 1622 aa21.33■■□□□ 1
MINDY2-201ENST00000316848 CDK13Q14004 1512 aaKnown RBP21.32■■□□□ 1
MINDY2-201ENST00000316848 SERPINC1P01008 464 aa21.32■■□□□ 1
MINDY2-201ENST00000316848 TTLL5Q6EMB2 1281 aa21.32■■□□□ 1
MINDY2-201ENST00000316848 ALDH1L2Q3SY69 923 aa21.32■■□□□ 1
MINDY2-201ENST00000316848 HSP90AB2PQ58FF8 381 aa21.32■■□□□ 1
MINDY2-201ENST00000316848 UBAC1Q9BSL1 405 aa21.32■■□□□ 1
MINDY2-201ENST00000316848 MAGI1Q96QZ7 1491 aaPredicted RBP21.31■■□□□ 1
MINDY2-201ENST00000316848 STARD3NLO95772 234 aa21.31■■□□□ 1
MINDY2-201ENST00000316848 NUP133Q8WUM0 1156 aa21.31■■□□□ 1
MINDY2-201ENST00000316848 NUTM2BA6NNL0 878 aaPredicted RBP21.31■■□□□ 1
MINDY2-201ENST00000316848 NUTM2EB1AL46 878 aaPredicted RBP21.31■■□□□ 1
MINDY2-201ENST00000316848 GLRX3O76003 335 aaKnown RBP21.31■■□□□ 1
MINDY2-201ENST00000316848 TDO2P48775 406 aa21.31■■□□□ 1
MINDY2-201ENST00000316848 NUTM2AQ8IVF1 878 aaPredicted RBP21.31■■□□□ 1
MINDY2-201ENST00000316848 EXOC6BQ9Y2D4 811 aa21.3■■□□□ 1
MINDY2-201ENST00000316848 HMGB2P26583 209 aaKnown RBP21.3■■□□□ 1
MINDY2-201ENST00000316848 PHF23Q9BUL5 403 aaPredicted RBP21.3■■□□□ 1
MINDY2-201ENST00000316848 LUC7LQ9NQ29 371 aaKnown RBP21.3■■□□□ 1
MINDY2-201ENST00000316848 LARP1Q6PKG0 1096 aaKnown RBP21.29■■□□□ 1
MINDY2-201ENST00000316848 RAB11FIP3O75154 756 aa21.29■■□□□ 1
MINDY2-201ENST00000316848 ARHGEF11O15085 1522 aa21.29■■□□□ 1
MINDY2-201ENST00000316848 SYCP1Q15431 976 aa21.29■■□□□ 1
MINDY2-201ENST00000316848 SPATA32Q96LK8 384 aa21.29■■□□□ 1
MINDY2-201ENST00000316848 PATL2C9JE40 543 aaKnown RBP21.28■■□□□ 1
MINDY2-201ENST00000316848 IGHMBP2P38935 993 aaKnown RBP21.28■■□□□ 1
MINDY2-201ENST00000316848 XPCQ01831 940 aaPredicted RBP21.28■■□□□ 1
MINDY2-201ENST00000316848 WAPLQ7Z5K2 1190 aa21.28■■□□□ 1
MINDY2-201ENST00000316848 CC2D2AQ9P2K1 1620 aa21.28■■□□□ 1
MINDY2-201ENST00000316848 PPFIBP1Q86W92 1011 aa21.28■■□□□ 1
MINDY2-201ENST00000316848 AMOTQ4VCS5 1084 aa21.28■■□□□ 1
MINDY2-201ENST00000316848 THUMPD2Q9BTF0 503 aaKnown RBP21.28■■□□□ 1
MINDY2-201ENST00000316848 LRP2BPQ9P2M1 347 aa21.28■■□□□ 1
MINDY2-201ENST00000316848 SSH1Q8WYL5 1049 aa21.28■■□□□ 1
MINDY2-201ENST00000316848 RARSP54136 660 aaKnown RBP21.27■■□□□ 1
MINDY2-201ENST00000316848 TAF7Q15545 349 aaPredicted RBP21.27■■□□□ 1
MINDY2-201ENST00000316848 ABCA10Q8WWZ4 1543 aa21.27■■□□□ 1
MINDY2-201ENST00000316848 MCM10Q7L590 875 aa21.27■■□□□ 1
MINDY2-201ENST00000316848 RAI14Q9P0K7 980 aa21.27■■□□□ 1
MINDY2-201ENST00000316848 MCM4P33991 863 aa21.27■■□□□ 1
MINDY2-201ENST00000316848 TMEM132AQ24JP5 1023 aa21.27■■□□□ 1
MINDY2-201ENST00000316848 WASF1Q92558 559 aa21.27■□□□□ 0.99
MINDY2-201ENST00000316848 IDH1O75874 414 aaKnown RBP21.26■□□□□ 0.99
MINDY2-201ENST00000316848 MX1P20591 662 aa21.26■□□□□ 0.99
MINDY2-201ENST00000316848 SF3B2Q13435 895 aaKnown RBP21.26■□□□□ 0.99
MINDY2-201ENST00000316848 STK11IPQ8N1F8 1099 aa21.26■□□□□ 0.99
MINDY2-201ENST00000316848 SPC24Q8NBT2 197 aa21.26■□□□□ 0.99
MINDY2-201ENST00000316848 IMMTQ16891 758 aaKnown RBP21.26■□□□□ 0.99
MINDY2-201ENST00000316848 CEP57L1Q8IYX8 460 aa21.26■□□□□ 0.99
MINDY2-201ENST00000316848 AKAP2Q9Y2D5 859 aa21.26■□□□□ 0.99
MINDY2-201ENST00000316848 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.26■□□□□ 0.998e-8■■■■■ 44.9
MINDY2-201ENST00000316848 IQGAP2Q13576 1575 aa21.25■□□□□ 0.99
MINDY2-201ENST00000316848 CD109Q6YHK3 1445 aa21.25■□□□□ 0.99
MINDY2-201ENST00000316848 WWC2Q6AWC2 1192 aa21.25■□□□□ 0.99
MINDY2-201ENST00000316848 BMP2KQ9NSY1 1161 aaPredicted RBP21.25■□□□□ 0.99
MINDY2-201ENST00000316848 CBFA2T2O43439 604 aa21.24■□□□□ 0.99
MINDY2-201ENST00000316848 AIDAQ96BJ3 306 aa21.24■□□□□ 0.99
MINDY2-201ENST00000316848 MIS18AQ9NYP9 233 aa21.24■□□□□ 0.99
MINDY2-201ENST00000316848 NUP62CLQ9H1M0 184 aa21.24■□□□□ 0.99
MINDY2-201ENST00000316848 U3KPZ7 1027 aaPredicted RBP21.24■□□□□ 0.99
MINDY2-201ENST00000316848 NUTM1Q86Y26 1132 aa21.24■□□□□ 0.99
MINDY2-201ENST00000316848 TXLNBQ8N3L3 684 aa21.24■□□□□ 0.99
MINDY2-201ENST00000316848 GRPEL1Q9HAV7 217 aa21.24■□□□□ 0.99
MINDY2-201ENST00000316848 DCTN1Q14203 1278 aa21.23■□□□□ 0.99
MINDY2-201ENST00000316848 METTL24Q5JXM2 366 aa21.23■□□□□ 0.99
MINDY2-201ENST00000316848 ABCC5O15440 1437 aa21.22■□□□□ 0.99
MINDY2-201ENST00000316848 NOM1Q5C9Z4 860 aaKnown RBP21.22■□□□□ 0.99
MINDY2-201ENST00000316848 ZHX3Q9H4I2 956 aa21.22■□□□□ 0.99
MINDY2-201ENST00000316848 CAMSAP2Q08AD1 1489 aa21.22■□□□□ 0.99
MINDY2-201ENST00000316848 BCL11BQ9C0K0 894 aaPredicted RBP21.22■□□□□ 0.99
MINDY2-201ENST00000316848 PTCD1O75127 700 aaKnown RBP21.22■□□□□ 0.99
MINDY2-201ENST00000316848 NME9Q86XW9 330 aa21.22■□□□□ 0.99
MINDY2-201ENST00000316848 ZNF652Q9Y2D9 606 aa21.22■□□□□ 0.99
MINDY2-201ENST00000316848 CASTP20810 708 aaKnown RBP21.21■□□□□ 0.99
MINDY2-201ENST00000316848 CCDC85AQ96PX6 553 aaPredicted RBP21.21■□□□□ 0.99
MINDY2-201ENST00000316848 DEF6Q9H4E7 631 aa21.21■□□□□ 0.99
MINDY2-201ENST00000316848 RBM5P52756 815 aaKnown RBP eCLIP21.21■□□□□ 0.99
MINDY2-201ENST00000316848 ABCF2Q9UG63 623 aa21.21■□□□□ 0.99
MINDY2-201ENST00000316848 PHF8Q9UPP1 1060 aa21.21■□□□□ 0.99
MINDY2-201ENST00000316848 PDCL3Q9H2J4 239 aa21.2■□□□□ 0.98
MINDY2-201ENST00000316848 WASLO00401 505 aaPredicted RBP21.2■□□□□ 0.98
MINDY2-201ENST00000316848 IFIT1P09914 478 aaKnown RBP21.2■□□□□ 0.98
MINDY2-201ENST00000316848 ZSCAN29Q8IWY8 852 aaPredicted RBP21.2■□□□□ 0.98
MINDY2-201ENST00000316848 NKTRP30414 1462 aaKnown RBP21.19■□□□□ 0.98
MINDY2-201ENST00000316848 TMOD3Q9NYL9 352 aa21.19■□□□□ 0.98
MINDY2-201ENST00000316848 BRPF3Q9ULD4 1205 aa21.19■□□□□ 0.98
MINDY2-201ENST00000316848 ZNF287Q9HBT7 754 aa21.19■□□□□ 0.98
MINDY2-201ENST00000316848 UPF3BQ9BZI7 483 aaKnown RBP21.18■□□□□ 0.98
MINDY2-201ENST00000316848 TANGO6Q9C0B7 1094 aa21.18■□□□□ 0.98
MINDY2-201ENST00000316848 IDI1Q13907 227 aa21.18■□□□□ 0.98
MINDY2-201ENST00000316848 CCDC112Q8NEF3 446 aa21.18■□□□□ 0.98
MINDY2-201ENST00000316848 EMILIN1Q9Y6C2 1016 aa21.18■□□□□ 0.98
MINDY2-201ENST00000316848 ADGRL1O94910 1474 aa21.18■□□□□ 0.98
MINDY2-201ENST00000316848 C11orf95C9JLR9 678 aaPredicted RBP21.17■□□□□ 0.98
MINDY2-201ENST00000316848 DBF4Q9UBU7 674 aaPredicted RBP21.17■□□□□ 0.98
MINDY2-201ENST00000316848 PPP1R1BQ9UD71 204 aaPredicted RBP21.17■□□□□ 0.98
MINDY2-201ENST00000316848 ADGRF5Q8IZF2 1346 aa21.17■□□□□ 0.98
MINDY2-201ENST00000316848 DCAF8L1A6NGE4 600 aa21.17■□□□□ 0.98
MINDY2-201ENST00000316848 DNAAF4Q8WXU2 420 aa21.17■□□□□ 0.98
MINDY2-201ENST00000316848 SMTNL1A8MU46 457 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms