RNA–Protein interactions for RNA: ENST00000312423.2

SWSAP1-201, Transcript of SWIM-type zinc finger 7 associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SWSAP1, Length 1,684 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1-201ENST00000312423 HMOX1P09601 288 aa23.44■■□□□ 1.34
SWSAP1-201ENST00000312423 ZCRB1Q8TBF4 217 aaKnown RBP23.44■■□□□ 1.34
SWSAP1-201ENST00000312423 DDX54Q8TDD1 881 aaKnown RBP23.43■■□□□ 1.34
SWSAP1-201ENST00000312423 MARCH10Q8NA82 808 aaPredicted RBP23.41■■□□□ 1.34
SWSAP1-201ENST00000312423 SHANK3Q9BYB0 1731 aa23.4■■□□□ 1.34
SWSAP1-201ENST00000312423 KDRP35968 1356 aa23.4■■□□□ 1.34
SWSAP1-201ENST00000312423 PKD1L3Q7Z443 1732 aa23.39■■□□□ 1.34
SWSAP1-201ENST00000312423 U2AF1L5P0DN76 240 aaPredicted RBP23.39■■□□□ 1.34
SWSAP1-201ENST00000312423 U2AF1Q01081 240 aaKnown RBP eCLIP23.39■■□□□ 1.34
SWSAP1-201ENST00000312423 FAM196AQ6ZSG2 479 aa23.39■■□□□ 1.34
SWSAP1-201ENST00000312423 SPG7Q9UQ90 795 aa23.39■■□□□ 1.34
SWSAP1-201ENST00000312423 PCDH11XQ9BZA7 1347 aa23.37■■□□□ 1.33
SWSAP1-201ENST00000312423 PCDH11YQ9BZA8 1340 aa23.37■■□□□ 1.33
SWSAP1-201ENST00000312423 SOCS7O14512 581 aa23.36■■□□□ 1.33
SWSAP1-201ENST00000312423 EP400Q96L91 3159 aa23.35■■□□□ 1.33
SWSAP1-201ENST00000312423 PLEKHO1Q53GL0 409 aaPredicted RBP23.35■■□□□ 1.33
SWSAP1-201ENST00000312423 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.34■■□□□ 1.33
SWSAP1-201ENST00000312423 PLEKHG2Q9H7P9 1386 aa23.33■■□□□ 1.33
SWSAP1-201ENST00000312423 AMOTQ4VCS5 1084 aa23.33■■□□□ 1.33
SWSAP1-201ENST00000312423 UPF1Q92900 1129 aaKnown RBP eCLIP23.33■■□□□ 1.33
SWSAP1-201ENST00000312423 TRIM37O94972 964 aa23.32■■□□□ 1.32
SWSAP1-201ENST00000312423 PRKAR2BP31323 418 aa23.32■■□□□ 1.32
SWSAP1-201ENST00000312423 ZNF530Q6P9A1 599 aaPredicted RBP23.32■■□□□ 1.32
SWSAP1-201ENST00000312423 SBF2Q86WG5 1849 aa23.31■■□□□ 1.32
SWSAP1-201ENST00000312423 CYP27B1O15528 508 aa23.31■■□□□ 1.32
SWSAP1-201ENST00000312423 SF3B2Q13435 895 aaKnown RBP23.31■■□□□ 1.32
SWSAP1-201ENST00000312423 RSPH6AQ9H0K4 717 aa23.31■■□□□ 1.32
SWSAP1-201ENST00000312423 KAT6BQ8WYB5 2073 aa23.31■■□□□ 1.32
SWSAP1-201ENST00000312423 WDR43Q15061 677 aaKnown RBP eCLIP23.3■■□□□ 1.32
SWSAP1-201ENST00000312423 ACSBG1Q96GR2 724 aa23.3■■□□□ 1.32
SWSAP1-201ENST00000312423 IFNL2Q8IZJ0 200 aa23.29■■□□□ 1.32
SWSAP1-201ENST00000312423 DOT1LQ8TEK3 1739 aa23.29■■□□□ 1.32
SWSAP1-201ENST00000312423 BCL9O00512 1426 aa23.29■■□□□ 1.32
SWSAP1-201ENST00000312423 FCHSD2O94868 740 aa23.28■■□□□ 1.32
SWSAP1-201ENST00000312423 C1orf141Q5JVX7 400 aa23.28■■□□□ 1.32
SWSAP1-201ENST00000312423 DIEXFQ68CQ4 756 aaKnown RBP23.28■■□□□ 1.32
SWSAP1-201ENST00000312423 PHKG2P15735 406 aa23.28■■□□□ 1.32
SWSAP1-201ENST00000312423 MRS2Q9HD23 443 aa23.27■■□□□ 1.32
SWSAP1-201ENST00000312423 TNS1Q9HBL0 1735 aaKnown RBP23.26■■□□□ 1.31
SWSAP1-201ENST00000312423 NEFMP07197 916 aa23.26■■□□□ 1.31
SWSAP1-201ENST00000312423 CCDC184Q52MB2 194 aa23.26■■□□□ 1.31
SWSAP1-201ENST00000312423 CCDC125Q86Z20 511 aa23.26■■□□□ 1.31
SWSAP1-201ENST00000312423 SYTL4Q96C24 671 aaPredicted RBP23.26■■□□□ 1.31
SWSAP1-201ENST00000312423 NHSQ6T4R5 1651 aa23.26■■□□□ 1.31
SWSAP1-201ENST00000312423 MTHFSDQ2M296 383 aaKnown RBP23.25■■□□□ 1.31
SWSAP1-201ENST00000312423 PNNQ9H307 717 aaKnown RBP23.24■■□□□ 1.31
SWSAP1-201ENST00000312423 KCNQ2O43526 872 aa23.23■■□□□ 1.31
SWSAP1-201ENST00000312423 PHACTR3Q96KR7 559 aa23.23■■□□□ 1.31
SWSAP1-201ENST00000312423 BCL11BQ9C0K0 894 aaPredicted RBP23.23■■□□□ 1.31
SWSAP1-201ENST00000312423 HSP90AB1P08238 724 aaKnown RBP23.22■■□□□ 1.31
SWSAP1-201ENST00000312423 GAS2L2Q8NHY3 880 aa23.22■■□□□ 1.31
SWSAP1-201ENST00000312423 TOGARAM1Q9Y4F4 1720 aa23.22■■□□□ 1.31
SWSAP1-201ENST00000312423 MAPK8IP3Q9UPT6 1336 aa23.22■■□□□ 1.31
SWSAP1-201ENST00000312423 APBA3O96018 575 aa23.22■■□□□ 1.31
SWSAP1-201ENST00000312423 PRIM1P49642 420 aaKnown RBP23.22■■□□□ 1.31
SWSAP1-201ENST00000312423 NKX1-1Q15270 411 aaPredicted RBP23.22■■□□□ 1.31
SWSAP1-201ENST00000312423 PTF1AQ7RTS3 328 aa23.22■■□□□ 1.31
SWSAP1-201ENST00000312423 AKAP4Q5JQC9 854 aa23.21■■□□□ 1.31
SWSAP1-201ENST00000312423 BAG6P46379 1132 aa23.2■■□□□ 1.3
SWSAP1-201ENST00000312423 ADAMTS8Q9UP79 889 aa23.2■■□□□ 1.3
SWSAP1-201ENST00000312423 MPRIPQ6WCQ1 1025 aa23.19■■□□□ 1.3
SWSAP1-201ENST00000312423 DCAF5Q96JK2 942 aa23.19■■□□□ 1.3
SWSAP1-201ENST00000312423 BTAF1O14981 1849 aa23.19■■□□□ 1.3
SWSAP1-201ENST00000312423 DEFB132Q7Z7B7 95 aa23.19■■□□□ 1.3
SWSAP1-201ENST00000312423 ITGB4P16144 1822 aa23.18■■□□□ 1.3
SWSAP1-201ENST00000312423 CCDC146Q8IYE0 955 aa23.18■■□□□ 1.3
SWSAP1-201ENST00000312423 PLEKHF1Q96S99 279 aa23.18■■□□□ 1.3
SWSAP1-201ENST00000312423 MAP3K5Q99683 1374 aa23.17■■□□□ 1.3
SWSAP1-201ENST00000312423 KDM6AO15550 1401 aaPredicted RBP23.17■■□□□ 1.3
SWSAP1-201ENST00000312423 VIRMAQ69YN4 1812 aaKnown RBP23.16■■□□□ 1.3
SWSAP1-201ENST00000312423 SCN11AQ9UI33 1791 aa23.16■■□□□ 1.3
SWSAP1-201ENST00000312423 GNAT3A8MTJ3 354 aa23.16■■□□□ 1.3
SWSAP1-201ENST00000312423 EN1Q05925 392 aaPredicted RBP23.16■■□□□ 1.3
SWSAP1-201ENST00000312423 TMOD3Q9NYL9 352 aa23.15■■□□□ 1.3
SWSAP1-201ENST00000312423 CABP4P57796 275 aa23.13■■□□□ 1.29
SWSAP1-201ENST00000312423 ERVV-2B6SEH9 535 aa23.13■■□□□ 1.29
SWSAP1-201ENST00000312423 PNISRQ8TF01 805 aaKnown RBP23.13■■□□□ 1.29
SWSAP1-201ENST00000312423 RUNDC1Q96C34 613 aa23.13■■□□□ 1.29
SWSAP1-201ENST00000312423 LGR6Q9HBX8 967 aa23.13■■□□□ 1.29
SWSAP1-201ENST00000312423 RNMTO43148 476 aaKnown RBP23.12■■□□□ 1.29
SWSAP1-201ENST00000312423 RTF1Q92541 710 aaKnown RBP23.12■■□□□ 1.29
SWSAP1-201ENST00000312423 DLG5Q8TDM6 1919 aa23.12■■□□□ 1.29
SWSAP1-201ENST00000312423 NFE2L2Q16236 605 aa23.11■■□□□ 1.29
SWSAP1-201ENST00000312423 EZH2Q15910 746 aaKnown RBP23.1■■□□□ 1.29
SWSAP1-201ENST00000312423 PIGBQ92521 554 aa23.1■■□□□ 1.29
SWSAP1-201ENST00000312423 FAM9BQ8IZU0 186 aa23.09■■□□□ 1.29
SWSAP1-201ENST00000312423 RGPD3A6NKT7 1758 aaPredicted RBP23.09■■□□□ 1.29
SWSAP1-201ENST00000312423 RGPD4Q7Z3J3 1758 aa23.09■■□□□ 1.29
SWSAP1-201ENST00000312423 PLSCR1O15162 318 aa23.09■■□□□ 1.29
SWSAP1-201ENST00000312423 MIER1Q8N108 512 aa23.09■■□□□ 1.29
SWSAP1-201ENST00000312423 ADAMTS7Q9UKP4 1686 aa23.08■■□□□ 1.29
SWSAP1-201ENST00000312423 NFATC2IPQ8NCF5 419 aa23.08■■□□□ 1.29
SWSAP1-201ENST00000312423 CAMKK2Q96RR4 588 aa23.08■■□□□ 1.29
SWSAP1-201ENST00000312423 NEUROD2Q15784 382 aa23.07■■□□□ 1.28
SWSAP1-201ENST00000312423 RRP7AQ9Y3A4 280 aaKnown RBP23.07■■□□□ 1.28
SWSAP1-201ENST00000312423 CCER2I3L3R5 266 aa23.06■■□□□ 1.28
SWSAP1-201ENST00000312423 TEFQ10587 303 aa23.06■■□□□ 1.28
SWSAP1-201ENST00000312423 MCM10Q7L590 875 aa23.06■■□□□ 1.28
SWSAP1-201ENST00000312423 IL17REQ8NFR9 667 aa23.06■■□□□ 1.28
SWSAP1-201ENST00000312423 SLC52A2Q9HAB3 445 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms