RNA–Protein interactions for RNA: ENST00000312123.13

GAPVD1-203, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GAPVD1, Length 4,320 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-203ENST00000312123 SPATA32Q96LK8 384 aa8.4□□□□□ -1.06
GAPVD1-203ENST00000312123 LRRFIP2Q9Y608 721 aaKnown RBP8.4□□□□□ -1.06
GAPVD1-203ENST00000312123 PPFIA3O75145 1194 aa8.4□□□□□ -1.06
GAPVD1-203ENST00000312123 CCDC158Q5M9N0 1113 aa8.4□□□□□ -1.06
GAPVD1-203ENST00000312123 CCDC8Q9H0W5 538 aaPredicted RBP8.4□□□□□ -1.06
GAPVD1-203ENST00000312123 TTC39AQ5SRH9 613 aa8.4□□□□□ -1.06
GAPVD1-203ENST00000312123 PRDM11Q9NQV5 511 aa8.4□□□□□ -1.06
GAPVD1-203ENST00000312123 CEP126Q9P2H0 1117 aa8.4□□□□□ -1.06
GAPVD1-203ENST00000312123 LAMC3Q9Y6N6 1575 aa8.4□□□□□ -1.07
GAPVD1-203ENST00000312123 FOXO3O43524 673 aa8.4□□□□□ -1.07
GAPVD1-203ENST00000312123 LETM1O95202 739 aaPredicted RBP8.4□□□□□ -1.07
GAPVD1-203ENST00000312123 SART3Q15020 963 aaKnown RBP8.4□□□□□ -1.07
GAPVD1-203ENST00000312123 MPRIPQ6WCQ1 1025 aa8.4□□□□□ -1.07
GAPVD1-203ENST00000312123 SPG7Q9UQ90 795 aa8.4□□□□□ -1.07
GAPVD1-203ENST00000312123 MAPKBP1O60336 1514 aa8.39□□□□□ -1.07
GAPVD1-203ENST00000312123 DNMBPQ6XZF7 1577 aa8.39□□□□□ -1.07
GAPVD1-203ENST00000312123 CCDC57Q2TAC2 916 aa8.39□□□□□ -1.07
GAPVD1-203ENST00000312123 ALDH1L2Q3SY69 923 aa8.39□□□□□ -1.07
GAPVD1-203ENST00000312123 CCDC70Q6NSX1 233 aa8.39□□□□□ -1.07
GAPVD1-203ENST00000312123 KIF1BPQ96EK5 621 aa8.39□□□□□ -1.07
GAPVD1-203ENST00000312123 TRIM34Q9BYJ4 488 aa8.39□□□□□ -1.07
GAPVD1-203ENST00000312123 NUP133Q8WUM0 1156 aa8.39□□□□□ -1.07
GAPVD1-203ENST00000312123 SERPINC1P01008 464 aa8.39□□□□□ -1.07
GAPVD1-203ENST00000312123 RLBP1P12271 317 aa8.39□□□□□ -1.07
GAPVD1-203ENST00000312123 CEBPAP49715 358 aaPredicted RBP8.39□□□□□ -1.07
GAPVD1-203ENST00000312123 HMGN5P82970 282 aaKnown RBP8.39□□□□□ -1.07
GAPVD1-203ENST00000312123 ZNF396Q96N95 335 aaPredicted RBP8.39□□□□□ -1.07
GAPVD1-203ENST00000312123 TBC1D32Q96NH3 1257 aa8.39□□□□□ -1.07
GAPVD1-203ENST00000312123 NUP62CLQ9H1M0 184 aa8.39□□□□□ -1.07
GAPVD1-203ENST00000312123 GUCY1B3Q02153 619 aa8.38□□□□□ -1.07
GAPVD1-203ENST00000312123 AEBP1Q8IUX7 1158 aa8.38□□□□□ -1.07
GAPVD1-203ENST00000312123 ARGLU1Q9NWB6 273 aaPredicted RBP8.38□□□□□ -1.07
GAPVD1-203ENST00000312123 UQCRHLA0A096LP55 91 aa8.38□□□□□ -1.07
GAPVD1-203ENST00000312123 IDH1O75874 414 aaKnown RBP8.38□□□□□ -1.07
GAPVD1-203ENST00000312123 GLRX3O76003 335 aaKnown RBP8.38□□□□□ -1.07
GAPVD1-203ENST00000312123 UQCRHP07919 91 aa8.38□□□□□ -1.07
GAPVD1-203ENST00000312123 XBP1P17861 261 aa8.38□□□□□ -1.07
GAPVD1-203ENST00000312123 ANKRD1Q15327 319 aa8.38□□□□□ -1.07
GAPVD1-203ENST00000312123 ZSCAN30Q86W11 494 aa8.38□□□□□ -1.07
GAPVD1-203ENST00000312123 PIBF1Q8WXW3 757 aa8.38□□□□□ -1.07
GAPVD1-203ENST00000312123 MBIPQ9NS73 344 aa8.38□□□□□ -1.07
GAPVD1-203ENST00000312123 TFIP11Q9UBB9 837 aaKnown RBP8.38□□□□□ -1.07
GAPVD1-203ENST00000312123 IQGAP2Q13576 1575 aa8.38□□□□□ -1.07
GAPVD1-203ENST00000312123 PATL2C9JE40 543 aaKnown RBP8.38□□□□□ -1.07
GAPVD1-203ENST00000312123 RAB11FIP3O75154 756 aa8.38□□□□□ -1.07
GAPVD1-203ENST00000312123 OFD1O75665 1012 aa8.38□□□□□ -1.07
GAPVD1-203ENST00000312123 SKIDA1Q1XH10 827 aa8.38□□□□□ -1.07
GAPVD1-203ENST00000312123 KIF6Q6ZMV9 814 aa8.38□□□□□ -1.07
GAPVD1-203ENST00000312123 MAP3K1Q13233 1512 aa8.38□□□□□ -1.07
GAPVD1-203ENST00000312123 FLIIQ13045 1269 aa8.38□□□□□ -1.07
GAPVD1-203ENST00000312123 TEX35Q5T0J7 233 aa8.38□□□□□ -1.07
GAPVD1-203ENST00000312123 MEIS3Q99687 375 aa8.37□□□□□ -1.07
GAPVD1-203ENST00000312123 BRMS1Q9HCU9 246 aa8.37□□□□□ -1.07
GAPVD1-203ENST00000312123 SEC24BO95487 1268 aa8.37□□□□□ -1.07
GAPVD1-203ENST00000312123 NOS1P29475 1434 aa8.37□□□□□ -1.07
GAPVD1-203ENST00000312123 CCDC82Q8N4S0 544 aa8.37□□□□□ -1.07
GAPVD1-203ENST00000312123 JARID2Q92833 1246 aaPredicted RBP8.37□□□□□ -1.07
GAPVD1-203ENST00000312123 MAP7D2Q96T17 732 aa8.37□□□□□ -1.07
GAPVD1-203ENST00000312123 RBM27Q9P2N5 1060 aaKnown RBP8.37□□□□□ -1.07
GAPVD1-203ENST00000312123 USP25Q9UHP3 1055 aa8.37□□□□□ -1.07
GAPVD1-203ENST00000312123 WASLO00401 505 aaPredicted RBP8.37□□□□□ -1.07
GAPVD1-203ENST00000312123 HSP90AB2PQ58FF8 381 aa8.37□□□□□ -1.07
GAPVD1-203ENST00000312123 CKAP2LQ8IYA6 745 aa8.37□□□□□ -1.07
GAPVD1-203ENST00000312123 MPHOSPH8Q99549 860 aa8.37□□□□□ -1.07
GAPVD1-203ENST00000312123 PANK2Q9BZ23 570 aa8.37□□□□□ -1.07
GAPVD1-203ENST00000312123 TCEAL9Q9UHQ7 104 aa8.37□□□□□ -1.07
GAPVD1-203ENST00000312123 HSP90B2PQ58FF3 399 aa8.36□□□□□ -1.07
GAPVD1-203ENST00000312123 BMP2KLQ5H9B9 411 aa8.36□□□□□ -1.07
GAPVD1-203ENST00000312123 CCDC112Q8NEF3 446 aa8.36□□□□□ -1.07
GAPVD1-203ENST00000312123 ABCC11Q96J66 1382 aa8.36□□□□□ -1.07
GAPVD1-203ENST00000312123 IKQ13123 557 aaPredicted RBP8.36□□□□□ -1.07
GAPVD1-203ENST00000312123 C16orf71Q8IYS4 520 aaPredicted RBP8.36□□□□□ -1.07
GAPVD1-203ENST00000312123 TESK2Q96S53 571 aa8.36□□□□□ -1.07
GAPVD1-203ENST00000312123 C14orf93Q9H972 538 aaKnown RBP8.36□□□□□ -1.07
GAPVD1-203ENST00000312123 PPP6R1Q9UPN7 881 aa8.36□□□□□ -1.07
GAPVD1-203ENST00000312123 BAG4O95429 457 aaKnown RBP8.36□□□□□ -1.07
GAPVD1-203ENST00000312123 ZSCAN31Q96LW9 406 aaPredicted RBP8.36□□□□□ -1.07
GAPVD1-203ENST00000312123 TCEANC2Q96MN5 208 aa8.36□□□□□ -1.07
GAPVD1-203ENST00000312123 ZRANB1Q9UGI0 708 aa8.36□□□□□ -1.07
GAPVD1-203ENST00000312123 PI4KAP2A4QPH2 592 aa8.35□□□□□ -1.07
GAPVD1-203ENST00000312123 ATP2B2Q01814 1243 aa8.35□□□□□ -1.07
GAPVD1-203ENST00000312123 MAP3K11Q16584 847 aa8.35□□□□□ -1.07
GAPVD1-203ENST00000312123 KRT24Q2M2I5 525 aa8.35□□□□□ -1.07
GAPVD1-203ENST00000312123 C8orf34Q49A92 452 aa8.35□□□□□ -1.07
GAPVD1-203ENST00000312123 PI4KAP1Q8N8J0 262 aa8.35□□□□□ -1.07
GAPVD1-203ENST00000312123 JMYQ8N9B5 988 aa8.35□□□□□ -1.07
GAPVD1-203ENST00000312123 MYD88Q99836 296 aa8.35□□□□□ -1.07
GAPVD1-203ENST00000312123 ABCF2Q9UG63 623 aa8.35□□□□□ -1.07
GAPVD1-203ENST00000312123 ANKLE2Q86XL3 938 aa8.35□□□□□ -1.07
GAPVD1-203ENST00000312123 TRIM22Q8IYM9 498 aa8.35□□□□□ -1.07
GAPVD1-203ENST00000312123 DNAAF4Q8WXU2 420 aa8.35□□□□□ -1.07
GAPVD1-203ENST00000312123 AMOTL2Q9Y2J4 779 aa8.35□□□□□ -1.07
GAPVD1-203ENST00000312123 KAT6BQ8WYB5 2073 aa8.35□□□□□ -1.07
GAPVD1-203ENST00000312123 C8orf58Q8NAV2 365 aa8.35□□□□□ -1.07
GAPVD1-203ENST00000312123 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.35□□□□□ -1.071e-6■■■■□ 20.7
GAPVD1-203ENST00000312123 ZNF608Q9ULD9 1512 aaPredicted RBP8.35□□□□□ -1.07
GAPVD1-203ENST00000312123 CAGE1Q8TC20 777 aa8.35□□□□□ -1.07
GAPVD1-203ENST00000312123 CFAP45Q9UL16 551 aa8.35□□□□□ -1.07
GAPVD1-203ENST00000312123 PLEKHH1Q9ULM0 1364 aa8.35□□□□□ -1.07
GAPVD1-203ENST00000312123 PPP1R42Q7Z4L9 355 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms