RNA–Protein interactions for RNA: ENST00000310015.10

SP3-201, Transcript of Sp3 transcription factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SP3, Length 6,359 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP3-201ENST00000310015 CFAP100Q494V2 611 aa13.59□□□□□ -0.23
SP3-201ENST00000310015 CPLX3Q8WVH0 158 aa13.59□□□□□ -0.23
SP3-201ENST00000310015 NUP62CLQ9H1M0 184 aa13.59□□□□□ -0.23
SP3-201ENST00000310015 SURF6O75683 361 aaKnown RBP13.58□□□□□ -0.23
SP3-201ENST00000310015 CHMP4BP1P59074 171 aa13.58□□□□□ -0.24
SP3-201ENST00000310015 MVPQ14764 893 aaKnown RBP13.58□□□□□ -0.24
SP3-201ENST00000310015 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.58□□□□□ -0.24
SP3-201ENST00000310015 NOB1Q9ULX3 412 aaKnown RBP13.58□□□□□ -0.24
SP3-201ENST00000310015 VGFO15240 615 aaPredicted RBP13.57□□□□□ -0.24
SP3-201ENST00000310015 MNAT1P51948 309 aa13.57□□□□□ -0.24
SP3-201ENST00000310015 PTPN14Q15678 1187 aa13.57□□□□□ -0.24
SP3-201ENST00000310015 LARP1BQ659C4 914 aaKnown RBP13.57□□□□□ -0.24
SP3-201ENST00000310015 CTR9Q6PD62 1173 aa13.57□□□□□ -0.24
SP3-201ENST00000310015 CALCOCO1Q9P1Z2 691 aa13.57□□□□□ -0.24
SP3-201ENST00000310015 MACROD2A1Z1Q3 448 aa13.57□□□□□ -0.24
SP3-201ENST00000310015 TSR2Q969E8 191 aaKnown RBP13.57□□□□□ -0.24
SP3-201ENST00000310015 TBC1D2BQ9UPU7 963 aa13.57□□□□□ -0.24
SP3-201ENST00000310015 GSTTP1A0A1W2PQM5 241 aa13.57□□□□□ -0.24
SP3-201ENST00000310015 KRT85P78386 507 aa13.57□□□□□ -0.24
SP3-201ENST00000310015 CHD1LQ86WJ1 897 aa13.57□□□□□ -0.24
SP3-201ENST00000310015 KLHL10Q6JEL2 608 aa13.57□□□□□ -0.24
SP3-201ENST00000310015 MAATS1Q7Z4T9 603 aa13.57□□□□□ -0.24
SP3-201ENST00000310015 CEP57L1Q8IYX8 460 aa13.57□□□□□ -0.24
SP3-201ENST00000310015 C16orf45Q96MC5 204 aaPredicted RBP13.57□□□□□ -0.24
SP3-201ENST00000310015 CABP2Q9NPB3 220 aa13.57□□□□□ -0.24
SP3-201ENST00000310015 CYP46A1Q9Y6A2 500 aa13.56□□□□□ -0.24
SP3-201ENST00000310015 SPATA24Q86W54 205 aa13.56□□□□□ -0.24
SP3-201ENST00000310015 PPM1EQ8WY54 764 aa13.56□□□□□ -0.24
SP3-201ENST00000310015 MICALCLQ6ZW33 695 aa13.56□□□□□ -0.24
SP3-201ENST00000310015 LUZP1Q86V48 1076 aa13.56□□□□□ -0.24
SP3-201ENST00000310015 WDR97A6NE52 1622 aa13.56□□□□□ -0.24
SP3-201ENST00000310015 SKAP1Q86WV1 359 aa13.56□□□□□ -0.24
SP3-201ENST00000310015 STAC3Q96MF2 364 aa13.56□□□□□ -0.24
SP3-201ENST00000310015 ZSWIM4Q9H7M6 989 aa13.55□□□□□ -0.24
SP3-201ENST00000310015 CLCN1P35523 988 aa13.55□□□□□ -0.24
SP3-201ENST00000310015 MTHFSP49914 203 aa13.55□□□□□ -0.24
SP3-201ENST00000310015 BMS1Q14692 1282 aaKnown RBP13.55□□□□□ -0.24
SP3-201ENST00000310015 GNAI3P08754 354 aa13.55□□□□□ -0.24
SP3-201ENST00000310015 TXLNBQ8N3L3 684 aa13.55□□□□□ -0.24
SP3-201ENST00000310015 PAIP2Q9BPZ3 127 aaKnown RBP13.55□□□□□ -0.24
SP3-201ENST00000310015 KIF4BQ2VIQ3 1234 aa13.55□□□□□ -0.24
SP3-201ENST00000310015 PDRG1Q9NUG6 133 aa13.55□□□□□ -0.24
SP3-201ENST00000310015 DYNC1I1O14576 645 aa13.54□□□□□ -0.24
SP3-201ENST00000310015 MCM5P33992 734 aa13.54□□□□□ -0.24
SP3-201ENST00000310015 USP5P45974 858 aa13.54□□□□□ -0.24
SP3-201ENST00000310015 SPA17Q15506 151 aa13.54□□□□□ -0.24
SP3-201ENST00000310015 CCDC96Q2M329 555 aa13.54□□□□□ -0.24
SP3-201ENST00000310015 DNAAF4Q8WXU2 420 aa13.54□□□□□ -0.24
SP3-201ENST00000310015 ZNF397Q8NF99 534 aaPredicted RBP13.54□□□□□ -0.24
SP3-201ENST00000310015 GCOM1H8Y6P7 765 aaPredicted RBP13.53□□□□□ -0.24
SP3-201ENST00000310015 KIF5CO60282 957 aa13.53□□□□□ -0.24
SP3-201ENST00000310015 MYZAPP0CAP1 466 aa13.53□□□□□ -0.24
SP3-201ENST00000310015 CLIP2Q9UDT6 1046 aa13.53□□□□□ -0.24
SP3-201ENST00000310015 KIF2AO00139 706 aaPredicted RBP13.53□□□□□ -0.24
SP3-201ENST00000310015 SLC3A2P08195 630 aaKnown RBP13.53□□□□□ -0.24
SP3-201ENST00000310015 UBA5Q9GZZ9 404 aa13.53□□□□□ -0.24
SP3-201ENST00000310015 ATF7IPQ6VMQ6 1270 aa13.53□□□□□ -0.24
SP3-201ENST00000310015 TBC1D2Q9BYX2 928 aa13.53□□□□□ -0.24
SP3-201ENST00000310015 CNNM1Q9NRU3 951 aa13.53□□□□□ -0.24
SP3-201ENST00000310015 WDR63Q8IWG1 891 aa13.53□□□□□ -0.24
SP3-201ENST00000310015 MPHOSPH10O00566 681 aaKnown RBP13.53□□□□□ -0.24
SP3-201ENST00000310015 IRX3P78415 501 aaPredicted RBP13.53□□□□□ -0.24
SP3-201ENST00000310015 HIP1O00291 1037 aa13.52□□□□□ -0.24
SP3-201ENST00000310015 CCDC175P0C221 793 aa13.52□□□□□ -0.24
SP3-201ENST00000310015 CWC27Q6UX04 472 aaKnown RBP13.52□□□□□ -0.24
SP3-201ENST00000310015 COMMD10Q9Y6G5 202 aa13.52□□□□□ -0.24
SP3-201ENST00000310015 RBM5P52756 815 aaKnown RBP eCLIP13.52□□□□□ -0.24
SP3-201ENST00000310015 JAKMIP1Q96N16 626 aaKnown RBP13.52□□□□□ -0.24
SP3-201ENST00000310015 RSPH14Q9UHP6 348 aa13.52□□□□□ -0.24
SP3-201ENST00000310015 ZNF76P36508 570 aa13.52□□□□□ -0.25
SP3-201ENST00000310015 NBPF8Q3BBV2 869 aa13.52□□□□□ -0.25
SP3-201ENST00000310015 DAAM2Q86T65 1068 aa13.52□□□□□ -0.25
SP3-201ENST00000310015 PPP1R1BQ9UD71 204 aaPredicted RBP13.52□□□□□ -0.25
SP3-201ENST00000310015 SMTNL1A8MU46 457 aa13.52□□□□□ -0.25
SP3-201ENST00000310015 TNPO1Q92973 898 aaKnown RBP13.52□□□□□ -0.25
SP3-201ENST00000310015 HLTFQ14527 1009 aaKnown RBP eCLIP13.51□□□□□ -0.25
SP3-201ENST00000310015 SOGA3Q5TF21 947 aa13.51□□□□□ -0.25
SP3-201ENST00000310015 DDX54Q8TDD1 881 aaKnown RBP13.51□□□□□ -0.25
SP3-201ENST00000310015 SMARCC1Q92922 1105 aaPredicted RBP13.51□□□□□ -0.25
SP3-201ENST00000310015 NUP88Q99567 741 aaPredicted RBP13.51□□□□□ -0.25
SP3-201ENST00000310015 RNF216Q9NWF9 866 aaPredicted RBP13.51□□□□□ -0.25
SP3-201ENST00000310015 ANKRD1Q15327 319 aa13.51□□□□□ -0.25
SP3-201ENST00000310015 ISM2Q6H9L7 571 aa13.51□□□□□ -0.25
SP3-201ENST00000310015 LARP1Q6PKG0 1096 aaKnown RBP13.51□□□□□ -0.25
SP3-201ENST00000310015 JMYQ8N9B5 988 aa13.51□□□□□ -0.25
SP3-201ENST00000310015 GUCY1B3Q02153 619 aa13.51□□□□□ -0.25
SP3-201ENST00000310015 PSME1Q06323 249 aa13.51□□□□□ -0.25
SP3-201ENST00000310015 PRPF4BQ13523 1007 aaKnown RBP13.51□□□□□ -0.25
SP3-201ENST00000310015 MAP9Q49MG5 647 aa13.51□□□□□ -0.25
SP3-201ENST00000310015 MXRA7P84157 204 aa13.51□□□□□ -0.25
SP3-201ENST00000310015 TMEM132EQ6IEE7 984 aa13.51□□□□□ -0.25
SP3-201ENST00000310015 DRC1Q96MC2 740 aa13.51□□□□□ -0.25
SP3-201ENST00000310015 NAP1L3Q99457 506 aaPredicted RBP13.51□□□□□ -0.25
SP3-201ENST00000310015 LARP6Q9BRS8 491 aaKnown RBP13.51□□□□□ -0.25
SP3-201ENST00000310015 TWISTNBQ3B726 338 aaPredicted RBP13.5□□□□□ -0.25
SP3-201ENST00000310015 TIGD1Q96MW7 591 aa13.5□□□□□ -0.25
SP3-201ENST00000310015 MAP3K11Q16584 847 aa13.5□□□□□ -0.25
SP3-201ENST00000310015 CFAP57Q96MR6 1250 aa13.5□□□□□ -0.25
SP3-201ENST00000310015 SCLT1Q96NL6 688 aa13.5□□□□□ -0.25
SP3-201ENST00000310015 FKBP4Q02790 459 aaKnown RBP eCLIP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms