RNA–Protein interactions for RNA: ENST00000309534.10

CGGBP1-201, Transcript of CGG triplet repeat binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CGGBP1, Length 4,495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGGBP1-201ENST00000309534 LRRC7Q96NW7 1537 aa19.63■□□□□ 0.73
CGGBP1-201ENST00000309534 MAP3K5Q99683 1374 aa19.63■□□□□ 0.73
CGGBP1-201ENST00000309534 FAM83GA6ND36 823 aa19.62■□□□□ 0.73
CGGBP1-201ENST00000309534 C1orf167Q5SNV9 1468 aa19.62■□□□□ 0.73
CGGBP1-201ENST00000309534 AKAP12Q02952 1782 aa19.62■□□□□ 0.73
CGGBP1-201ENST00000309534 USHBP1Q8N6Y0 703 aa19.62■□□□□ 0.73
CGGBP1-201ENST00000309534 TTC5Q8N0Z6 440 aa19.61■□□□□ 0.73
CGGBP1-201ENST00000309534 MAP2P11137 1827 aaKnown RBP19.6■□□□□ 0.73
CGGBP1-201ENST00000309534 SLC4A10Q6U841 1118 aa19.6■□□□□ 0.73
CGGBP1-201ENST00000309534 AKAP4Q5JQC9 854 aa19.59■□□□□ 0.73
CGGBP1-201ENST00000309534 PTPRCP08575 1304 aa19.59■□□□□ 0.73
CGGBP1-201ENST00000309534 TRIM27P14373 513 aa19.59■□□□□ 0.73
CGGBP1-201ENST00000309534 SLAIN2Q9P270 581 aa19.59■□□□□ 0.73
CGGBP1-201ENST00000309534 FMN2Q9NZ56 1722 aa19.59■□□□□ 0.73
CGGBP1-201ENST00000309534 SHPRHQ149N8 1683 aa19.59■□□□□ 0.73
CGGBP1-201ENST00000309534 SSH2Q76I76 1423 aa19.58■□□□□ 0.73
CGGBP1-201ENST00000309534 VAMP4O75379 141 aa19.58■□□□□ 0.73
CGGBP1-201ENST00000309534 FKBP5Q13451 457 aaPredicted RBP19.58■□□□□ 0.73
CGGBP1-201ENST00000309534 TOM1L2Q6ZVM7 507 aa19.58■□□□□ 0.73
CGGBP1-201ENST00000309534 ARHGEF25Q86VW2 580 aa19.58■□□□□ 0.73
CGGBP1-201ENST00000309534 SLC4A2P04920 1241 aa19.58■□□□□ 0.72
CGGBP1-201ENST00000309534 BCL11AQ9H165 835 aa19.58■□□□□ 0.72
CGGBP1-201ENST00000309534 CHL1O00533 1208 aa19.57■□□□□ 0.72
CGGBP1-201ENST00000309534 CCT4P50991 539 aaKnown RBP19.57■□□□□ 0.72
CGGBP1-201ENST00000309534 KIAA0232Q92628 1395 aa19.57■□□□□ 0.72
CGGBP1-201ENST00000309534 CHD2O14647 1828 aaKnown RBP19.56■□□□□ 0.72
CGGBP1-201ENST00000309534 FAM161AQ3B820 660 aa19.56■□□□□ 0.72
CGGBP1-201ENST00000309534 HDGFL1Q5TGJ6 251 aa19.56■□□□□ 0.72
CGGBP1-201ENST00000309534 TMEM57Q8N5G2 664 aa19.56■□□□□ 0.72
CGGBP1-201ENST00000309534 DDX58O95786 925 aaKnown RBP19.56■□□□□ 0.72
CGGBP1-201ENST00000309534 BTBD11A6QL63 1104 aa19.56■□□□□ 0.72
CGGBP1-201ENST00000309534 EIF2S2P20042 333 aaKnown RBP19.55■□□□□ 0.72
CGGBP1-201ENST00000309534 MRPL50Q8N5N7 158 aaKnown RBP19.55■□□□□ 0.72
CGGBP1-201ENST00000309534 PDE4AP27815 886 aa19.55■□□□□ 0.72
CGGBP1-201ENST00000309534 TOPAZ1Q8N9V7 1692 aa19.55■□□□□ 0.72
CGGBP1-201ENST00000309534 CASC1Q6TDU7 716 aa19.54■□□□□ 0.72
CGGBP1-201ENST00000309534 GNAI3P08754 354 aa19.53■□□□□ 0.72
CGGBP1-201ENST00000309534 ZNF853P0CG23 659 aa19.53■□□□□ 0.72
CGGBP1-201ENST00000309534 C8orf58Q8NAV2 365 aa19.53■□□□□ 0.72
CGGBP1-201ENST00000309534 BRPF1P55201 1214 aaPredicted RBP19.52■□□□□ 0.72
CGGBP1-201ENST00000309534 GCC1Q96CN9 775 aa19.52■□□□□ 0.72
CGGBP1-201ENST00000309534 IFNL2Q8IZJ0 200 aa19.52■□□□□ 0.72
CGGBP1-201ENST00000309534 KIF1AQ12756 1690 aa19.51■□□□□ 0.71
CGGBP1-201ENST00000309534 NBPF6Q5VWK0 638 aa19.51■□□□□ 0.71
CGGBP1-201ENST00000309534 LRRC59Q96AG4 307 aaKnown RBP19.51■□□□□ 0.71
CGGBP1-201ENST00000309534 NBPF4Q96M43 638 aa19.51■□□□□ 0.71
CGGBP1-201ENST00000309534 MIS18AQ9NYP9 233 aa19.51■□□□□ 0.71
CGGBP1-201ENST00000309534 TNS3Q68CZ2 1445 aa19.5■□□□□ 0.71
CGGBP1-201ENST00000309534 KDRP35968 1356 aa19.5■□□□□ 0.71
CGGBP1-201ENST00000309534 STRN4Q9NRL3 753 aa19.5■□□□□ 0.71
CGGBP1-201ENST00000309534 BECN1Q14457 450 aa19.49■□□□□ 0.71
CGGBP1-201ENST00000309534 ZNF335Q9H4Z2 1342 aaPredicted RBP19.49■□□□□ 0.71
CGGBP1-201ENST00000309534 NECTIN2Q92692 538 aa19.49■□□□□ 0.71
CGGBP1-201ENST00000309534 A0A0G2JS52 829 aa19.49■□□□□ 0.71
CGGBP1-201ENST00000309534 CABP4P57796 275 aa19.49■□□□□ 0.71
CGGBP1-201ENST00000309534 NWD1Q149M9 1564 aa19.49■□□□□ 0.71
CGGBP1-201ENST00000309534 MPRIPQ6WCQ1 1025 aa19.48■□□□□ 0.71
CGGBP1-201ENST00000309534 SPATA31A3Q5VYP0 1347 aa19.48■□□□□ 0.71
CGGBP1-201ENST00000309534 NEXNQ0ZGT2 675 aa19.48■□□□□ 0.71
CGGBP1-201ENST00000309534 CHRNA2Q15822 529 aa19.48■□□□□ 0.71
CGGBP1-201ENST00000309534 TSPYL6Q8N831 410 aa19.48■□□□□ 0.71
CGGBP1-201ENST00000309534 USP19O94966 1318 aa19.48■□□□□ 0.71
CGGBP1-201ENST00000309534 HOXB7P09629 217 aa19.47■□□□□ 0.71
CGGBP1-201ENST00000309534 KDM4FA0A1W2PPD8 638 aa19.47■□□□□ 0.71
CGGBP1-201ENST00000309534 ANKRD45Q5TZF3 282 aa19.47■□□□□ 0.71
CGGBP1-201ENST00000309534 RPAP2Q8IXW5 612 aaPredicted RBP19.47■□□□□ 0.71
CGGBP1-201ENST00000309534 MST1RQ04912 1400 aa19.46■□□□□ 0.71
CGGBP1-201ENST00000309534 CABLES1Q8TDN4 633 aa19.46■□□□□ 0.71
CGGBP1-201ENST00000309534 OS9Q13438 667 aaPredicted RBP19.46■□□□□ 0.71
CGGBP1-201ENST00000309534 BRINP3Q76B58 766 aa19.46■□□□□ 0.71
CGGBP1-201ENST00000309534 PDZRN3Q9UPQ7 1066 aa19.46■□□□□ 0.71
CGGBP1-201ENST00000309534 LMTK3Q96Q04 1460 aa19.45■□□□□ 0.7
CGGBP1-201ENST00000309534 HDAC1Q13547 482 aaPredicted RBP19.45■□□□□ 0.7
CGGBP1-201ENST00000309534 CCDC9Q9Y3X0 531 aaKnown RBP19.45■□□□□ 0.7
CGGBP1-201ENST00000309534 RNMTO43148 476 aaKnown RBP19.45■□□□□ 0.7
CGGBP1-201ENST00000309534 TOM1O60784 492 aa19.45■□□□□ 0.7
CGGBP1-201ENST00000309534 RLBP1P12271 317 aa19.45■□□□□ 0.7
CGGBP1-201ENST00000309534 RTL5Q5HYW3 569 aaPredicted RBP19.44■□□□□ 0.7
CGGBP1-201ENST00000309534 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.44■□□□□ 0.72e-6■■□□□ 13.1
CGGBP1-201ENST00000309534 NALCNQ8IZF0 1738 aa19.44■□□□□ 0.7
CGGBP1-201ENST00000309534 GNAI2P04899 355 aa19.44■□□□□ 0.7
CGGBP1-201ENST00000309534 DDX17Q92841 729 aaKnown RBP19.43■□□□□ 0.7
CGGBP1-201ENST00000309534 UBTFL1P0CB47 393 aaPredicted RBP19.43■□□□□ 0.7
CGGBP1-201ENST00000309534 NRKQ7Z2Y5 1582 aa19.43■□□□□ 0.7
CGGBP1-201ENST00000309534 ERBB3P21860 1342 aa19.43■□□□□ 0.7
CGGBP1-201ENST00000309534 FLIIQ13045 1269 aa19.42■□□□□ 0.7
CGGBP1-201ENST00000309534 NCAPD2Q15021 1401 aa19.42■□□□□ 0.7
CGGBP1-201ENST00000309534 DBF4Q9UBU7 674 aaPredicted RBP19.42■□□□□ 0.7
CGGBP1-201ENST00000309534 AEBP2Q6ZN18 517 aaPredicted RBP19.42■□□□□ 0.7
CGGBP1-201ENST00000309534 SRCIN1Q9C0H9 1055 aa19.42■□□□□ 0.7
CGGBP1-201ENST00000309534 C9orf78Q9NZ63 289 aaPredicted RBP19.41■□□□□ 0.7
CGGBP1-201ENST00000309534 DCAF5Q96JK2 942 aa19.41■□□□□ 0.7
CGGBP1-201ENST00000309534 KDM2BQ8NHM5 1336 aa19.41■□□□□ 0.7
CGGBP1-201ENST00000309534 HSP90AB4PQ58FF6 505 aa19.4■□□□□ 0.7
CGGBP1-201ENST00000309534 ZCRB1Q8TBF4 217 aaKnown RBP19.4■□□□□ 0.7
CGGBP1-201ENST00000309534 BACH2Q9BYV9 841 aa19.4■□□□□ 0.7
CGGBP1-201ENST00000309534 HYPKQ9NX55 129 aa19.39■□□□□ 0.7
CGGBP1-201ENST00000309534 IL17REQ8NFR9 667 aa19.39■□□□□ 0.69
CGGBP1-201ENST00000309534 ZBTB40Q9NUA8 1239 aa19.39■□□□□ 0.69
CGGBP1-201ENST00000309534 RIC3Q7Z5B4 369 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms