RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 PANK1Q8TE04 598 aa13□□□□□ -0.33
APOBEC3F-201ENST00000308521 ELL2O00472 640 aaPredicted RBP12.99□□□□□ -0.33
APOBEC3F-201ENST00000308521 GCP02774 474 aa12.99□□□□□ -0.33
APOBEC3F-201ENST00000308521 RARSP54136 660 aaKnown RBP12.99□□□□□ -0.33
APOBEC3F-201ENST00000308521 CABLES1Q8TDN4 633 aa12.99□□□□□ -0.33
APOBEC3F-201ENST00000308521 TBC1D32Q96NH3 1257 aa12.99□□□□□ -0.33
APOBEC3F-201ENST00000308521 UPF2Q9HAU5 1272 aaKnown RBP12.99□□□□□ -0.33
APOBEC3F-201ENST00000308521 TNNQ9UQP3 1299 aa12.99□□□□□ -0.33
APOBEC3F-201ENST00000308521 MCM10Q7L590 875 aa12.98□□□□□ -0.33
APOBEC3F-201ENST00000308521 STRCQ7RTU9 1775 aa12.98□□□□□ -0.33
APOBEC3F-201ENST00000308521 ZC3H6P61129 1189 aaKnown RBP12.98□□□□□ -0.33
APOBEC3F-201ENST00000308521 CADPS2Q86UW7 1296 aa12.98□□□□□ -0.33
APOBEC3F-201ENST00000308521 MST1RQ04912 1400 aa12.97□□□□□ -0.33
APOBEC3F-201ENST00000308521 LRRC59Q96AG4 307 aaKnown RBP12.96□□□□□ -0.33
APOBEC3F-201ENST00000308521 MSH6P52701 1360 aa12.96□□□□□ -0.33
APOBEC3F-201ENST00000308521 MTHFSDQ2M296 383 aaKnown RBP12.96□□□□□ -0.33
APOBEC3F-201ENST00000308521 MARF1Q9Y4F3 1742 aaKnown RBP12.96□□□□□ -0.34
APOBEC3F-201ENST00000308521 RWDD1Q9H446 243 aaPredicted RBP12.96□□□□□ -0.34
APOBEC3F-201ENST00000308521 CLCN1P35523 988 aa12.95□□□□□ -0.34
APOBEC3F-201ENST00000308521 PDZRN3Q9UPQ7 1066 aa12.95□□□□□ -0.34
APOBEC3F-201ENST00000308521 PCDHB15Q9Y5E8 787 aa12.95□□□□□ -0.34
APOBEC3F-201ENST00000308521 NBPF6Q5VWK0 638 aa12.95□□□□□ -0.34
APOBEC3F-201ENST00000308521 IP6K1Q92551 441 aa12.95□□□□□ -0.34
APOBEC3F-201ENST00000308521 NBPF4Q96M43 638 aa12.95□□□□□ -0.34
APOBEC3F-201ENST00000308521 TBC1D2Q9BYX2 928 aa12.95□□□□□ -0.34
APOBEC3F-201ENST00000308521 MIS18AQ9NYP9 233 aa12.95□□□□□ -0.34
APOBEC3F-201ENST00000308521 AXIN2Q9Y2T1 843 aa12.95□□□□□ -0.34
APOBEC3F-201ENST00000308521 CALD1Q05682 793 aaKnown RBP12.94□□□□□ -0.34
APOBEC3F-201ENST00000308521 TSPYL6Q8N831 410 aa12.94□□□□□ -0.34
APOBEC3F-201ENST00000308521 KCNH5Q8NCM2 988 aa12.94□□□□□ -0.34
APOBEC3F-201ENST00000308521 SLKQ9H2G2 1235 aaPredicted RBP12.94□□□□□ -0.34
APOBEC3F-201ENST00000308521 MBIPQ9NS73 344 aa12.94□□□□□ -0.34
APOBEC3F-201ENST00000308521 IGSF1Q8N6C5 1336 aa12.93□□□□□ -0.34
APOBEC3F-201ENST00000308521 BRINP3Q76B58 766 aa12.93□□□□□ -0.34
APOBEC3F-201ENST00000308521 SSH1Q8WYL5 1049 aa12.93□□□□□ -0.34
APOBEC3F-201ENST00000308521 RLBP1P12271 317 aa12.93□□□□□ -0.34
APOBEC3F-201ENST00000308521 KRT24Q2M2I5 525 aa12.93□□□□□ -0.34
APOBEC3F-201ENST00000308521 ARHGEF25Q86VW2 580 aa12.93□□□□□ -0.34
APOBEC3F-201ENST00000308521 SMC4Q9NTJ3 1288 aa12.93□□□□□ -0.34
APOBEC3F-201ENST00000308521 SLAIN2Q9P270 581 aa12.93□□□□□ -0.34
APOBEC3F-201ENST00000308521 IL16Q14005 1332 aa12.92□□□□□ -0.34
APOBEC3F-201ENST00000308521 DLG5Q8TDM6 1919 aa12.92□□□□□ -0.34
APOBEC3F-201ENST00000308521 ARHGEF10O15013 1369 aa12.91□□□□□ -0.34
APOBEC3F-201ENST00000308521 CT47B1P0C2W7 299 aaPredicted RBP12.91□□□□□ -0.34
APOBEC3F-201ENST00000308521 FGD1P98174 961 aa12.91□□□□□ -0.34
APOBEC3F-201ENST00000308521 CHRNA2Q15822 529 aa12.91□□□□□ -0.34
APOBEC3F-201ENST00000308521 RRAGDQ9NQL2 400 aaPredicted RBP12.91□□□□□ -0.34
APOBEC3F-201ENST00000308521 FSD2A1L4K1 749 aa12.91□□□□□ -0.34
APOBEC3F-201ENST00000308521 GNAI1P63096 354 aa12.91□□□□□ -0.34
APOBEC3F-201ENST00000308521 C8orf58Q8NAV2 365 aa12.91□□□□□ -0.34
APOBEC3F-201ENST00000308521 NPHP3Q7Z494 1330 aa12.91□□□□□ -0.34
APOBEC3F-201ENST00000308521 LMOD3Q0VAK6 560 aa12.9□□□□□ -0.34
APOBEC3F-201ENST00000308521 CFAP44Q96MT7 982 aa12.9□□□□□ -0.34
APOBEC3F-201ENST00000308521 MVPQ14764 893 aaKnown RBP12.9□□□□□ -0.34
APOBEC3F-201ENST00000308521 IFT57Q9NWB7 429 aa12.9□□□□□ -0.34
APOBEC3F-201ENST00000308521 LTN1O94822 1766 aa12.9□□□□□ -0.34
APOBEC3F-201ENST00000308521 NFAT5O94916 1531 aa12.9□□□□□ -0.35
APOBEC3F-201ENST00000308521 ZNF853P0CG23 659 aa12.89□□□□□ -0.35
APOBEC3F-201ENST00000308521 MCM4P33991 863 aa12.89□□□□□ -0.35
APOBEC3F-201ENST00000308521 ANKRD24Q8TF21 1146 aa12.89□□□□□ -0.35
APOBEC3F-201ENST00000308521 RTF1Q92541 710 aaKnown RBP12.89□□□□□ -0.35
APOBEC3F-201ENST00000308521 NAP1L5Q96NT1 182 aaPredicted RBP12.89□□□□□ -0.35
APOBEC3F-201ENST00000308521 PDCL3Q9H2J4 239 aa12.89□□□□□ -0.35
APOBEC3F-201ENST00000308521 KDRP35968 1356 aa12.89□□□□□ -0.35
APOBEC3F-201ENST00000308521 XIRP1Q702N8 1843 aaKnown RBP12.89□□□□□ -0.35
APOBEC3F-201ENST00000308521 NOB1Q9ULX3 412 aaKnown RBP12.89□□□□□ -0.35
APOBEC3F-201ENST00000308521 RGPD1P0DJD0 1748 aa12.89□□□□□ -0.35
APOBEC3F-201ENST00000308521 RBM10P98175 930 aaKnown RBP12.88□□□□□ -0.35
APOBEC3F-201ENST00000308521 RNF216Q9NWF9 866 aaPredicted RBP12.88□□□□□ -0.35
APOBEC3F-201ENST00000308521 CHMP5Q9NZZ3 219 aa12.88□□□□□ -0.35
APOBEC3F-201ENST00000308521 DCCP43146 1447 aa12.88□□□□□ -0.35
APOBEC3F-201ENST00000308521 NCOA3Q9Y6Q9 1424 aa12.88□□□□□ -0.35
APOBEC3F-201ENST00000308521 GOLGA6L3A6NEY3 463 aa12.88□□□□□ -0.35
APOBEC3F-201ENST00000308521 VAMP4O75379 141 aa12.88□□□□□ -0.35
APOBEC3F-201ENST00000308521 TPM2P07951 284 aa12.87□□□□□ -0.35
APOBEC3F-201ENST00000308521 ZKSCAN2Q63HK3 967 aa12.87□□□□□ -0.35
APOBEC3F-201ENST00000308521 KIF24Q5T7B8 1368 aa12.87□□□□□ -0.35
APOBEC3F-201ENST00000308521 TWISTNBQ3B726 338 aaPredicted RBP12.87□□□□□ -0.35
APOBEC3F-201ENST00000308521 TRPM3Q9HCF6 1732 aaPredicted RBP12.87□□□□□ -0.35
APOBEC3F-201ENST00000308521 XRCC6P12956 609 aaKnown RBP eCLIP12.86□□□□□ -0.35
APOBEC3F-201ENST00000308521 HDAC1Q13547 482 aaPredicted RBP12.86□□□□□ -0.35
APOBEC3F-201ENST00000308521 GAS2L2Q8NHY3 880 aa12.86□□□□□ -0.35
APOBEC3F-201ENST00000308521 C22orf23Q9BZE7 217 aa12.86□□□□□ -0.35
APOBEC3F-201ENST00000308521 SPATA31A3Q5VYP0 1347 aa12.86□□□□□ -0.35
APOBEC3F-201ENST00000308521 TRIM27P14373 513 aa12.86□□□□□ -0.35
APOBEC3F-201ENST00000308521 DZIP1LQ8IYY4 767 aaKnown RBP12.86□□□□□ -0.35
APOBEC3F-201ENST00000308521 RTL1A6NKG5 1358 aa12.86□□□□□ -0.35
APOBEC3F-201ENST00000308521 FTSJ3Q8IY81 847 aaKnown RBP12.85□□□□□ -0.35
APOBEC3F-201ENST00000308521 GNAT3A8MTJ3 354 aa12.85□□□□□ -0.35
APOBEC3F-201ENST00000308521 IL17REQ8NFR9 667 aa12.85□□□□□ -0.35
APOBEC3F-201ENST00000308521 KIF1AQ12756 1690 aa12.85□□□□□ -0.35
APOBEC3F-201ENST00000308521 RGPD2P0DJD1 1756 aa12.85□□□□□ -0.35
APOBEC3F-201ENST00000308521 CHL1O00533 1208 aa12.85□□□□□ -0.35
APOBEC3F-201ENST00000308521 NLRP2Q9NX02 1062 aa12.85□□□□□ -0.35
APOBEC3F-201ENST00000308521 ISY1Q9ULR0 285 aaKnown RBP12.85□□□□□ -0.35
APOBEC3F-201ENST00000308521 MED1Q15648 1581 aaPredicted RBP12.84□□□□□ -0.35
APOBEC3F-201ENST00000308521 LGR6Q9HBX8 967 aa12.84□□□□□ -0.35
APOBEC3F-201ENST00000308521 TSPYL4Q9UJ04 414 aa12.84□□□□□ -0.35
APOBEC3F-201ENST00000308521 USP54Q70EL1 1684 aa12.84□□□□□ -0.35
APOBEC3F-201ENST00000308521 CSB-PGBD3P0DP91 1061 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms