RNA–Protein interactions for RNA: ENST00000308370.11

LTBP4-203, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LTBP4, Length 4,948 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-203ENST00000308370 COL17A1Q9UMD9 1497 aaPredicted RBP21.23■□□□□ 0.99
LTBP4-203ENST00000308370 CCDC39Q9UFE4 941 aa21.23■□□□□ 0.99
LTBP4-203ENST00000308370 FAM177BA6PVY3 158 aa21.23■□□□□ 0.99
LTBP4-203ENST00000308370 RDXP35241 583 aaKnown RBP21.23■□□□□ 0.99
LTBP4-203ENST00000308370 HIP1O00291 1037 aa21.23■□□□□ 0.99
LTBP4-203ENST00000308370 HMGN5P82970 282 aaKnown RBP21.23■□□□□ 0.99
LTBP4-203ENST00000308370 SKAP1Q86WV1 359 aa21.23■□□□□ 0.99
LTBP4-203ENST00000308370 DNAJC2Q99543 621 aaKnown RBP21.23■□□□□ 0.99
LTBP4-203ENST00000308370 SIL1Q9H173 461 aa21.23■□□□□ 0.99
LTBP4-203ENST00000308370 ZMYM3Q14202 1370 aa21.23■□□□□ 0.99
LTBP4-203ENST00000308370 MBD5Q9P267 1494 aa21.23■□□□□ 0.99
LTBP4-203ENST00000308370 NOL10Q9BSC4 688 aaKnown RBP21.23■□□□□ 0.99
LTBP4-203ENST00000308370 FAM83GA6ND36 823 aa21.22■□□□□ 0.99
LTBP4-203ENST00000308370 HSP90AB2PQ58FF8 381 aa21.22■□□□□ 0.99
LTBP4-203ENST00000308370 KRT28Q7Z3Y7 464 aa21.22■□□□□ 0.99
LTBP4-203ENST00000308370 TTC21AQ8NDW8 1320 aa21.22■□□□□ 0.99
LTBP4-203ENST00000308370 PSMA5P28066 241 aa21.22■□□□□ 0.99
LTBP4-203ENST00000308370 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.21■□□□□ 0.998e-7■■■□□ 18
LTBP4-203ENST00000308370 MBIPQ9NS73 344 aa21.21■□□□□ 0.99
LTBP4-203ENST00000308370 GCC2Q8IWJ2 1684 aa21.21■□□□□ 0.99
LTBP4-203ENST00000308370 MPRIPQ6WCQ1 1025 aa21.21■□□□□ 0.99
LTBP4-203ENST00000308370 RALYLQ86SE5 291 aaKnown RBP21.21■□□□□ 0.99
LTBP4-203ENST00000308370 IL1RAPL2Q9NP60 686 aa21.21■□□□□ 0.99
LTBP4-203ENST00000308370 HOOK1Q9UJC3 728 aaKnown RBP21.21■□□□□ 0.99
LTBP4-203ENST00000308370 EXOC6BQ9Y2D4 811 aa21.21■□□□□ 0.99
LTBP4-203ENST00000308370 NUTM2BA6NNL0 878 aaPredicted RBP21.2■□□□□ 0.98
LTBP4-203ENST00000308370 NUTM2EB1AL46 878 aaPredicted RBP21.2■□□□□ 0.98
LTBP4-203ENST00000308370 NUTM2AQ8IVF1 878 aaPredicted RBP21.2■□□□□ 0.98
LTBP4-203ENST00000308370 ERCC4Q92889 916 aaPredicted RBP21.2■□□□□ 0.98
LTBP4-203ENST00000308370 POLKQ9UBT6 870 aa21.2■□□□□ 0.98
LTBP4-203ENST00000308370 ARHGEF5Q12774 1597 aa21.2■□□□□ 0.98
LTBP4-203ENST00000308370 MCM2P49736 904 aa21.2■□□□□ 0.98
LTBP4-203ENST00000308370 PIK3C2GO75747 1445 aa21.19■□□□□ 0.98
LTBP4-203ENST00000308370 CCDC47Q96A33 483 aaKnown RBP21.19■□□□□ 0.98
LTBP4-203ENST00000308370 CCDC27Q2M243 656 aa21.19■□□□□ 0.98
LTBP4-203ENST00000308370 AMOTL1Q8IY63 956 aa21.19■□□□□ 0.98
LTBP4-203ENST00000308370 BICD2Q8TD16 824 aa21.19■□□□□ 0.98
LTBP4-203ENST00000308370 F6X3S4 739 aa21.18■□□□□ 0.98
LTBP4-203ENST00000308370 TRIM29Q14134 588 aa21.18■□□□□ 0.98
LTBP4-203ENST00000308370 SASS6Q6UVJ0 657 aa21.18■□□□□ 0.98
LTBP4-203ENST00000308370 NASPP49321 788 aaPredicted RBP21.18■□□□□ 0.98
LTBP4-203ENST00000308370 ZRANB1Q9UGI0 708 aa21.18■□□□□ 0.98
LTBP4-203ENST00000308370 YTHDC2Q9H6S0 1430 aaKnown RBP21.18■□□□□ 0.98
LTBP4-203ENST00000308370 AEBP2Q6ZN18 517 aaPredicted RBP21.18■□□□□ 0.98
LTBP4-203ENST00000308370 NFXL1Q6ZNB6 911 aa21.17■□□□□ 0.98
LTBP4-203ENST00000308370 ANO8Q9HCE9 1232 aaPredicted RBP21.17■□□□□ 0.98
LTBP4-203ENST00000308370 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.17■□□□□ 0.98
LTBP4-203ENST00000308370 PCMTD1Q96MG8 357 aaPredicted RBP21.16■□□□□ 0.98
LTBP4-203ENST00000308370 ATP10AO60312 1499 aa21.16■□□□□ 0.98
LTBP4-203ENST00000308370 A0A1W2PP64 1363 aa21.16■□□□□ 0.98
LTBP4-203ENST00000308370 AACSQ86V21 672 aa21.16■□□□□ 0.98
LTBP4-203ENST00000308370 PODXL2Q9NZ53 605 aa21.16■□□□□ 0.98
LTBP4-203ENST00000308370 CNNM1Q9NRU3 951 aa21.15■□□□□ 0.98
LTBP4-203ENST00000308370 TBC1D2BQ9UPU7 963 aa21.15■□□□□ 0.98
LTBP4-203ENST00000308370 PTPRCP08575 1304 aa21.15■□□□□ 0.98
LTBP4-203ENST00000308370 MAP4K4O95819 1239 aaPredicted RBP21.14■□□□□ 0.98
LTBP4-203ENST00000308370 CADPS2Q86UW7 1296 aa21.14■□□□□ 0.98
LTBP4-203ENST00000308370 IL27Q8NEV9 243 aa21.14■□□□□ 0.98
LTBP4-203ENST00000308370 ADGBQ8N7X0 1667 aa21.14■□□□□ 0.97
LTBP4-203ENST00000308370 CCDC158Q5M9N0 1113 aa21.14■□□□□ 0.97
LTBP4-203ENST00000308370 ERICH2A1L162 156 aa21.14■□□□□ 0.97
LTBP4-203ENST00000308370 PTCD1O75127 700 aaKnown RBP21.14■□□□□ 0.97
LTBP4-203ENST00000308370 FLIIQ13045 1269 aa21.14■□□□□ 0.97
LTBP4-203ENST00000308370 LARP1Q6PKG0 1096 aaKnown RBP21.13■□□□□ 0.97
LTBP4-203ENST00000308370 CCDC57Q2TAC2 916 aa21.13■□□□□ 0.97
LTBP4-203ENST00000308370 NPATQ14207 1427 aa21.12■□□□□ 0.97
LTBP4-203ENST00000308370 DBF4Q9UBU7 674 aaPredicted RBP21.12■□□□□ 0.97
LTBP4-203ENST00000308370 EIF4A2Q14240 407 aaKnown RBP21.12■□□□□ 0.97
LTBP4-203ENST00000308370 ABCC1P33527 1531 aa21.12■□□□□ 0.97
LTBP4-203ENST00000308370 NEO1Q92859 1461 aa21.12■□□□□ 0.97
LTBP4-203ENST00000308370 NPC1L1Q9UHC9 1359 aa21.12■□□□□ 0.97
LTBP4-203ENST00000308370 KIF1BPQ96EK5 621 aa21.12■□□□□ 0.97
LTBP4-203ENST00000308370 PLEKHH1Q9ULM0 1364 aa21.12■□□□□ 0.97
LTBP4-203ENST00000308370 DNAAF4Q8WXU2 420 aa21.11■□□□□ 0.97
LTBP4-203ENST00000308370 AEBP1Q8IUX7 1158 aa21.11■□□□□ 0.97
LTBP4-203ENST00000308370 SMARCA5O60264 1052 aaPredicted RBP21.11■□□□□ 0.97
LTBP4-203ENST00000308370 CCDC73Q6ZRK6 1079 aa21.11■□□□□ 0.97
LTBP4-203ENST00000308370 ANKRD24Q8TF21 1146 aa21.1■□□□□ 0.97
LTBP4-203ENST00000308370 K7ELQ4 463 aaPredicted RBP21.1■□□□□ 0.97
LTBP4-203ENST00000308370 IGHDP01880 384 aa21.1■□□□□ 0.97
LTBP4-203ENST00000308370 TTC39AQ5SRH9 613 aa21.1■□□□□ 0.97
LTBP4-203ENST00000308370 LEKR1Q6ZMV7 388 aa21.1■□□□□ 0.97
LTBP4-203ENST00000308370 TBX22Q9Y458 520 aa21.1■□□□□ 0.97
LTBP4-203ENST00000308370 NUTM1Q86Y26 1132 aa21.1■□□□□ 0.97
LTBP4-203ENST00000308370 CEP126Q9P2H0 1117 aa21.09■□□□□ 0.97
LTBP4-203ENST00000308370 ARHGAP45Q92619 1136 aa21.09■□□□□ 0.97
LTBP4-203ENST00000308370 NCKAP5LQ9HCH0 1330 aa21.09■□□□□ 0.97
LTBP4-203ENST00000308370 FOSBP53539 338 aa21.09■□□□□ 0.97
LTBP4-203ENST00000308370 RAB11FIP3O75154 756 aa21.09■□□□□ 0.97
LTBP4-203ENST00000308370 STARD3NLO95772 234 aa21.09■□□□□ 0.97
LTBP4-203ENST00000308370 MX1P20591 662 aa21.09■□□□□ 0.97
LTBP4-203ENST00000308370 PIP4K2BP78356 416 aa21.08■□□□□ 0.97
LTBP4-203ENST00000308370 MYO5CQ9NQX4 1742 aa21.08■□□□□ 0.97
LTBP4-203ENST00000308370 TRAK2O60296 914 aa21.08■□□□□ 0.97
LTBP4-203ENST00000308370 LRRFIP2Q9Y608 721 aaKnown RBP21.08■□□□□ 0.96
LTBP4-203ENST00000308370 KDM6BO15054 1643 aa21.08■□□□□ 0.96
LTBP4-203ENST00000308370 TMOD3Q9NYL9 352 aa21.08■□□□□ 0.96
LTBP4-203ENST00000308370 CYP46A1Q9Y6A2 500 aa21.08■□□□□ 0.96
LTBP4-203ENST00000308370 VPS53Q5VIR6 699 aa21.07■□□□□ 0.96
LTBP4-203ENST00000308370 HYPKQ9NX55 129 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms