RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 RARSP54136 660 aaKnown RBP18.95■□□□□ 0.62
USP42-201ENST00000306177 EPS15P42566 896 aa18.94■□□□□ 0.62
USP42-201ENST00000306177 STK3Q13188 491 aa18.94■□□□□ 0.62
USP42-201ENST00000306177 TRIM22Q8IYM9 498 aa18.94■□□□□ 0.62
USP42-201ENST00000306177 SSH1Q8WYL5 1049 aa18.94■□□□□ 0.62
USP42-201ENST00000306177 ARGLU1Q9NWB6 273 aaPredicted RBP18.94■□□□□ 0.62
USP42-201ENST00000306177 BLOC1S2Q6QNY1 142 aa18.94■□□□□ 0.62
USP42-201ENST00000306177 FKBP4Q02790 459 aaKnown RBP eCLIP18.93■□□□□ 0.62
USP42-201ENST00000306177 CEBPZQ03701 1054 aaKnown RBP18.93■□□□□ 0.62
USP42-201ENST00000306177 NKTRP30414 1462 aaKnown RBP18.93■□□□□ 0.62
USP42-201ENST00000306177 NSD2O96028 1365 aa18.93■□□□□ 0.62
USP42-201ENST00000306177 OFD1O75665 1012 aa18.92■□□□□ 0.62
USP42-201ENST00000306177 ZSCAN31Q96LW9 406 aaPredicted RBP18.92■□□□□ 0.62
USP42-201ENST00000306177 CWC27Q6UX04 472 aaKnown RBP18.92■□□□□ 0.62
USP42-201ENST00000306177 KRT85P78386 507 aa18.92■□□□□ 0.62
USP42-201ENST00000306177 CTNNA3Q9UI47 895 aa18.92■□□□□ 0.62
USP42-201ENST00000306177 FOXO3O43524 673 aa18.92■□□□□ 0.62
USP42-201ENST00000306177 SMC2O95347 1197 aa18.92■□□□□ 0.62
USP42-201ENST00000306177 TEX35Q5T0J7 233 aa18.92■□□□□ 0.62
USP42-201ENST00000306177 CDK5RAP3Q96JB5 506 aa18.92■□□□□ 0.62
USP42-201ENST00000306177 CIZ1Q9ULV3 898 aaPredicted RBP18.92■□□□□ 0.62
USP42-201ENST00000306177 LARP1BQ659C4 914 aaKnown RBP18.91■□□□□ 0.62
USP42-201ENST00000306177 PDRG1Q9NUG6 133 aa18.91■□□□□ 0.62
USP42-201ENST00000306177 CCDC69A6NI79 296 aa18.91■□□□□ 0.62
USP42-201ENST00000306177 KRT32Q14532 448 aa18.91■□□□□ 0.62
USP42-201ENST00000306177 FILIP1LQ4L180 1135 aa18.91■□□□□ 0.62
USP42-201ENST00000306177 USHBP1Q8N6Y0 703 aa18.91■□□□□ 0.62
USP42-201ENST00000306177 CCDC173Q0VFZ6 552 aa18.9■□□□□ 0.62
USP42-201ENST00000306177 ASXL2Q76L83 1435 aa18.9■□□□□ 0.62
USP42-201ENST00000306177 FMNL2Q96PY5 1086 aa18.9■□□□□ 0.62
USP42-201ENST00000306177 EXOC6BQ9Y2D4 811 aa18.9■□□□□ 0.62
USP42-201ENST00000306177 PIP4K2AP48426 406 aaPredicted RBP18.9■□□□□ 0.62
USP42-201ENST00000306177 KIF1BPQ96EK5 621 aa18.9■□□□□ 0.62
USP42-201ENST00000306177 JAKMIP1Q96N16 626 aaKnown RBP18.9■□□□□ 0.62
USP42-201ENST00000306177 TAF7Q15545 349 aaPredicted RBP18.9■□□□□ 0.62
USP42-201ENST00000306177 SYCP2Q9BX26 1530 aa18.9■□□□□ 0.62
USP42-201ENST00000306177 DUOX2Q9NRD8 1548 aa18.9■□□□□ 0.62
USP42-201ENST00000306177 ITSN2Q9NZM3 1697 aa18.89■□□□□ 0.62
USP42-201ENST00000306177 CCDC192P0DO97 292 aa18.89■□□□□ 0.62
USP42-201ENST00000306177 AMOTQ4VCS5 1084 aa18.89■□□□□ 0.62
USP42-201ENST00000306177 CT47A1Q5JQC4 288 aaPredicted RBP18.89■□□□□ 0.62
USP42-201ENST00000306177 C20orf194Q5TEA3 1177 aa18.89■□□□□ 0.61
USP42-201ENST00000306177 RAB11FIP3O75154 756 aa18.89■□□□□ 0.61
USP42-201ENST00000306177 ZNF771Q7L3S4 317 aaPredicted RBP18.89■□□□□ 0.61
USP42-201ENST00000306177 STARD3NLO95772 234 aa18.88■□□□□ 0.61
USP42-201ENST00000306177 ACBD3Q9H3P7 528 aa18.88■□□□□ 0.61
USP42-201ENST00000306177 ME1P48163 572 aa18.88■□□□□ 0.61
USP42-201ENST00000306177 R3HCC1Q9Y3T6 440 aaKnown RBP18.88■□□□□ 0.61
USP42-201ENST00000306177 CDKL5O76039 1030 aa18.88■□□□□ 0.61
USP42-201ENST00000306177 SETQ01105 290 aaPredicted RBP18.88■□□□□ 0.61
USP42-201ENST00000306177 NUTM1Q86Y26 1132 aa18.88■□□□□ 0.61
USP42-201ENST00000306177 RUFY1Q96T51 708 aa18.87■□□□□ 0.61
USP42-201ENST00000306177 MAGEC2Q9UBF1 373 aaPredicted RBP18.87■□□□□ 0.61
USP42-201ENST00000306177 MX1P20591 662 aa18.87■□□□□ 0.61
USP42-201ENST00000306177 LARP1Q6PKG0 1096 aaKnown RBP18.87■□□□□ 0.61
USP42-201ENST00000306177 TNMDQ9H2S6 317 aa18.87■□□□□ 0.61
USP42-201ENST00000306177 SMARCE1Q969G3 411 aa18.87■□□□□ 0.61
USP42-201ENST00000306177 MAPKBP1O60336 1514 aa18.87■□□□□ 0.61
USP42-201ENST00000306177 CCP110O43303 1012 aa18.87■□□□□ 0.61
USP42-201ENST00000306177 CTTNBP2Q8WZ74 1663 aa18.86■□□□□ 0.61
USP42-201ENST00000306177 GLRX3O76003 335 aaKnown RBP18.86■□□□□ 0.61
USP42-201ENST00000306177 PDIA4P13667 645 aaKnown RBP18.86■□□□□ 0.61
USP42-201ENST00000306177 PIP4K2BP78356 416 aa18.86■□□□□ 0.61
USP42-201ENST00000306177 STK11IPQ8N1F8 1099 aa18.86■□□□□ 0.61
USP42-201ENST00000306177 NUP133Q8WUM0 1156 aa18.86■□□□□ 0.61
USP42-201ENST00000306177 A2MP01023 1474 aa18.85■□□□□ 0.61
USP42-201ENST00000306177 CCAR1Q8IX12 1150 aaKnown RBP18.85■□□□□ 0.61
USP42-201ENST00000306177 TNRQ92752 1358 aa18.85■□□□□ 0.61
USP42-201ENST00000306177 PTCD1O75127 700 aaKnown RBP18.85■□□□□ 0.61
USP42-201ENST00000306177 IGHMBP2P38935 993 aaKnown RBP18.85■□□□□ 0.61
USP42-201ENST00000306177 TDO2P48775 406 aa18.85■□□□□ 0.61
USP42-201ENST00000306177 RALGAPBQ86X10 1494 aa18.85■□□□□ 0.61
USP42-201ENST00000306177 AK7Q96M32 723 aa18.85■□□□□ 0.61
USP42-201ENST00000306177 ADAMTS12P58397 1594 aa18.85■□□□□ 0.61
USP42-201ENST00000306177 TTC21BQ7Z4L5 1316 aa18.84■□□□□ 0.61
USP42-201ENST00000306177 KIAA0556O60303 1618 aa18.84■□□□□ 0.61
USP42-201ENST00000306177 DACH1Q9UI36 760 aa18.84■□□□□ 0.61
USP42-201ENST00000306177 ANKRD36BQ8N2N9 1353 aa18.84■□□□□ 0.61
USP42-201ENST00000306177 ODF2Q5BJF6 829 aa18.84■□□□□ 0.61
USP42-201ENST00000306177 KRT18P05783 430 aaKnown RBP18.84■□□□□ 0.61
USP42-201ENST00000306177 ATP2B2Q01814 1243 aa18.84■□□□□ 0.61
USP42-201ENST00000306177 DHX8Q14562 1220 aaKnown RBP18.84■□□□□ 0.61
USP42-201ENST00000306177 CFAP45Q9UL16 551 aa18.84■□□□□ 0.61
USP42-201ENST00000306177 LRPPRCP42704 1394 aaKnown RBP18.83■□□□□ 0.61
USP42-201ENST00000306177 CDR1P51861 262 aa18.83■□□□□ 0.61
USP42-201ENST00000306177 SPATA32Q96LK8 384 aa18.83■□□□□ 0.61
USP42-201ENST00000306177 UBAC1Q9BSL1 405 aa18.83■□□□□ 0.61
USP42-201ENST00000306177 NOL7Q9UMY1 257 aaKnown RBP18.83■□□□□ 0.61
USP42-201ENST00000306177 MPRIPQ6WCQ1 1025 aa18.83■□□□□ 0.6
USP42-201ENST00000306177 RAI14Q9P0K7 980 aa18.83■□□□□ 0.6
USP42-201ENST00000306177 ACEP12821 1306 aa18.83■□□□□ 0.6
USP42-201ENST00000306177 HSP90B2PQ58FF3 399 aa18.83■□□□□ 0.6
USP42-201ENST00000306177 CAGE1Q8TC20 777 aa18.83■□□□□ 0.6
USP42-201ENST00000306177 WDR7Q9Y4E6 1490 aa18.82■□□□□ 0.6
USP42-201ENST00000306177 AKAP2Q9Y2D5 859 aa18.82■□□□□ 0.6
USP42-201ENST00000306177 ZNF518AQ6AHZ1 1483 aa18.82■□□□□ 0.6
USP42-201ENST00000306177 MCM4P33991 863 aa18.82■□□□□ 0.6
USP42-201ENST00000306177 TMOD3Q9NYL9 352 aa18.82■□□□□ 0.6
USP42-201ENST00000306177 CASTP20810 708 aaKnown RBP18.82■□□□□ 0.6
USP42-201ENST00000306177 IMMTQ16891 758 aaKnown RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms