RNA–Protein interactions for RNA: ENST00000306052.10

LRP8-201, Transcript of LDL receptor related protein 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LRP8, Length 7,648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-201ENST00000306052 RNF20Q5VTR2 975 aa17.3■□□□□ 0.36
LRP8-201ENST00000306052 ZHX1Q9UKY1 873 aaPredicted RBP17.3■□□□□ 0.36
LRP8-201ENST00000306052 SMC2O95347 1197 aa17.3■□□□□ 0.36
LRP8-201ENST00000306052 NAT10Q9H0A0 1025 aaKnown RBP17.3■□□□□ 0.36
LRP8-201ENST00000306052 USHBP1Q8N6Y0 703 aa17.3■□□□□ 0.36
LRP8-201ENST00000306052 CEP170Q5SW79 1584 aa17.3■□□□□ 0.36
LRP8-201ENST00000306052 WASHC4Q2M389 1173 aa17.3■□□□□ 0.36
LRP8-201ENST00000306052 BICDL1Q6ZP65 573 aa17.3■□□□□ 0.36
LRP8-201ENST00000306052 KAT6BQ8WYB5 2073 aa17.29■□□□□ 0.36
LRP8-201ENST00000306052 BTBD11A6QL63 1104 aa17.29■□□□□ 0.36
LRP8-201ENST00000306052 PDCL2Q8N4E4 241 aa17.29■□□□□ 0.36
LRP8-201ENST00000306052 CCDC112Q8NEF3 446 aa17.29■□□□□ 0.36
LRP8-201ENST00000306052 AXDND1Q5T1B0 1012 aaPredicted RBP17.29■□□□□ 0.36
LRP8-201ENST00000306052 C8orf37Q96NL8 207 aa17.28■□□□□ 0.36
LRP8-201ENST00000306052 LMTK3Q96Q04 1460 aa17.28■□□□□ 0.36
LRP8-201ENST00000306052 NSD3Q9BZ95 1437 aa17.28■□□□□ 0.36
LRP8-201ENST00000306052 NME9Q86XW9 330 aa17.28■□□□□ 0.36
LRP8-201ENST00000306052 TAF3Q5VWG9 929 aa17.28■□□□□ 0.36
LRP8-201ENST00000306052 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.28■□□□□ 0.36
LRP8-201ENST00000306052 BRD4O60885 1362 aaPredicted RBP17.28■□□□□ 0.36
LRP8-201ENST00000306052 NUP160Q12769 1436 aa17.28■□□□□ 0.36
LRP8-201ENST00000306052 ZSCAN30Q86W11 494 aa17.28■□□□□ 0.36
LRP8-201ENST00000306052 PDCL3Q9H2J4 239 aa17.28■□□□□ 0.36
LRP8-201ENST00000306052 DUOX2Q9NRD8 1548 aa17.28■□□□□ 0.36
LRP8-201ENST00000306052 WWC2Q6AWC2 1192 aa17.28■□□□□ 0.36
LRP8-201ENST00000306052 ATP2B1P20020 1258 aa17.27■□□□□ 0.36
LRP8-201ENST00000306052 SEPT7Q16181 437 aaKnown RBP17.27■□□□□ 0.36
LRP8-201ENST00000306052 UBTFL1P0CB47 393 aaPredicted RBP17.27■□□□□ 0.36
LRP8-201ENST00000306052 STK11IPQ8N1F8 1099 aa17.27■□□□□ 0.36
LRP8-201ENST00000306052 MYO6Q9UM54 1294 aa17.27■□□□□ 0.36
LRP8-201ENST00000306052 FIBPO43427 364 aa17.27■□□□□ 0.35
LRP8-201ENST00000306052 ENOX2Q16206 610 aaKnown RBP17.27■□□□□ 0.35
LRP8-201ENST00000306052 FMNL2Q96PY5 1086 aa17.27■□□□□ 0.35
LRP8-201ENST00000306052 ABCC10Q5T3U5 1492 aa17.27■□□□□ 0.35
LRP8-201ENST00000306052 ZMYM3Q14202 1370 aa17.27■□□□□ 0.35
LRP8-201ENST00000306052 TMOD3Q9NYL9 352 aa17.26■□□□□ 0.35
LRP8-201ENST00000306052 MAP3K1Q13233 1512 aa17.26■□□□□ 0.35
LRP8-201ENST00000306052 HDGFL1Q5TGJ6 251 aa17.26■□□□□ 0.35
LRP8-201ENST00000306052 MPRIPQ6WCQ1 1025 aa17.26■□□□□ 0.35
LRP8-201ENST00000306052 RALYLQ86SE5 291 aaKnown RBP17.26■□□□□ 0.35
LRP8-201ENST00000306052 ERCC4Q92889 916 aaPredicted RBP17.26■□□□□ 0.35
LRP8-201ENST00000306052 PTCD1O75127 700 aaKnown RBP17.26■□□□□ 0.35
LRP8-201ENST00000306052 NEK4P51957 841 aa17.26■□□□□ 0.35
LRP8-201ENST00000306052 BRMS1Q9HCU9 246 aa17.26■□□□□ 0.35
LRP8-201ENST00000306052 AEBP1Q8IUX7 1158 aa17.26■□□□□ 0.35
LRP8-201ENST00000306052 K7ELQ4 463 aaPredicted RBP17.25■□□□□ 0.35
LRP8-201ENST00000306052 SDF4Q9BRK5 362 aa17.25■□□□□ 0.35
LRP8-201ENST00000306052 CFAP65Q6ZU64 1925 aaKnown RBP17.25■□□□□ 0.35
LRP8-201ENST00000306052 CHRNA2Q15822 529 aa17.25■□□□□ 0.35
LRP8-201ENST00000306052 BCAR3O75815 825 aa17.25■□□□□ 0.35
LRP8-201ENST00000306052 SYCP1Q15431 976 aa17.25■□□□□ 0.35
LRP8-201ENST00000306052 EXOC5O00471 708 aa17.25■□□□□ 0.35
LRP8-201ENST00000306052 CEBPZQ03701 1054 aaKnown RBP17.25■□□□□ 0.35
LRP8-201ENST00000306052 CCDC184Q52MB2 194 aa17.24■□□□□ 0.35
LRP8-201ENST00000306052 AAMPQ13685 434 aa17.24■□□□□ 0.35
LRP8-201ENST00000306052 SKAP1Q86WV1 359 aa17.24■□□□□ 0.35
LRP8-201ENST00000306052 CCAR1Q8IX12 1150 aaKnown RBP17.24■□□□□ 0.35
LRP8-201ENST00000306052 PNISRQ8TF01 805 aaKnown RBP17.24■□□□□ 0.35
LRP8-201ENST00000306052 CENPHQ9H3R5 247 aa17.24■□□□□ 0.35
LRP8-201ENST00000306052 RIMS2Q9UQ26 1411 aa17.23■□□□□ 0.35
LRP8-201ENST00000306052 RABEP1Q15276 862 aa17.23■□□□□ 0.35
LRP8-201ENST00000306052 ZRSR2Q15696 482 aaKnown RBP17.23■□□□□ 0.35
LRP8-201ENST00000306052 CDK5RAP3Q96JB5 506 aa17.23■□□□□ 0.35
LRP8-201ENST00000306052 CCDC97Q96F63 343 aaPredicted RBP17.22■□□□□ 0.35
LRP8-201ENST00000306052 CGNQ9P2M7 1197 aaKnown RBP17.22■□□□□ 0.35
LRP8-201ENST00000306052 TWISTNBQ3B726 338 aaPredicted RBP17.22■□□□□ 0.35
LRP8-201ENST00000306052 CNNM1Q9NRU3 951 aa17.22■□□□□ 0.35
LRP8-201ENST00000306052 MAGEC2Q9UBF1 373 aaPredicted RBP17.22■□□□□ 0.35
LRP8-201ENST00000306052 CT47B1P0C2W7 299 aaPredicted RBP17.22■□□□□ 0.35
LRP8-201ENST00000306052 C1orf115Q9H7X2 142 aa17.22■□□□□ 0.35
LRP8-201ENST00000306052 UHRF1BP1Q6BDS2 1440 aa17.21■□□□□ 0.35
LRP8-201ENST00000306052 STARD3NLO95772 234 aa17.21■□□□□ 0.35
LRP8-201ENST00000306052 IBSPP21815 317 aaPredicted RBP17.21■□□□□ 0.35
LRP8-201ENST00000306052 ATP2B2Q01814 1243 aa17.21■□□□□ 0.35
LRP8-201ENST00000306052 GNAT3A8MTJ3 354 aa17.21■□□□□ 0.35
LRP8-201ENST00000306052 FAM177A1Q8N128 213 aaPredicted RBP17.21■□□□□ 0.34
LRP8-201ENST00000306052 C14orf93Q9H972 538 aaKnown RBP17.2■□□□□ 0.34
LRP8-201ENST00000306052 SLC4A2P04920 1241 aa17.2■□□□□ 0.34
LRP8-201ENST00000306052 TAX1BP1Q86VP1 789 aa17.2■□□□□ 0.34
LRP8-201ENST00000306052 ZPR1O75312 459 aa17.2■□□□□ 0.34
LRP8-201ENST00000306052 CCDC192P0DO97 292 aa17.2■□□□□ 0.34
LRP8-201ENST00000306052 SYCE3A1L190 88 aa17.2■□□□□ 0.34
LRP8-201ENST00000306052 CCP110O43303 1012 aa17.2■□□□□ 0.34
LRP8-201ENST00000306052 ACEP12821 1306 aa17.2■□□□□ 0.34
LRP8-201ENST00000306052 TSR2Q969E8 191 aaKnown RBP17.2■□□□□ 0.34
LRP8-201ENST00000306052 TRERF1Q96PN7 1200 aa17.2■□□□□ 0.34
LRP8-201ENST00000306052 ABCA5Q8WWZ7 1642 aa17.19■□□□□ 0.34
LRP8-201ENST00000306052 XBP1P17861 261 aa17.19■□□□□ 0.34
LRP8-201ENST00000306052 ZHX3Q9H4I2 956 aa17.19■□□□□ 0.34
LRP8-201ENST00000306052 KRT18P05783 430 aaKnown RBP17.19■□□□□ 0.34
LRP8-201ENST00000306052 FAM193AP78312 1265 aa17.19■□□□□ 0.34
LRP8-201ENST00000306052 EXOSC9Q06265 439 aaKnown RBP17.19■□□□□ 0.34
LRP8-201ENST00000306052 NPHP3Q7Z494 1330 aa17.19■□□□□ 0.34
LRP8-201ENST00000306052 HSP90AB4PQ58FF6 505 aa17.19■□□□□ 0.34
LRP8-201ENST00000306052 HMGB2P26583 209 aaKnown RBP17.18■□□□□ 0.34
LRP8-201ENST00000306052 WDR97A6NE52 1622 aa17.18■□□□□ 0.34
LRP8-201ENST00000306052 DEF6Q9H4E7 631 aa17.18■□□□□ 0.34
LRP8-201ENST00000306052 KINO60870 393 aaKnown RBP17.18■□□□□ 0.34
LRP8-201ENST00000306052 MIS18AQ9NYP9 233 aa17.17■□□□□ 0.34
LRP8-201ENST00000306052 CHD1O14646 1710 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms