RNA–Protein interactions for RNA: ENST00000305978.6

SCAND1-201, Transcript of SCAN domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAND1, Length 902 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAND1-201ENST00000305978 PROM2Q8N271 834 aa21.48■■□□□ 1.03
SCAND1-201ENST00000305978 USHBP1Q8N6Y0 703 aa21.48■■□□□ 1.03
SCAND1-201ENST00000305978 LY75O60449 1722 aa21.48■■□□□ 1.03
SCAND1-201ENST00000305978 PAPPAQ13219 1627 aa21.47■■□□□ 1.03
SCAND1-201ENST00000305978 DDX54Q8TDD1 881 aaKnown RBP21.47■■□□□ 1.03
SCAND1-201ENST00000305978 PANK3Q9H999 370 aa21.47■■□□□ 1.03
SCAND1-201ENST00000305978 ZCRB1Q8TBF4 217 aaKnown RBP21.46■■□□□ 1.03
SCAND1-201ENST00000305978 NCAPD2Q15021 1401 aa21.46■■□□□ 1.03
SCAND1-201ENST00000305978 ITGB4P16144 1822 aa21.45■■□□□ 1.03
SCAND1-201ENST00000305978 TXNRD1Q16881 649 aa21.45■■□□□ 1.02
SCAND1-201ENST00000305978 NSD2O96028 1365 aa21.45■■□□□ 1.02
SCAND1-201ENST00000305978 RAPGEF4Q8WZA2 1011 aa21.44■■□□□ 1.02
SCAND1-201ENST00000305978 ANO8Q9HCE9 1232 aaPredicted RBP21.44■■□□□ 1.02
SCAND1-201ENST00000305978 PPM1GO15355 546 aaPredicted RBP21.43■■□□□ 1.02
SCAND1-201ENST00000305978 POLKQ9UBT6 870 aa21.43■■□□□ 1.02
SCAND1-201ENST00000305978 WASHC2AQ641Q2 1341 aa21.43■■□□□ 1.02
SCAND1-201ENST00000305978 QSER1Q2KHR3 1735 aa21.43■■□□□ 1.02
SCAND1-201ENST00000305978 TOGARAM1Q9Y4F4 1720 aa21.43■■□□□ 1.02
SCAND1-201ENST00000305978 TATP17735 454 aaPredicted RBP21.41■■□□□ 1.02
SCAND1-201ENST00000305978 TUBGCP6Q96RT7 1819 aa21.41■■□□□ 1.02
SCAND1-201ENST00000305978 KIF7Q2M1P5 1343 aa21.4■■□□□ 1.02
SCAND1-201ENST00000305978 TNNT2P45379 298 aaPredicted RBP21.4■■□□□ 1.02
SCAND1-201ENST00000305978 PCDH11XQ9BZA7 1347 aa21.37■■□□□ 1.01
SCAND1-201ENST00000305978 PCDH11YQ9BZA8 1340 aa21.37■■□□□ 1.01
SCAND1-201ENST00000305978 TAF1LQ8IZX4 1826 aa21.36■■□□□ 1.01
SCAND1-201ENST00000305978 PRIM1P49642 420 aaKnown RBP21.36■■□□□ 1.01
SCAND1-201ENST00000305978 EYA1Q99502 592 aa21.36■■□□□ 1.01
SCAND1-201ENST00000305978 STK32BQ9NY57 414 aa21.36■■□□□ 1.01
SCAND1-201ENST00000305978 SYTL4Q96C24 671 aaPredicted RBP21.35■■□□□ 1.01
SCAND1-201ENST00000305978 KNSTRNQ9Y448 316 aa21.35■■□□□ 1.01
SCAND1-201ENST00000305978 SLC15A2Q16348 729 aa21.34■■□□□ 1.01
SCAND1-201ENST00000305978 C5P01031 1676 aa21.34■■□□□ 1.01
SCAND1-201ENST00000305978 EIF4A2Q14240 407 aaKnown RBP21.33■■□□□ 1.01
SCAND1-201ENST00000305978 MORC1Q86VD1 984 aa21.33■■□□□ 1.01
SCAND1-201ENST00000305978 SPON1Q9HCB6 807 aa21.33■■□□□ 1.01
SCAND1-201ENST00000305978 CYP27B1O15528 508 aa21.32■■□□□ 1
SCAND1-201ENST00000305978 PDGFDQ9GZP0 370 aaPredicted RBP21.32■■□□□ 1
SCAND1-201ENST00000305978 LRRC4BQ9NT99 713 aa21.32■■□□□ 1
SCAND1-201ENST00000305978 AMER1Q5JTC6 1135 aaPredicted RBP21.3■■□□□ 1
SCAND1-201ENST00000305978 SLC27A3Q5K4L6 730 aa21.3■■□□□ 1
SCAND1-201ENST00000305978 PLEKHG2Q9H7P9 1386 aa21.3■■□□□ 1
SCAND1-201ENST00000305978 COL24A1Q17RW2 1714 aa21.29■■□□□ 1
SCAND1-201ENST00000305978 VIRMAQ69YN4 1812 aaKnown RBP21.29■■□□□ 1
SCAND1-201ENST00000305978 IGSF1Q8N6C5 1336 aa21.29■■□□□ 1
SCAND1-201ENST00000305978 ZNF827Q17R98 1081 aa21.28■■□□□ 1
SCAND1-201ENST00000305978 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.28■■□□□ 1
SCAND1-201ENST00000305978 SPG7Q9UQ90 795 aa21.28■■□□□ 1
SCAND1-201ENST00000305978 PER1O15534 1290 aaPredicted RBP21.25■□□□□ 0.99
SCAND1-201ENST00000305978 ZBTB7AO95365 584 aa21.25■□□□□ 0.99
SCAND1-201ENST00000305978 NKX1-1Q15270 411 aaPredicted RBP21.25■□□□□ 0.99
SCAND1-201ENST00000305978 AKT1S1Q96B36 256 aa21.25■□□□□ 0.99
SCAND1-201ENST00000305978 KCNQ4P56696 695 aa21.24■□□□□ 0.99
SCAND1-201ENST00000305978 PPP1R1BQ9UD71 204 aaPredicted RBP21.24■□□□□ 0.99
SCAND1-201ENST00000305978 MPRIPQ6WCQ1 1025 aa21.22■□□□□ 0.99
SCAND1-201ENST00000305978 CCNL1Q9UK58 526 aaPredicted RBP21.22■□□□□ 0.99
SCAND1-201ENST00000305978 SCN11AQ9UI33 1791 aa21.21■□□□□ 0.99
SCAND1-201ENST00000305978 PHKG2P15735 406 aa21.21■□□□□ 0.99
SCAND1-201ENST00000305978 PTGER2P43116 358 aa21.21■□□□□ 0.99
SCAND1-201ENST00000305978 IFNL2Q8IZJ0 200 aa21.21■□□□□ 0.99
SCAND1-201ENST00000305978 MTFR1LQ9H019 292 aa21.21■□□□□ 0.99
SCAND1-201ENST00000305978 ATF5Q9Y2D1 282 aaPredicted RBP21.21■□□□□ 0.99
SCAND1-201ENST00000305978 UBR3Q6ZT12 1888 aa21.21■□□□□ 0.99
SCAND1-201ENST00000305978 PALLDQ8WX93 1383 aa21.21■□□□□ 0.99
SCAND1-201ENST00000305978 C4BP0C0L5 1744 aa21.21■□□□□ 0.99
SCAND1-201ENST00000305978 NPC1L1Q9UHC9 1359 aa21.2■□□□□ 0.98
SCAND1-201ENST00000305978 IL13P35225 146 aa21.18■□□□□ 0.98
SCAND1-201ENST00000305978 CC2D1BQ5T0F9 858 aaKnown RBP21.18■□□□□ 0.98
SCAND1-201ENST00000305978 PNPLA7Q6ZV29 1317 aa21.18■□□□□ 0.98
SCAND1-201ENST00000305978 KDRP35968 1356 aa21.18■□□□□ 0.98
SCAND1-201ENST00000305978 ZNF831Q5JPB2 1677 aa21.18■□□□□ 0.98
SCAND1-201ENST00000305978 AEBP1Q8IUX7 1158 aa21.17■□□□□ 0.98
SCAND1-201ENST00000305978 PIGBQ92521 554 aa21.17■□□□□ 0.98
SCAND1-201ENST00000305978 SGIP1Q9BQI5 828 aa21.17■□□□□ 0.98
SCAND1-201ENST00000305978 TFCP2L1Q9NZI6 479 aa21.17■□□□□ 0.98
SCAND1-201ENST00000305978 MTHFSP49914 203 aa21.16■□□□□ 0.98
SCAND1-201ENST00000305978 SMARCC1Q92922 1105 aaPredicted RBP21.16■□□□□ 0.98
SCAND1-201ENST00000305978 PLEKHO1Q53GL0 409 aaPredicted RBP21.15■□□□□ 0.98
SCAND1-201ENST00000305978 TMOD3Q9NYL9 352 aa21.15■□□□□ 0.98
SCAND1-201ENST00000305978 AMOTQ4VCS5 1084 aa21.14■□□□□ 0.97
SCAND1-201ENST00000305978 SULT6B1Q6IMI4 303 aa21.14■□□□□ 0.97
SCAND1-201ENST00000305978 SLC16A10Q8TF71 515 aa21.14■□□□□ 0.97
SCAND1-201ENST00000305978 COL5A3P25940 1745 aaPredicted RBP21.14■□□□□ 0.97
SCAND1-201ENST00000305978 KDM6AO15550 1401 aaPredicted RBP21.13■□□□□ 0.97
SCAND1-201ENST00000305978 ZNF530Q6P9A1 599 aaPredicted RBP21.13■□□□□ 0.97
SCAND1-201ENST00000305978 COL3A1P02461 1466 aaPredicted RBP21.13■□□□□ 0.97
SCAND1-201ENST00000305978 HMGB2P26583 209 aaKnown RBP21.12■□□□□ 0.97
SCAND1-201ENST00000305978 HSP90AB1P08238 724 aaKnown RBP21.11■□□□□ 0.97
SCAND1-201ENST00000305978 DCAF5Q96JK2 942 aa21.11■□□□□ 0.97
SCAND1-201ENST00000305978 ERVV-2B6SEH9 535 aa21.1■□□□□ 0.97
SCAND1-201ENST00000305978 ASAP1Q9ULH1 1129 aa21.1■□□□□ 0.97
SCAND1-201ENST00000305978 ADAMTS7Q9UKP4 1686 aa21.09■□□□□ 0.97
SCAND1-201ENST00000305978 ARXQ96QS3 562 aa21.09■□□□□ 0.97
SCAND1-201ENST00000305978 LOC102724428A0A0B4J2F2 783 aa21.08■□□□□ 0.97
SCAND1-201ENST00000305978 SIK1P57059 783 aa21.08■□□□□ 0.97
SCAND1-201ENST00000305978 CNGB1Q14028 1251 aaPredicted RBP21.08■□□□□ 0.97
SCAND1-201ENST00000305978 COL23A1Q86Y22 540 aaPredicted RBP21.08■□□□□ 0.97
SCAND1-201ENST00000305978 FHDC1Q9C0D6 1143 aaPredicted RBP21.08■□□□□ 0.97
SCAND1-201ENST00000305978 UTRNP46939 3433 aa21.07■□□□□ 0.96
SCAND1-201ENST00000305978 DIAPH1O60610 1272 aaKnown RBP21.07■□□□□ 0.96
SCAND1-201ENST00000305978 C1orf141Q5JVX7 400 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 164 ms