RNA–Protein interactions for RNA: ENST00000304177.9

C15orf40-201, Transcript of chromosome 15 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C15orf40, Length 11,244 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C15orf40-201ENST00000304177 SOGA3Q5TF21 947 aa14.38□□□□□ -0.11
C15orf40-201ENST00000304177 PTPN14Q15678 1187 aa14.38□□□□□ -0.11
C15orf40-201ENST00000304177 UBAC1Q9BSL1 405 aa14.38□□□□□ -0.11
C15orf40-201ENST00000304177 FKBP4Q02790 459 aaKnown RBP eCLIP14.38□□□□□ -0.11
C15orf40-201ENST00000304177 C16orf45Q96MC5 204 aaPredicted RBP14.38□□□□□ -0.11
C15orf40-201ENST00000304177 DESP17661 470 aa14.38□□□□□ -0.11
C15orf40-201ENST00000304177 CWC27Q6UX04 472 aaKnown RBP14.38□□□□□ -0.11
C15orf40-201ENST00000304177 PPP1R1BQ9UD71 204 aaPredicted RBP14.38□□□□□ -0.11
C15orf40-201ENST00000304177 KIF5CO60282 957 aa14.37□□□□□ -0.11
C15orf40-201ENST00000304177 ZNF76P36508 570 aa14.37□□□□□ -0.11
C15orf40-201ENST00000304177 ZNF397Q8NF99 534 aaPredicted RBP14.37□□□□□ -0.11
C15orf40-201ENST00000304177 UBA5Q9GZZ9 404 aa14.37□□□□□ -0.11
C15orf40-201ENST00000304177 CUX1P39880 1505 aa14.37□□□□□ -0.11
C15orf40-201ENST00000304177 STAMBPO95630 424 aa14.37□□□□□ -0.11
C15orf40-201ENST00000304177 MCM4P33991 863 aa14.37□□□□□ -0.11
C15orf40-201ENST00000304177 CCDC158Q5M9N0 1113 aa14.37□□□□□ -0.11
C15orf40-201ENST00000304177 PPP4R3BQ5MIZ7 849 aa14.37□□□□□ -0.11
C15orf40-201ENST00000304177 CTR9Q6PD62 1173 aa14.37□□□□□ -0.11
C15orf40-201ENST00000304177 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.37□□□□□ -0.11
C15orf40-201ENST00000304177 SETD1BQ9UPS6 1966 aaKnown RBP14.37□□□□□ -0.11
C15orf40-201ENST00000304177 PPM1FP49593 454 aaPredicted RBP14.37□□□□□ -0.11
C15orf40-201ENST00000304177 RBM42Q9BTD8 480 aaKnown RBP14.37□□□□□ -0.11
C15orf40-201ENST00000304177 CHMP4BP1P59074 171 aa14.36□□□□□ -0.11
C15orf40-201ENST00000304177 TRMT1Q9NXH9 659 aaKnown RBP14.36□□□□□ -0.11
C15orf40-201ENST00000304177 ZSCAN30Q86W11 494 aa14.36□□□□□ -0.11
C15orf40-201ENST00000304177 BMP2KQ9NSY1 1161 aaPredicted RBP14.36□□□□□ -0.11
C15orf40-201ENST00000304177 MPHOSPH10O00566 681 aaKnown RBP14.36□□□□□ -0.11
C15orf40-201ENST00000304177 ATP2C2O75185 946 aa14.36□□□□□ -0.11
C15orf40-201ENST00000304177 SPDYE4A6NLX3 237 aa14.36□□□□□ -0.11
C15orf40-201ENST00000304177 FERMT3Q86UX7 667 aa14.36□□□□□ -0.11
C15orf40-201ENST00000304177 KIF18AQ8NI77 898 aa14.36□□□□□ -0.11
C15orf40-201ENST00000304177 CCDC175P0C221 793 aa14.36□□□□□ -0.11
C15orf40-201ENST00000304177 POTEJP0CG39 1038 aa14.36□□□□□ -0.11
C15orf40-201ENST00000304177 SMC1AQ14683 1233 aaKnown RBP14.36□□□□□ -0.11
C15orf40-201ENST00000304177 TCP11L2Q8N4U5 519 aa14.36□□□□□ -0.11
C15orf40-201ENST00000304177 PRKAR2BP31323 418 aa14.35□□□□□ -0.11
C15orf40-201ENST00000304177 HOOK3Q86VS8 718 aa14.35□□□□□ -0.11
C15orf40-201ENST00000304177 IMMTQ16891 758 aaKnown RBP14.35□□□□□ -0.11
C15orf40-201ENST00000304177 MAATS1Q7Z4T9 603 aa14.35□□□□□ -0.11
C15orf40-201ENST00000304177 SMTNL1A8MU46 457 aa14.35□□□□□ -0.11
C15orf40-201ENST00000304177 KIF2AO00139 706 aaPredicted RBP14.35□□□□□ -0.11
C15orf40-201ENST00000304177 EXOSC9Q06265 439 aaKnown RBP14.35□□□□□ -0.11
C15orf40-201ENST00000304177 SMARCA2P51531 1590 aa14.35□□□□□ -0.11
C15orf40-201ENST00000304177 BLOC1S2Q6QNY1 142 aa14.35□□□□□ -0.11
C15orf40-201ENST00000304177 SPATA24Q86W54 205 aa14.35□□□□□ -0.11
C15orf40-201ENST00000304177 CALCOCO1Q9P1Z2 691 aa14.35□□□□□ -0.11
C15orf40-201ENST00000304177 USP5P45974 858 aa14.34□□□□□ -0.11
C15orf40-201ENST00000304177 SMG6Q86US8 1419 aaKnown RBP14.34□□□□□ -0.11
C15orf40-201ENST00000304177 CLIP2Q9UDT6 1046 aa14.34□□□□□ -0.11
C15orf40-201ENST00000304177 TTC16Q8NEE8 873 aa14.34□□□□□ -0.11
C15orf40-201ENST00000304177 NUP88Q99567 741 aaPredicted RBP14.34□□□□□ -0.11
C15orf40-201ENST00000304177 CCDC57Q2TAC2 916 aa14.34□□□□□ -0.11
C15orf40-201ENST00000304177 SPTY2D1Q68D10 685 aaPredicted RBP14.33□□□□□ -0.12
C15orf40-201ENST00000304177 TWISTNBQ3B726 338 aaPredicted RBP14.33□□□□□ -0.12
C15orf40-201ENST00000304177 WASHC2AQ641Q2 1341 aa14.33□□□□□ -0.12
C15orf40-201ENST00000304177 CCDC183Q5T5S1 534 aa14.33□□□□□ -0.12
C15orf40-201ENST00000304177 SLC4A2P04920 1241 aa14.33□□□□□ -0.12
C15orf40-201ENST00000304177 MTHFSP49914 203 aa14.33□□□□□ -0.12
C15orf40-201ENST00000304177 STRN4Q9NRL3 753 aa14.33□□□□□ -0.12
C15orf40-201ENST00000304177 TMCO5BA8MYB1 307 aa14.32□□□□□ -0.12
C15orf40-201ENST00000304177 MYL6BP14649 208 aa14.32□□□□□ -0.12
C15orf40-201ENST00000304177 ATF3P18847 181 aa14.32□□□□□ -0.12
C15orf40-201ENST00000304177 BACH2Q9BYV9 841 aa14.32□□□□□ -0.12
C15orf40-201ENST00000304177 GBP3Q9H0R5 595 aa14.32□□□□□ -0.12
C15orf40-201ENST00000304177 LMAN1P49257 510 aa14.32□□□□□ -0.12
C15orf40-201ENST00000304177 MPHOSPH8Q99549 860 aa14.32□□□□□ -0.12
C15orf40-201ENST00000304177 GCC1Q96CN9 775 aa14.32□□□□□ -0.12
C15orf40-201ENST00000304177 TOP1P11387 765 aaKnown RBP14.32□□□□□ -0.12
C15orf40-201ENST00000304177 PPP6R1Q9UPN7 881 aa14.32□□□□□ -0.12
C15orf40-201ENST00000304177 KIF4BQ2VIQ3 1234 aa14.32□□□□□ -0.12
C15orf40-201ENST00000304177 MICALCLQ6ZW33 695 aa14.32□□□□□ -0.12
C15orf40-201ENST00000304177 HDGFL1Q5TGJ6 251 aa14.32□□□□□ -0.12
C15orf40-201ENST00000304177 HLTFQ14527 1009 aaKnown RBP eCLIP14.31□□□□□ -0.12
C15orf40-201ENST00000304177 DDX54Q8TDD1 881 aaKnown RBP14.31□□□□□ -0.12
C15orf40-201ENST00000304177 PPP1R12BO60237 982 aaPredicted RBP14.31□□□□□ -0.12
C15orf40-201ENST00000304177 ZSCAN12O43309 604 aa14.31□□□□□ -0.12
C15orf40-201ENST00000304177 URI1O94763 535 aaPredicted RBP14.31□□□□□ -0.12
C15orf40-201ENST00000304177 CHD1LQ86WJ1 897 aa14.31□□□□□ -0.12
C15orf40-201ENST00000304177 CCDC85AQ96PX6 553 aaPredicted RBP14.31□□□□□ -0.12
C15orf40-201ENST00000304177 CCT4P50991 539 aaKnown RBP14.31□□□□□ -0.12
C15orf40-201ENST00000304177 SEC63Q9UGP8 760 aaKnown RBP14.31□□□□□ -0.12
C15orf40-201ENST00000304177 COMMD10Q9Y6G5 202 aa14.31□□□□□ -0.12
C15orf40-201ENST00000304177 CKAP2LQ8IYA6 745 aa14.3□□□□□ -0.12
C15orf40-201ENST00000304177 PHF23Q9BUL5 403 aaPredicted RBP14.3□□□□□ -0.12
C15orf40-201ENST00000304177 MNAT1P51948 309 aa14.3□□□□□ -0.12
C15orf40-201ENST00000304177 VPS36Q86VN1 386 aa14.3□□□□□ -0.12
C15orf40-201ENST00000304177 FKBP15Q5T1M5 1219 aa14.3□□□□□ -0.12
C15orf40-201ENST00000304177 NLRP6P59044 892 aa14.3□□□□□ -0.12
C15orf40-201ENST00000304177 RRBP1Q9P2E9 1410 aaKnown RBP14.3□□□□□ -0.12
C15orf40-201ENST00000304177 TOP2AP11388 1531 aaKnown RBP14.3□□□□□ -0.12
C15orf40-201ENST00000304177 GCOM1H8Y6P7 765 aaPredicted RBP14.3□□□□□ -0.12
C15orf40-201ENST00000304177 MYZAPP0CAP1 466 aa14.3□□□□□ -0.12
C15orf40-201ENST00000304177 TMEM132EQ6IEE7 984 aa14.3□□□□□ -0.12
C15orf40-201ENST00000304177 ABTB2Q8N961 1025 aa14.3□□□□□ -0.12
C15orf40-201ENST00000304177 CETN2P41208 172 aa14.3□□□□□ -0.12
C15orf40-201ENST00000304177 GOLGA4Q13439 2230 aaKnown RBP14.29□□□□□ -0.12
C15orf40-201ENST00000304177 MCM3P25205 808 aa14.29□□□□□ -0.12
C15orf40-201ENST00000304177 CCDC96Q2M329 555 aa14.29□□□□□ -0.12
C15orf40-201ENST00000304177 PPP2R1AP30153 589 aa14.29□□□□□ -0.12
C15orf40-201ENST00000304177 C11orf95C9JLR9 678 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms