RNA–Protein interactions for RNA: ENST00000302445.7

KARS-201, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best) BASIC

Gene KARS, Length 2,005 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-201ENST00000302445 UVSSAQ2YD98 709 aa16.92■□□□□ 0.3
KARS-201ENST00000302445 TMEM63CQ9P1W3 806 aa16.92■□□□□ 0.3
KARS-201ENST00000302445 ABCC3O15438 1527 aa16.92■□□□□ 0.3
KARS-201ENST00000302445 GNAI1P63096 354 aa16.92■□□□□ 0.3
KARS-201ENST00000302445 TERF2IPQ9NYB0 399 aa16.91■□□□□ 0.3
KARS-201ENST00000302445 ZDHHC9Q9Y397 364 aa16.91■□□□□ 0.3
KARS-201ENST00000302445 CD163L1Q9NR16 1453 aa16.91■□□□□ 0.3
KARS-201ENST00000302445 DMTNQ08495 405 aa16.9■□□□□ 0.3
KARS-201ENST00000302445 TSPY26PQ9H489 355 aa16.9■□□□□ 0.3
KARS-201ENST00000302445 SYCE3A1L190 88 aa16.89■□□□□ 0.29
KARS-201ENST00000302445 ZNF853P0CG23 659 aa16.89■□□□□ 0.29
KARS-201ENST00000302445 PKP1Q13835 747 aa16.89■□□□□ 0.29
KARS-201ENST00000302445 NFE2L2Q16236 605 aa16.89■□□□□ 0.29
KARS-201ENST00000302445 CPSF1Q10570 1443 aaKnown RBP16.88■□□□□ 0.29
KARS-201ENST00000302445 ATP10DQ9P241 1426 aa16.88■□□□□ 0.29
KARS-201ENST00000302445 TUBGCP6Q96RT7 1819 aa16.88■□□□□ 0.29
KARS-201ENST00000302445 RPAP2Q8IXW5 612 aaPredicted RBP16.88■□□□□ 0.29
KARS-201ENST00000302445 PIBF1Q8WXW3 757 aa16.88■□□□□ 0.29
KARS-201ENST00000302445 INTS4Q96HW7 963 aaKnown RBP16.88■□□□□ 0.29
KARS-201ENST00000302445 FYB1O15117 783 aa16.87■□□□□ 0.29
KARS-201ENST00000302445 VGFO15240 615 aaPredicted RBP16.87■□□□□ 0.29
KARS-201ENST00000302445 BRD1O95696 1058 aa16.87■□□□□ 0.29
KARS-201ENST00000302445 RBM27Q9P2N5 1060 aaKnown RBP16.87■□□□□ 0.29
KARS-201ENST00000302445 DLG5Q8TDM6 1919 aa16.87■□□□□ 0.29
KARS-201ENST00000302445 HAP1P54257 671 aaPredicted RBP16.87■□□□□ 0.29
KARS-201ENST00000302445 LMOD3Q0VAK6 560 aa16.87■□□□□ 0.29
KARS-201ENST00000302445 ANKRD44Q8N8A2 993 aa16.87■□□□□ 0.29
KARS-201ENST00000302445 GTPBP4Q9BZE4 634 aaKnown RBP16.87■□□□□ 0.29
KARS-201ENST00000302445 C1orf115Q9H7X2 142 aa16.87■□□□□ 0.29
KARS-201ENST00000302445 CUL4AQ13619 759 aa16.86■□□□□ 0.29
KARS-201ENST00000302445 TMEM132EQ6IEE7 984 aa16.86■□□□□ 0.29
KARS-201ENST00000302445 IL17RAQ96F46 866 aa16.86■□□□□ 0.29
KARS-201ENST00000302445 PTPRMP28827 1452 aa16.86■□□□□ 0.29
KARS-201ENST00000302445 ERC2O15083 957 aa16.86■□□□□ 0.29
KARS-201ENST00000302445 ZGPATQ8N5A5 531 aaKnown RBP16.86■□□□□ 0.29
KARS-201ENST00000302445 PTMAP06454 111 aaKnown RBP16.85■□□□□ 0.29
KARS-201ENST00000302445 RNF39Q9H2S5 420 aa16.85■□□□□ 0.29
KARS-201ENST00000302445 GGNBP2Q9H3C7 697 aa16.85■□□□□ 0.29
KARS-201ENST00000302445 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.85■□□□□ 0.292e-6■□□□□ 9.3
KARS-201ENST00000302445 SSH2Q76I76 1423 aa16.84■□□□□ 0.29
KARS-201ENST00000302445 OSBPL3Q9H4L5 887 aa16.84■□□□□ 0.29
KARS-201ENST00000302445 CABP2Q9NPB3 220 aa16.84■□□□□ 0.29
KARS-201ENST00000302445 SDSP20132 328 aa16.84■□□□□ 0.29
KARS-201ENST00000302445 ANAPC15P60006 121 aa16.84■□□□□ 0.29
KARS-201ENST00000302445 SPTLC3Q9NUV7 552 aa16.84■□□□□ 0.29
KARS-201ENST00000302445 EPB41L2O43491 1005 aaKnown RBP16.83■□□□□ 0.28
KARS-201ENST00000302445 LETM1O95202 739 aaPredicted RBP16.83■□□□□ 0.28
KARS-201ENST00000302445 TWISTNBQ3B726 338 aaPredicted RBP16.83■□□□□ 0.28
KARS-201ENST00000302445 CDK12Q9NYV4 1490 aaPredicted RBP16.83■□□□□ 0.28
KARS-201ENST00000302445 KIF20AO95235 890 aa16.82■□□□□ 0.28
KARS-201ENST00000302445 PRKAR2BP31323 418 aa16.82■□□□□ 0.28
KARS-201ENST00000302445 PODXL2Q9NZ53 605 aa16.82■□□□□ 0.28
KARS-201ENST00000302445 SIGLEC1Q9BZZ2 1709 aa16.82■□□□□ 0.28
KARS-201ENST00000302445 ATP7BP35670 1465 aa16.82■□□□□ 0.28
KARS-201ENST00000302445 MAP2P11137 1827 aaKnown RBP16.82■□□□□ 0.28
KARS-201ENST00000302445 ARHGEF40Q8TER5 1519 aa16.82■□□□□ 0.28
KARS-201ENST00000302445 CHGAP10645 457 aaKnown RBP16.82■□□□□ 0.28
KARS-201ENST00000302445 ZSCAN20P17040 1043 aaPredicted RBP16.82■□□□□ 0.28
KARS-201ENST00000302445 MKRN4PQ13434 485 aaPredicted RBP16.82■□□□□ 0.28
KARS-201ENST00000302445 HDGFL2Q7Z4V5 671 aaPredicted RBP16.82■□□□□ 0.28
KARS-201ENST00000302445 TMEM87AQ8NBN3 555 aa16.82■□□□□ 0.28
KARS-201ENST00000302445 RTL1A6NKG5 1358 aa16.81■□□□□ 0.28
KARS-201ENST00000302445 TPM3P06753 285 aa16.8■□□□□ 0.28
KARS-201ENST00000302445 FKBP5Q13451 457 aaPredicted RBP16.8■□□□□ 0.28
KARS-201ENST00000302445 TMX3Q96JJ7 454 aa16.8■□□□□ 0.28
KARS-201ENST00000302445 MBIPQ9NS73 344 aa16.8■□□□□ 0.28
KARS-201ENST00000302445 NSFL1CQ9UNZ2 370 aaKnown RBP16.8■□□□□ 0.28
KARS-201ENST00000302445 MLH3Q9UHC1 1453 aa16.8■□□□□ 0.28
KARS-201ENST00000302445 RIMS2Q9UQ26 1411 aa16.8■□□□□ 0.28
KARS-201ENST00000302445 MCCP23508 829 aa16.8■□□□□ 0.28
KARS-201ENST00000302445 NOLC1Q14978 699 aaKnown RBP eCLIP16.8■□□□□ 0.28
KARS-201ENST00000302445 TRHP20396 242 aaPredicted RBP16.79■□□□□ 0.28
KARS-201ENST00000302445 TSPYL6Q8N831 410 aa16.79■□□□□ 0.28
KARS-201ENST00000302445 KIF3AQ9Y496 699 aa16.79■□□□□ 0.28
KARS-201ENST00000302445 RGS12O14924 1447 aa16.79■□□□□ 0.28
KARS-201ENST00000302445 SRPK2P78362 688 aaKnown RBP16.79■□□□□ 0.28
KARS-201ENST00000302445 DNTTIP2Q5QJE6 756 aaKnown RBP16.79■□□□□ 0.28
KARS-201ENST00000302445 CFAP65Q6ZU64 1925 aaKnown RBP16.78■□□□□ 0.28
KARS-201ENST00000302445 CEP85Q6P2H3 762 aa16.78■□□□□ 0.28
KARS-201ENST00000302445 PTPRCP08575 1304 aa16.78■□□□□ 0.28
KARS-201ENST00000302445 YTHDC2Q9H6S0 1430 aaKnown RBP16.77■□□□□ 0.28
KARS-201ENST00000302445 WDR33Q9C0J8 1336 aaKnown RBP16.77■□□□□ 0.28
KARS-201ENST00000302445 ZNF710Q8N1W2 664 aa16.77■□□□□ 0.27
KARS-201ENST00000302445 RNF214Q8ND24 703 aa16.77■□□□□ 0.27
KARS-201ENST00000302445 DIAPH3Q9NSV4 1193 aa16.77■□□□□ 0.27
KARS-201ENST00000302445 HMMRO75330 724 aa16.76■□□□□ 0.27
KARS-201ENST00000302445 CCDC183Q5T5S1 534 aa16.76■□□□□ 0.27
KARS-201ENST00000302445 AATKQ6ZMQ8 1374 aa16.76■□□□□ 0.27
KARS-201ENST00000302445 KIAA0232Q92628 1395 aa16.75■□□□□ 0.27
KARS-201ENST00000302445 NEK4P51957 841 aa16.75■□□□□ 0.27
KARS-201ENST00000302445 C16orf71Q8IYS4 520 aaPredicted RBP16.74■□□□□ 0.27
KARS-201ENST00000302445 POLKQ9UBT6 870 aa16.74■□□□□ 0.27
KARS-201ENST00000302445 DLC1Q96QB1 1528 aa16.74■□□□□ 0.27
KARS-201ENST00000302445 NRKQ7Z2Y5 1582 aa16.74■□□□□ 0.27
KARS-201ENST00000302445 TAF3Q5VWG9 929 aa16.73■□□□□ 0.27
KARS-201ENST00000302445 C8orf58Q8NAV2 365 aa16.73■□□□□ 0.27
KARS-201ENST00000302445 POGZQ7Z3K3 1410 aa16.73■□□□□ 0.27
KARS-201ENST00000302445 PLEKHG5O94827 1062 aa16.72■□□□□ 0.27
KARS-201ENST00000302445 CHAF1AQ13111 956 aaPredicted RBP16.72■□□□□ 0.27
KARS-201ENST00000302445 SYCP1Q15431 976 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms