RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 SETD1AO15047 1707 aaKnown RBP16.88■□□□□ 0.29
CDH8-201ENST00000299345 SBNO1A3KN83 1393 aa16.88■□□□□ 0.29
CDH8-201ENST00000299345 DCTPP1Q9H773 170 aa16.88■□□□□ 0.29
CDH8-201ENST00000299345 OVOS2A0A0J9YW53 1432 aa16.88■□□□□ 0.29
CDH8-201ENST00000299345 OVOS2Q6IE36 1432 aa16.88■□□□□ 0.29
CDH8-201ENST00000299345 KCNA6P17658 529 aa16.87■□□□□ 0.29
CDH8-201ENST00000299345 ANKRD44Q8N8A2 993 aa16.87■□□□□ 0.29
CDH8-201ENST00000299345 KIAA0232Q92628 1395 aa16.87■□□□□ 0.29
CDH8-201ENST00000299345 FKBP5Q13451 457 aaPredicted RBP16.87■□□□□ 0.29
CDH8-201ENST00000299345 ANTXR1Q9H6X2 564 aa16.87■□□□□ 0.29
CDH8-201ENST00000299345 MEIS3Q99687 375 aa16.87■□□□□ 0.29
CDH8-201ENST00000299345 RBM25P49756 843 aaKnown RBP16.86■□□□□ 0.29
CDH8-201ENST00000299345 IL27Q8NEV9 243 aa16.86■□□□□ 0.29
CDH8-201ENST00000299345 F6X3S4 739 aa16.86■□□□□ 0.29
CDH8-201ENST00000299345 ARHGEF10O15013 1369 aa16.86■□□□□ 0.29
CDH8-201ENST00000299345 KIF24Q5T7B8 1368 aa16.86■□□□□ 0.29
CDH8-201ENST00000299345 CCT4P50991 539 aaKnown RBP16.86■□□□□ 0.29
CDH8-201ENST00000299345 PTPRUQ92729 1446 aa16.86■□□□□ 0.29
CDH8-201ENST00000299345 GNAT3A8MTJ3 354 aa16.85■□□□□ 0.29
CDH8-201ENST00000299345 FOXD4L1Q9NU39 408 aa16.85■□□□□ 0.29
CDH8-201ENST00000299345 ITSN1Q15811 1721 aa16.85■□□□□ 0.29
CDH8-201ENST00000299345 CCDC30Q5VVM6 783 aa16.85■□□□□ 0.29
CDH8-201ENST00000299345 GZF1Q9H116 711 aaPredicted RBP16.85■□□□□ 0.29
CDH8-201ENST00000299345 USP31Q70CQ4 1352 aa16.85■□□□□ 0.29
CDH8-201ENST00000299345 BRPF3Q9ULD4 1205 aa16.85■□□□□ 0.29
CDH8-201ENST00000299345 MCM4P33991 863 aa16.84■□□□□ 0.29
CDH8-201ENST00000299345 CEP85Q6P2H3 762 aa16.84■□□□□ 0.29
CDH8-201ENST00000299345 LMOD2Q6P5Q4 547 aa16.84■□□□□ 0.29
CDH8-201ENST00000299345 PLEKHM2Q8IWE5 1019 aa16.84■□□□□ 0.29
CDH8-201ENST00000299345 C16orf71Q8IYS4 520 aaPredicted RBP16.84■□□□□ 0.29
CDH8-201ENST00000299345 SMARCA5O60264 1052 aaPredicted RBP16.83■□□□□ 0.29
CDH8-201ENST00000299345 VIRMAQ69YN4 1812 aaKnown RBP16.83■□□□□ 0.28
CDH8-201ENST00000299345 PSME1Q06323 249 aa16.83■□□□□ 0.28
CDH8-201ENST00000299345 G2E3Q7L622 706 aa16.83■□□□□ 0.28
CDH8-201ENST00000299345 MSH6P52701 1360 aa16.82■□□□□ 0.28
CDH8-201ENST00000299345 KNDC1Q76NI1 1749 aa16.82■□□□□ 0.28
CDH8-201ENST00000299345 MON2Q7Z3U7 1717 aa16.82■□□□□ 0.28
CDH8-201ENST00000299345 UBR1Q8IWV7 1749 aa16.82■□□□□ 0.28
CDH8-201ENST00000299345 RBM33Q96EV2 1170 aaKnown RBP16.82■□□□□ 0.28
CDH8-201ENST00000299345 GNAI2P04899 355 aa16.82■□□□□ 0.28
CDH8-201ENST00000299345 HOXC9P31274 260 aa16.82■□□□□ 0.28
CDH8-201ENST00000299345 L1TD1Q5T7N2 865 aaKnown RBP16.82■□□□□ 0.28
CDH8-201ENST00000299345 PHF8Q9UPP1 1060 aa16.82■□□□□ 0.28
CDH8-201ENST00000299345 TTC22Q5TAA0 569 aa16.81■□□□□ 0.28
CDH8-201ENST00000299345 SNX21Q969T3 373 aa16.81■□□□□ 0.28
CDH8-201ENST00000299345 ANKLE2Q86XL3 938 aa16.81■□□□□ 0.28
CDH8-201ENST00000299345 IGSF1Q8N6C5 1336 aa16.81■□□□□ 0.28
CDH8-201ENST00000299345 GBP4Q96PP9 640 aa16.81■□□□□ 0.28
CDH8-201ENST00000299345 C3P01024 1663 aa16.81■□□□□ 0.28
CDH8-201ENST00000299345 HTATSF1O43719 755 aaKnown RBP16.8■□□□□ 0.28
CDH8-201ENST00000299345 GNAI3P08754 354 aa16.8■□□□□ 0.28
CDH8-201ENST00000299345 USHBP1Q8N6Y0 703 aa16.8■□□□□ 0.28
CDH8-201ENST00000299345 DDX11L8A8MPP1 907 aa16.8■□□□□ 0.28
CDH8-201ENST00000299345 ESCO1Q5FWF5 840 aa16.8■□□□□ 0.28
CDH8-201ENST00000299345 FLIIQ13045 1269 aa16.79■□□□□ 0.28
CDH8-201ENST00000299345 TAF7Q15545 349 aaPredicted RBP16.79■□□□□ 0.28
CDH8-201ENST00000299345 KIF13AQ9H1H9 1805 aa16.79■□□□□ 0.28
CDH8-201ENST00000299345 RTL1A6NKG5 1358 aa16.79■□□□□ 0.28
CDH8-201ENST00000299345 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.79■□□□□ 0.28
CDH8-201ENST00000299345 K7ELQ4 463 aaPredicted RBP16.79■□□□□ 0.28
CDH8-201ENST00000299345 OTUD7AQ8TE49 926 aaPredicted RBP16.79■□□□□ 0.28
CDH8-201ENST00000299345 GSPT1P15170 499 aaKnown RBP16.78■□□□□ 0.28
CDH8-201ENST00000299345 EIF2S2P20042 333 aaKnown RBP16.78■□□□□ 0.28
CDH8-201ENST00000299345 TRAK2O60296 914 aa16.78■□□□□ 0.28
CDH8-201ENST00000299345 HDGFL1Q5TGJ6 251 aa16.78■□□□□ 0.28
CDH8-201ENST00000299345 CRB1P82279 1406 aa16.77■□□□□ 0.28
CDH8-201ENST00000299345 REC8O95072 547 aa16.77■□□□□ 0.28
CDH8-201ENST00000299345 RBM42Q9BTD8 480 aaKnown RBP16.77■□□□□ 0.28
CDH8-201ENST00000299345 EXOC6BQ9Y2D4 811 aa16.77■□□□□ 0.28
CDH8-201ENST00000299345 AKAP12Q02952 1782 aa16.77■□□□□ 0.28
CDH8-201ENST00000299345 GOLGA6L22H0YM25 854 aa16.77■□□□□ 0.27
CDH8-201ENST00000299345 GOLGA6L3A6NEY3 463 aa16.77■□□□□ 0.27
CDH8-201ENST00000299345 TEFQ10587 303 aa16.76■□□□□ 0.27
CDH8-201ENST00000299345 RABEP1Q15276 862 aa16.76■□□□□ 0.27
CDH8-201ENST00000299345 CIZ1Q9ULV3 898 aaPredicted RBP16.76■□□□□ 0.27
CDH8-201ENST00000299345 SDSP20132 328 aa16.76■□□□□ 0.27
CDH8-201ENST00000299345 SSH2Q76I76 1423 aa16.76■□□□□ 0.27
CDH8-201ENST00000299345 TRIM6-TRIM34B2RNG4 842 aa16.75■□□□□ 0.27
CDH8-201ENST00000299345 CHMP4AQ9BY43 222 aa16.75■□□□□ 0.27
CDH8-201ENST00000299345 KDRP35968 1356 aa16.74■□□□□ 0.27
CDH8-201ENST00000299345 MAP3K5Q99683 1374 aa16.74■□□□□ 0.27
CDH8-201ENST00000299345 UBTFL1P0CB47 393 aaPredicted RBP16.74■□□□□ 0.27
CDH8-201ENST00000299345 ST18O60284 1047 aa16.74■□□□□ 0.27
CDH8-201ENST00000299345 IL17REQ8NFR9 667 aa16.74■□□□□ 0.27
CDH8-201ENST00000299345 LRRCC1Q9C099 1032 aa16.74■□□□□ 0.27
CDH8-201ENST00000299345 DLG5Q8TDM6 1919 aa16.73■□□□□ 0.27
CDH8-201ENST00000299345 RILPL2Q969X0 211 aa16.73■□□□□ 0.27
CDH8-201ENST00000299345 ANKARQ7Z5J8 1434 aa16.72■□□□□ 0.27
CDH8-201ENST00000299345 ARHGAP23Q9P227 1491 aa16.72■□□□□ 0.27
CDH8-201ENST00000299345 DIP2AQ14689 1571 aa16.72■□□□□ 0.27
CDH8-201ENST00000299345 KCNH5Q8NCM2 988 aa16.72■□□□□ 0.27
CDH8-201ENST00000299345 TNPO1Q92973 898 aaKnown RBP16.72■□□□□ 0.27
CDH8-201ENST00000299345 SLIT1O75093 1534 aa16.72■□□□□ 0.27
CDH8-201ENST00000299345 ERC2O15083 957 aa16.71■□□□□ 0.27
CDH8-201ENST00000299345 NRKQ7Z2Y5 1582 aa16.71■□□□□ 0.27
CDH8-201ENST00000299345 LRRFIP2Q9Y608 721 aaKnown RBP16.71■□□□□ 0.27
CDH8-201ENST00000299345 ATP10DQ9P241 1426 aa16.71■□□□□ 0.27
CDH8-201ENST00000299345 PDE1AP54750 535 aa16.71■□□□□ 0.27
CDH8-201ENST00000299345 ZNF530Q6P9A1 599 aaPredicted RBP16.71■□□□□ 0.27
CDH8-201ENST00000299345 IP6K1Q92551 441 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms