RNA–Protein interactions for RNA: ENST00000297268.10

COL1A2-201, Transcript of collagen type I alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A2, Length 5,411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-201ENST00000297268 ZNHIT6Q9NWK9 470 aaKnown RBP16.75■□□□□ 0.27
COL1A2-201ENST00000297268 MAP3K1Q13233 1512 aa16.75■□□□□ 0.27
COL1A2-201ENST00000297268 TTC39AQ5SRH9 613 aa16.75■□□□□ 0.27
COL1A2-201ENST00000297268 MTMR7Q9Y216 660 aa16.75■□□□□ 0.27
COL1A2-201ENST00000297268 TRIM27P14373 513 aa16.75■□□□□ 0.27
COL1A2-201ENST00000297268 CT47A1Q5JQC4 288 aaPredicted RBP16.75■□□□□ 0.27
COL1A2-201ENST00000297268 CCDC191Q8NCU4 936 aa16.75■□□□□ 0.27
COL1A2-201ENST00000297268 CDK13Q14004 1512 aaKnown RBP16.74■□□□□ 0.27
COL1A2-201ENST00000297268 RRS1Q15050 365 aaKnown RBP16.74■□□□□ 0.27
COL1A2-201ENST00000297268 CCDC158Q5M9N0 1113 aa16.74■□□□□ 0.27
COL1A2-201ENST00000297268 CLCN1P35523 988 aa16.74■□□□□ 0.27
COL1A2-201ENST00000297268 PTPN23Q9H3S7 1636 aa16.74■□□□□ 0.27
COL1A2-201ENST00000297268 XRCC6P12956 609 aaKnown RBP eCLIP16.74■□□□□ 0.27
COL1A2-201ENST00000297268 SMTNL1A8MU46 457 aa16.74■□□□□ 0.27
COL1A2-201ENST00000297268 KRT32Q14532 448 aa16.74■□□□□ 0.27
COL1A2-201ENST00000297268 TXNDC2Q86VQ3 553 aa16.74■□□□□ 0.27
COL1A2-201ENST00000297268 STK11IPQ8N1F8 1099 aa16.74■□□□□ 0.27
COL1A2-201ENST00000297268 DDX11Q96FC9 970 aa16.74■□□□□ 0.27
COL1A2-201ENST00000297268 MCM5P33992 734 aa16.73■□□□□ 0.27
COL1A2-201ENST00000297268 KLHL40Q2TBA0 621 aa16.73■□□□□ 0.27
COL1A2-201ENST00000297268 TMCO3Q6UWJ1 677 aa16.73■□□□□ 0.27
COL1A2-201ENST00000297268 TBC1D9Q6ZT07 1266 aa16.73■□□□□ 0.27
COL1A2-201ENST00000297268 EPRSP07814 1512 aaKnown RBP16.73■□□□□ 0.27
COL1A2-201ENST00000297268 KIF2AO00139 706 aaPredicted RBP16.73■□□□□ 0.27
COL1A2-201ENST00000297268 ZNF692Q9BU19 519 aaPredicted RBP16.73■□□□□ 0.27
COL1A2-201ENST00000297268 PLEKHH1Q9ULM0 1364 aa16.73■□□□□ 0.27
COL1A2-201ENST00000297268 MYO6Q9UM54 1294 aa16.72■□□□□ 0.27
COL1A2-201ENST00000297268 ATAD2Q6PL18 1390 aa16.72■□□□□ 0.27
COL1A2-201ENST00000297268 BMP2KLQ5H9B9 411 aa16.72■□□□□ 0.27
COL1A2-201ENST00000297268 TRIM22Q8IYM9 498 aa16.72■□□□□ 0.27
COL1A2-201ENST00000297268 RBM27Q9P2N5 1060 aaKnown RBP16.72■□□□□ 0.27
COL1A2-201ENST00000297268 MRC2Q9UBG0 1479 aa16.72■□□□□ 0.27
COL1A2-201ENST00000297268 ABCC11Q96J66 1382 aa16.72■□□□□ 0.27
COL1A2-201ENST00000297268 KIAA0754O94854 1291 aa16.71■□□□□ 0.27
COL1A2-201ENST00000297268 PRPF40BQ6NWY9 871 aaKnown RBP16.71■□□□□ 0.27
COL1A2-201ENST00000297268 HSP90AB2PQ58FF8 381 aa16.71■□□□□ 0.27
COL1A2-201ENST00000297268 SFPQP23246 707 aaKnown RBP eCLIP16.71■□□□□ 0.27
COL1A2-201ENST00000297268 KIF18AQ8NI77 898 aa16.71■□□□□ 0.27
COL1A2-201ENST00000297268 CCDC102AQ96A19 550 aa16.71■□□□□ 0.27
COL1A2-201ENST00000297268 GDPD2Q9HCC8 539 aa16.71■□□□□ 0.27
COL1A2-201ENST00000297268 RPRD2Q5VT52 1461 aaKnown RBP16.71■□□□□ 0.27
COL1A2-201ENST00000297268 CFAP100Q494V2 611 aa16.71■□□□□ 0.26
COL1A2-201ENST00000297268 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.71■□□□□ 0.26
COL1A2-201ENST00000297268 SCAND2PQ9GZW5 306 aaPredicted RBP16.71■□□□□ 0.26
COL1A2-201ENST00000297268 CLIP2Q9UDT6 1046 aa16.7■□□□□ 0.26
COL1A2-201ENST00000297268 TNNT1P13805 278 aa16.7■□□□□ 0.26
COL1A2-201ENST00000297268 PANK2Q9BZ23 570 aa16.7■□□□□ 0.26
COL1A2-201ENST00000297268 CGNQ9P2M7 1197 aaKnown RBP16.7■□□□□ 0.26
COL1A2-201ENST00000297268 ZSCAN23Q3MJ62 389 aa16.7■□□□□ 0.26
COL1A2-201ENST00000297268 C8orf34Q49A92 452 aa16.7■□□□□ 0.26
COL1A2-201ENST00000297268 CCDC181Q5TID7 509 aa16.7■□□□□ 0.26
COL1A2-201ENST00000297268 ADCY5O95622 1261 aa16.7■□□□□ 0.26
COL1A2-201ENST00000297268 CCDC43Q96MW1 224 aaKnown RBP16.7■□□□□ 0.26
COL1A2-201ENST00000297268 ZMYND15Q9H091 742 aa16.7■□□□□ 0.26
COL1A2-201ENST00000297268 DNMBPQ6XZF7 1577 aa16.7■□□□□ 0.26
COL1A2-201ENST00000297268 RTEL1-TNFRSF6BF6WH68 1400 aa16.69■□□□□ 0.26
COL1A2-201ENST00000297268 ABCC5O15440 1437 aa16.69■□□□□ 0.26
COL1A2-201ENST00000297268 DYNC1I1O14576 645 aa16.69■□□□□ 0.26
COL1A2-201ENST00000297268 MAPK8IP2Q13387 824 aaPredicted RBP16.69■□□□□ 0.26
COL1A2-201ENST00000297268 FAM193AP78312 1265 aa16.69■□□□□ 0.26
COL1A2-201ENST00000297268 PPP4R3BQ5MIZ7 849 aa16.69■□□□□ 0.26
COL1A2-201ENST00000297268 C16orf45Q96MC5 204 aaPredicted RBP16.69■□□□□ 0.26
COL1A2-201ENST00000297268 IFT140Q96RY7 1462 aa16.69■□□□□ 0.26
COL1A2-201ENST00000297268 GOLGA6L10A6NI86 522 aa16.69■□□□□ 0.26
COL1A2-201ENST00000297268 KIF1BPQ96EK5 621 aa16.69■□□□□ 0.26
COL1A2-201ENST00000297268 CDK5RAP3Q96JB5 506 aa16.69■□□□□ 0.26
COL1A2-201ENST00000297268 MIS18AQ9NYP9 233 aa16.69■□□□□ 0.26
COL1A2-201ENST00000297268 CCDC69A6NI79 296 aa16.68■□□□□ 0.26
COL1A2-201ENST00000297268 ANO10Q9NW15 660 aa16.68■□□□□ 0.26
COL1A2-201ENST00000297268 DEF6Q9H4E7 631 aa16.68■□□□□ 0.26
COL1A2-201ENST00000297268 SH2B1Q9NRF2 756 aaPredicted RBP16.68■□□□□ 0.26
COL1A2-201ENST00000297268 CKAP2LQ8IYA6 745 aa16.68■□□□□ 0.26
COL1A2-201ENST00000297268 GLRX3O76003 335 aaKnown RBP16.68■□□□□ 0.26
COL1A2-201ENST00000297268 CDKL5O76039 1030 aa16.67■□□□□ 0.26
COL1A2-201ENST00000297268 MCM10Q7L590 875 aa16.67■□□□□ 0.26
COL1A2-201ENST00000297268 DDX54Q8TDD1 881 aaKnown RBP16.67■□□□□ 0.26
COL1A2-201ENST00000297268 RPGRIP1LQ68CZ1 1315 aa16.67■□□□□ 0.26
COL1A2-201ENST00000297268 DHX29Q7Z478 1369 aaKnown RBP16.67■□□□□ 0.26
COL1A2-201ENST00000297268 MAPKBP1O60336 1514 aa16.67■□□□□ 0.26
COL1A2-201ENST00000297268 RAB11FIP3O75154 756 aa16.67■□□□□ 0.26
COL1A2-201ENST00000297268 STIM1Q13586 685 aa16.67■□□□□ 0.26
COL1A2-201ENST00000297268 ZNF530Q6P9A1 599 aaPredicted RBP16.67■□□□□ 0.26
COL1A2-201ENST00000297268 ODF2Q5BJF6 829 aa16.67■□□□□ 0.26
COL1A2-201ENST00000297268 LIMCH1Q9UPQ0 1083 aa16.67■□□□□ 0.26
COL1A2-201ENST00000297268 CNNM1Q9NRU3 951 aa16.67■□□□□ 0.26
COL1A2-201ENST00000297268 ZHX1Q9UKY1 873 aaPredicted RBP16.67■□□□□ 0.26
COL1A2-201ENST00000297268 FKBP4Q02790 459 aaKnown RBP eCLIP16.66■□□□□ 0.26
COL1A2-201ENST00000297268 ARHGAP29Q52LW3 1261 aa16.66■□□□□ 0.26
COL1A2-201ENST00000297268 MYL6BP14649 208 aa16.66■□□□□ 0.26
COL1A2-201ENST00000297268 EPB41L2O43491 1005 aaKnown RBP16.66■□□□□ 0.26
COL1A2-201ENST00000297268 HSP90AB3PQ58FF7 597 aa16.66■□□□□ 0.26
COL1A2-201ENST00000297268 CTNNA3Q9UI47 895 aa16.66■□□□□ 0.26
COL1A2-201ENST00000297268 CALRP27797 417 aaKnown RBP16.66■□□□□ 0.26
COL1A2-201ENST00000297268 ZSCAN12O43309 604 aa16.65■□□□□ 0.26
COL1A2-201ENST00000297268 NUP133Q8WUM0 1156 aa16.65■□□□□ 0.26
COL1A2-201ENST00000297268 RBM33Q96EV2 1170 aaKnown RBP16.65■□□□□ 0.26
COL1A2-201ENST00000297268 CAMSAP2Q08AD1 1489 aa16.65■□□□□ 0.26
COL1A2-201ENST00000297268 URI1O94763 535 aaPredicted RBP16.65■□□□□ 0.26
COL1A2-201ENST00000297268 CTDP1Q9Y5B0 961 aaPredicted RBP16.65■□□□□ 0.26
COL1A2-201ENST00000297268 PEG3Q9GZU2 1588 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms