RNA–Protein interactions for RNA: ENST00000296254.3

TMEM41A-201, Transcript of transmembrane protein 41A, humanhuman

TSL 2 BASIC

Gene TMEM41A, Length 1,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-201ENST00000296254 LY75O60449 1722 aa22.45■■□□□ 1.19
TMEM41A-201ENST00000296254 USP47Q96K76 1375 aa22.45■■□□□ 1.18
TMEM41A-201ENST00000296254 TUBGCP6Q96RT7 1819 aa22.45■■□□□ 1.18
TMEM41A-201ENST00000296254 COL24A1Q17RW2 1714 aa22.44■■□□□ 1.18
TMEM41A-201ENST00000296254 SYTL4Q96C24 671 aaPredicted RBP22.44■■□□□ 1.18
TMEM41A-201ENST00000296254 PNPLA7Q6ZV29 1317 aa22.43■■□□□ 1.18
TMEM41A-201ENST00000296254 PRIM1P49642 420 aaKnown RBP22.43■■□□□ 1.18
TMEM41A-201ENST00000296254 RRS1Q15050 365 aaKnown RBP22.43■■□□□ 1.18
TMEM41A-201ENST00000296254 ZCRB1Q8TBF4 217 aaKnown RBP22.43■■□□□ 1.18
TMEM41A-201ENST00000296254 SLC16A10Q8TF71 515 aa22.43■■□□□ 1.18
TMEM41A-201ENST00000296254 SMG6Q86US8 1419 aaKnown RBP22.42■■□□□ 1.18
TMEM41A-201ENST00000296254 FYB1O15117 783 aa22.41■■□□□ 1.18
TMEM41A-201ENST00000296254 TMF1P82094 1093 aa22.41■■□□□ 1.18
TMEM41A-201ENST00000296254 CGNL1Q0VF96 1302 aa22.4■■□□□ 1.18
TMEM41A-201ENST00000296254 NBPF6Q5VWK0 638 aa22.4■■□□□ 1.18
TMEM41A-201ENST00000296254 ZNF784Q8NCA9 323 aaPredicted RBP22.4■■□□□ 1.18
TMEM41A-201ENST00000296254 NBPF4Q96M43 638 aa22.4■■□□□ 1.18
TMEM41A-201ENST00000296254 GGNBP2Q9H3C7 697 aa22.4■■□□□ 1.18
TMEM41A-201ENST00000296254 KIF20BQ96Q89 1820 aa22.4■■□□□ 1.18
TMEM41A-201ENST00000296254 KCNQ4P56696 695 aa22.39■■□□□ 1.17
TMEM41A-201ENST00000296254 CHD4Q14839 1912 aa22.38■■□□□ 1.17
TMEM41A-201ENST00000296254 TFCP2L1Q9NZI6 479 aa22.38■■□□□ 1.17
TMEM41A-201ENST00000296254 POLD1P28340 1107 aa22.37■■□□□ 1.17
TMEM41A-201ENST00000296254 USHBP1Q8N6Y0 703 aa22.37■■□□□ 1.17
TMEM41A-201ENST00000296254 INSRP06213 1382 aa22.37■■□□□ 1.17
TMEM41A-201ENST00000296254 FLT4P35916 1363 aa22.37■■□□□ 1.17
TMEM41A-201ENST00000296254 KIF24Q5T7B8 1368 aa22.37■■□□□ 1.17
TMEM41A-201ENST00000296254 RAPGEF4Q8WZA2 1011 aa22.36■■□□□ 1.17
TMEM41A-201ENST00000296254 CCNL1Q9UK58 526 aaPredicted RBP22.36■■□□□ 1.17
TMEM41A-201ENST00000296254 PCDH11XQ9BZA7 1347 aa22.33■■□□□ 1.17
TMEM41A-201ENST00000296254 PCDH11YQ9BZA8 1340 aa22.33■■□□□ 1.17
TMEM41A-201ENST00000296254 CDCA8Q53HL2 280 aa22.33■■□□□ 1.17
TMEM41A-201ENST00000296254 HSP90AB2PQ58FF8 381 aa22.33■■□□□ 1.17
TMEM41A-201ENST00000296254 TATP17735 454 aaPredicted RBP22.32■■□□□ 1.16
TMEM41A-201ENST00000296254 KLHL34Q8N239 644 aa22.32■■□□□ 1.16
TMEM41A-201ENST00000296254 C5P01031 1676 aa22.32■■□□□ 1.16
TMEM41A-201ENST00000296254 NSD3Q9BZ95 1437 aa22.31■■□□□ 1.16
TMEM41A-201ENST00000296254 GPR162Q16538 588 aa22.3■■□□□ 1.16
TMEM41A-201ENST00000296254 PKD1L3Q7Z443 1732 aa22.3■■□□□ 1.16
TMEM41A-201ENST00000296254 TOGARAM1Q9Y4F4 1720 aa22.3■■□□□ 1.16
TMEM41A-201ENST00000296254 NCAPD2Q15021 1401 aa22.3■■□□□ 1.16
TMEM41A-201ENST00000296254 ANKRD26Q9UPS8 1709 aa22.29■■□□□ 1.16
TMEM41A-201ENST00000296254 PALLDQ8WX93 1383 aa22.28■■□□□ 1.16
TMEM41A-201ENST00000296254 NLGN2Q8NFZ4 835 aa22.28■■□□□ 1.16
TMEM41A-201ENST00000296254 COL23A1Q86Y22 540 aaPredicted RBP22.27■■□□□ 1.16
TMEM41A-201ENST00000296254 CARD14Q9BXL6 1004 aa22.27■■□□□ 1.16
TMEM41A-201ENST00000296254 CYP27B1O15528 508 aa22.26■■□□□ 1.15
TMEM41A-201ENST00000296254 EMILIN1Q9Y6C2 1016 aa22.26■■□□□ 1.15
TMEM41A-201ENST00000296254 TAF1LQ8IZX4 1826 aa22.25■■□□□ 1.15
TMEM41A-201ENST00000296254 MSH5O43196 834 aa22.24■■□□□ 1.15
TMEM41A-201ENST00000296254 TRIM26Q12899 539 aaPredicted RBP22.24■■□□□ 1.15
TMEM41A-201ENST00000296254 PELP1Q8IZL8 1130 aaKnown RBP22.23■■□□□ 1.15
TMEM41A-201ENST00000296254 ITGB4P16144 1822 aa22.22■■□□□ 1.15
TMEM41A-201ENST00000296254 MSL1Q68DK7 614 aa22.22■■□□□ 1.15
TMEM41A-201ENST00000296254 MPRIPQ6WCQ1 1025 aa22.22■■□□□ 1.15
TMEM41A-201ENST00000296254 C4BP0C0L5 1744 aa22.22■■□□□ 1.15
TMEM41A-201ENST00000296254 HMGB2P26583 209 aaKnown RBP22.21■■□□□ 1.15
TMEM41A-201ENST00000296254 FLAD1Q8NFF5 587 aa22.2■■□□□ 1.14
TMEM41A-201ENST00000296254 YBX3P16989 372 aaKnown RBP eCLIP22.19■■□□□ 1.14
TMEM41A-201ENST00000296254 C1QTNF8P60827 252 aa22.19■■□□□ 1.14
TMEM41A-201ENST00000296254 SMARCC1Q92922 1105 aaPredicted RBP22.19■■□□□ 1.14
TMEM41A-201ENST00000296254 WASHC2AQ641Q2 1341 aa22.18■■□□□ 1.14
TMEM41A-201ENST00000296254 PPM1GO15355 546 aaPredicted RBP22.18■■□□□ 1.14
TMEM41A-201ENST00000296254 NKX1-1Q15270 411 aaPredicted RBP22.18■■□□□ 1.14
TMEM41A-201ENST00000296254 MAP2P11137 1827 aaKnown RBP22.17■■□□□ 1.14
TMEM41A-201ENST00000296254 UBR3Q6ZT12 1888 aa22.16■■□□□ 1.14
TMEM41A-201ENST00000296254 GRIN3BO60391 1043 aa22.16■■□□□ 1.14
TMEM41A-201ENST00000296254 PIGBQ92521 554 aa22.16■■□□□ 1.14
TMEM41A-201ENST00000296254 TIMELESSQ9UNS1 1208 aa22.16■■□□□ 1.14
TMEM41A-201ENST00000296254 SPG7Q9UQ90 795 aa22.16■■□□□ 1.14
TMEM41A-201ENST00000296254 AMIGO3Q86WK7 504 aa22.15■■□□□ 1.14
TMEM41A-201ENST00000296254 AK7Q96M32 723 aa22.15■■□□□ 1.14
TMEM41A-201ENST00000296254 SENP3-EIF4A1A0A087X0R7 540 aa22.14■■□□□ 1.13
TMEM41A-201ENST00000296254 EYA1Q99502 592 aa22.14■■□□□ 1.13
TMEM41A-201ENST00000296254 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.14■■□□□ 1.13
TMEM41A-201ENST00000296254 CD2APQ9Y5K6 639 aa22.14■■□□□ 1.13
TMEM41A-201ENST00000296254 PLEKHG2Q9H7P9 1386 aa22.12■■□□□ 1.13
TMEM41A-201ENST00000296254 GIGYF1O75420 1035 aaPredicted RBP22.12■■□□□ 1.13
TMEM41A-201ENST00000296254 POLKQ9UBT6 870 aa22.12■■□□□ 1.13
TMEM41A-201ENST00000296254 CEP350Q5VT06 3117 aa22.12■■□□□ 1.13
TMEM41A-201ENST00000296254 LOC102724428A0A0B4J2F2 783 aa22.11■■□□□ 1.13
TMEM41A-201ENST00000296254 SIK1P57059 783 aa22.11■■□□□ 1.13
TMEM41A-201ENST00000296254 CLSPNQ9HAW4 1339 aa22.1■■□□□ 1.13
TMEM41A-201ENST00000296254 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.1■■□□□ 1.13
TMEM41A-201ENST00000296254 PHF14O94880 888 aa22.1■■□□□ 1.13
TMEM41A-201ENST00000296254 SSFA2P28290 1259 aa22.1■■□□□ 1.13
TMEM41A-201ENST00000296254 TMOD3Q9NYL9 352 aa22.1■■□□□ 1.13
TMEM41A-201ENST00000296254 PHKG2P15735 406 aa22.09■■□□□ 1.13
TMEM41A-201ENST00000296254 LINC00116Q8NCU8 138 aa22.09■■□□□ 1.13
TMEM41A-201ENST00000296254 IFNL2Q8IZJ0 200 aa22.08■■□□□ 1.13
TMEM41A-201ENST00000296254 EIF4A2Q14240 407 aaKnown RBP22.07■■□□□ 1.12
TMEM41A-201ENST00000296254 SMIM5Q71RC9 77 aa22.07■■□□□ 1.12
TMEM41A-201ENST00000296254 ASAP1Q9ULH1 1129 aa22.07■■□□□ 1.12
TMEM41A-201ENST00000296254 ATP10DQ9P241 1426 aa22.06■■□□□ 1.12
TMEM41A-201ENST00000296254 ITPK1Q13572 414 aa22.06■■□□□ 1.12
TMEM41A-201ENST00000296254 KDRP35968 1356 aa22.06■■□□□ 1.12
TMEM41A-201ENST00000296254 IGSF1Q8N6C5 1336 aa22.06■■□□□ 1.12
TMEM41A-201ENST00000296254 ADCY9O60503 1353 aa22.05■■□□□ 1.12
TMEM41A-201ENST00000296254 GNPATO15228 680 aa22.04■■□□□ 1.12
TMEM41A-201ENST00000296254 TNNT2P45379 298 aaPredicted RBP22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms