RNA–Protein interactions for RNA: ENST00000295688.7

CCT3-201, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT3, Length 2,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-201ENST00000295688 ANP32BQ92688 251 aaKnown RBP18.28■□□□□ 0.52
CCT3-201ENST00000295688 ZRANB1Q9UGI0 708 aa18.28■□□□□ 0.52
CCT3-201ENST00000295688 TECPR2O15040 1411 aa18.27■□□□□ 0.52
CCT3-201ENST00000295688 RRS1Q15050 365 aaKnown RBP18.27■□□□□ 0.52
CCT3-201ENST00000295688 NRXN3Q9Y4C0 1643 aa18.27■□□□□ 0.52
CCT3-201ENST00000295688 ATP10DQ9P241 1426 aa18.27■□□□□ 0.52
CCT3-201ENST00000295688 CCDC173Q0VFZ6 552 aa18.27■□□□□ 0.51
CCT3-201ENST00000295688 GAS2L3Q86XJ1 694 aa18.27■□□□□ 0.51
CCT3-201ENST00000295688 ST18O60284 1047 aa18.26■□□□□ 0.51
CCT3-201ENST00000295688 HMMRO75330 724 aa18.26■□□□□ 0.51
CCT3-201ENST00000295688 REC8O95072 547 aa18.26■□□□□ 0.51
CCT3-201ENST00000295688 CEP85Q6P2H3 762 aa18.26■□□□□ 0.51
CCT3-201ENST00000295688 NAP1L5Q96NT1 182 aaPredicted RBP18.26■□□□□ 0.51
CCT3-201ENST00000295688 DDX49Q9Y6V7 483 aaKnown RBP18.26■□□□□ 0.51
CCT3-201ENST00000295688 DCTN1Q14203 1278 aa18.25■□□□□ 0.51
CCT3-201ENST00000295688 RRP9O43818 475 aaKnown RBP18.25■□□□□ 0.51
CCT3-201ENST00000295688 RGS12O14924 1447 aa18.25■□□□□ 0.51
CCT3-201ENST00000295688 RTL1A6NKG5 1358 aa18.24■□□□□ 0.51
CCT3-201ENST00000295688 ERBB4Q15303 1308 aa18.24■□□□□ 0.51
CCT3-201ENST00000295688 SULT6B1Q6IMI4 303 aa18.24■□□□□ 0.51
CCT3-201ENST00000295688 TXNDC2Q86VQ3 553 aa18.24■□□□□ 0.51
CCT3-201ENST00000295688 METP08581 1390 aa18.23■□□□□ 0.51
CCT3-201ENST00000295688 EIF4A2Q14240 407 aaKnown RBP18.23■□□□□ 0.51
CCT3-201ENST00000295688 PPP1R9BQ96SB3 815 aa18.23■□□□□ 0.51
CCT3-201ENST00000295688 CYP2E1P05181 493 aaPredicted RBP18.23■□□□□ 0.51
CCT3-201ENST00000295688 SDSP20132 328 aa18.23■□□□□ 0.51
CCT3-201ENST00000295688 C16orf71Q8IYS4 520 aaPredicted RBP18.23■□□□□ 0.51
CCT3-201ENST00000295688 NASPP49321 788 aaPredicted RBP18.21■□□□□ 0.51
CCT3-201ENST00000295688 ZNF445P59923 1031 aa18.21■□□□□ 0.51
CCT3-201ENST00000295688 MSH6P52701 1360 aa18.21■□□□□ 0.51
CCT3-201ENST00000295688 OSBPL3Q9H4L5 887 aa18.21■□□□□ 0.51
CCT3-201ENST00000295688 TTC21BQ7Z4L5 1316 aa18.2■□□□□ 0.5
CCT3-201ENST00000295688 ERC2O15083 957 aa18.2■□□□□ 0.5
CCT3-201ENST00000295688 CCT4P50991 539 aaKnown RBP18.2■□□□□ 0.5
CCT3-201ENST00000295688 MCTP1Q6DN14 999 aa18.19■□□□□ 0.5
CCT3-201ENST00000295688 GLIPR1L2Q4G1C9 344 aa18.18■□□□□ 0.5
CCT3-201ENST00000295688 AEBP1Q8IUX7 1158 aa18.18■□□□□ 0.5
CCT3-201ENST00000295688 AK9Q5TCS8 1911 aa18.18■□□□□ 0.5
CCT3-201ENST00000295688 MEIS3Q99687 375 aa18.18■□□□□ 0.5
CCT3-201ENST00000295688 SLC4A2P04920 1241 aa18.17■□□□□ 0.5
CCT3-201ENST00000295688 MCM2P49736 904 aa18.17■□□□□ 0.5
CCT3-201ENST00000295688 LMBRD1Q9NUN5 540 aa18.17■□□□□ 0.5
CCT3-201ENST00000295688 RGPD1P0DJD0 1748 aa18.17■□□□□ 0.5
CCT3-201ENST00000295688 OVOS2A0A0J9YW53 1432 aa18.17■□□□□ 0.5
CCT3-201ENST00000295688 CRB1P82279 1406 aa18.17■□□□□ 0.5
CCT3-201ENST00000295688 OVOS2Q6IE36 1432 aa18.17■□□□□ 0.5
CCT3-201ENST00000295688 MCM10Q7L590 875 aa18.17■□□□□ 0.5
CCT3-201ENST00000295688 OTUD7AQ8TE49 926 aaPredicted RBP18.17■□□□□ 0.5
CCT3-201ENST00000295688 PRR36Q9H6K5 1346 aa18.16■□□□□ 0.5
CCT3-201ENST00000295688 NCKAP5LQ9HCH0 1330 aa18.16■□□□□ 0.5
CCT3-201ENST00000295688 PLEKHG3A1L390 1219 aa18.16■□□□□ 0.5
CCT3-201ENST00000295688 SMARCA5O60264 1052 aaPredicted RBP18.16■□□□□ 0.5
CCT3-201ENST00000295688 TPM2P07951 284 aa18.16■□□□□ 0.5
CCT3-201ENST00000295688 ARHGEF10O15013 1369 aa18.16■□□□□ 0.5
CCT3-201ENST00000295688 FAM69CQ0P6D2 419 aa18.15■□□□□ 0.5
CCT3-201ENST00000295688 KRT24Q2M2I5 525 aa18.15■□□□□ 0.5
CCT3-201ENST00000295688 NALCNQ8IZF0 1738 aa18.15■□□□□ 0.5
CCT3-201ENST00000295688 HS1BP3Q53T59 392 aa18.15■□□□□ 0.5
CCT3-201ENST00000295688 RTF1Q92541 710 aaKnown RBP18.15■□□□□ 0.5
CCT3-201ENST00000295688 ESF1Q9H501 851 aaKnown RBP18.15■□□□□ 0.5
CCT3-201ENST00000295688 USP31Q70CQ4 1352 aa18.14■□□□□ 0.5
CCT3-201ENST00000295688 ZSCAN30Q86W11 494 aa18.14■□□□□ 0.49
CCT3-201ENST00000295688 TOPAZ1Q8N9V7 1692 aa18.14■□□□□ 0.49
CCT3-201ENST00000295688 GNAI2P04899 355 aa18.14■□□□□ 0.49
CCT3-201ENST00000295688 MCCP23508 829 aa18.14■□□□□ 0.49
CCT3-201ENST00000295688 PDE1AP54750 535 aa18.14■□□□□ 0.49
CCT3-201ENST00000295688 HSP90AA2PQ14568 343 aaPredicted RBP18.14■□□□□ 0.49
CCT3-201ENST00000295688 DIP2BQ9P265 1576 aa18.13■□□□□ 0.49
CCT3-201ENST00000295688 APBB1O00213 710 aa18.13■□□□□ 0.49
CCT3-201ENST00000295688 NCLP19338 710 aaKnown RBP18.13■□□□□ 0.49
CCT3-201ENST00000295688 ZSCAN23Q3MJ62 389 aa18.13■□□□□ 0.49
CCT3-201ENST00000295688 ACEP12821 1306 aa18.13■□□□□ 0.49
CCT3-201ENST00000295688 CAVIN1Q6NZI2 390 aaKnown RBP18.13■□□□□ 0.49
CCT3-201ENST00000295688 USP6P35125 1406 aa18.12■□□□□ 0.49
CCT3-201ENST00000295688 TSPYL4Q9UJ04 414 aa18.12■□□□□ 0.49
CCT3-201ENST00000295688 GNAI3P08754 354 aa18.11■□□□□ 0.49
CCT3-201ENST00000295688 TERF1P54274 439 aa18.11■□□□□ 0.49
CCT3-201ENST00000295688 STK31Q9BXU1 1019 aa18.11■□□□□ 0.49
CCT3-201ENST00000295688 PEAK1Q9H792 1746 aa18.11■□□□□ 0.49
CCT3-201ENST00000295688 HTATSF1O43719 755 aaKnown RBP18.11■□□□□ 0.49
CCT3-201ENST00000295688 ANAPC15P60006 121 aa18.11■□□□□ 0.49
CCT3-201ENST00000295688 HSP90AB2PQ58FF8 381 aa18.11■□□□□ 0.49
CCT3-201ENST00000295688 MSNP26038 577 aaKnown RBP18.1■□□□□ 0.49
CCT3-201ENST00000295688 MLECQ14165 292 aa18.1■□□□□ 0.49
CCT3-201ENST00000295688 SOS1Q07889 1333 aaPredicted RBP18.1■□□□□ 0.49
CCT3-201ENST00000295688 TTC21AQ8NDW8 1320 aa18.1■□□□□ 0.49
CCT3-201ENST00000295688 PRPF40AO75400 957 aaKnown RBP18.1■□□□□ 0.49
CCT3-201ENST00000295688 SLC4A10Q6U841 1118 aa18.1■□□□□ 0.49
CCT3-201ENST00000295688 SRCIN1Q9C0H9 1055 aa18.1■□□□□ 0.49
CCT3-201ENST00000295688 TSPOAP1O95153 1857 aa18.09■□□□□ 0.49
CCT3-201ENST00000295688 EPB41L2O43491 1005 aaKnown RBP18.09■□□□□ 0.49
CCT3-201ENST00000295688 MBD3O95983 291 aa18.09■□□□□ 0.49
CCT3-201ENST00000295688 ZGPATQ8N5A5 531 aaKnown RBP18.09■□□□□ 0.49
CCT3-201ENST00000295688 LRRCC1Q9C099 1032 aa18.09■□□□□ 0.49
CCT3-201ENST00000295688 FMN2Q9NZ56 1722 aa18.09■□□□□ 0.49
CCT3-201ENST00000295688 CACNA1FO60840 1977 aa18.09■□□□□ 0.49
CCT3-201ENST00000295688 SSH2Q76I76 1423 aa18.08■□□□□ 0.49
CCT3-201ENST00000295688 ROBO2Q9HCK4 1378 aa18.08■□□□□ 0.49
CCT3-201ENST00000295688 TMEM2Q9UHN6 1383 aa18.08■□□□□ 0.48
CCT3-201ENST00000295688 NEK4P51957 841 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms