RNA–Protein interactions for RNA: ENST00000292808.5

ABCF3-201, Transcript of ATP binding cassette subfamily F member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene ABCF3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-201ENST00000292808 USHBP1Q8N6Y0 703 aa17.98■□□□□ 0.47
ABCF3-201ENST00000292808 CHL1O00533 1208 aa17.98■□□□□ 0.47
ABCF3-201ENST00000292808 CADPS2Q86UW7 1296 aa17.98■□□□□ 0.47
ABCF3-201ENST00000292808 PXDNQ92626 1479 aa17.98■□□□□ 0.47
ABCF3-201ENST00000292808 BRPF1P55201 1214 aaPredicted RBP17.97■□□□□ 0.47
ABCF3-201ENST00000292808 NBPF6Q5VWK0 638 aa17.97■□□□□ 0.47
ABCF3-201ENST00000292808 LMOD2Q6P5Q4 547 aa17.97■□□□□ 0.47
ABCF3-201ENST00000292808 DZIP1LQ8IYY4 767 aaKnown RBP17.97■□□□□ 0.47
ABCF3-201ENST00000292808 ZNF428Q96B54 188 aa17.97■□□□□ 0.47
ABCF3-201ENST00000292808 NBPF4Q96M43 638 aa17.97■□□□□ 0.47
ABCF3-201ENST00000292808 CAMTA1Q9Y6Y1 1673 aa17.97■□□□□ 0.47
ABCF3-201ENST00000292808 ZNF335Q9H4Z2 1342 aaPredicted RBP17.97■□□□□ 0.47
ABCF3-201ENST00000292808 RGPD5Q99666 1765 aa17.97■□□□□ 0.47
ABCF3-201ENST00000292808 PLEKHG5O94827 1062 aa17.97■□□□□ 0.47
ABCF3-201ENST00000292808 ATF7IPQ6VMQ6 1270 aa17.97■□□□□ 0.47
ABCF3-201ENST00000292808 CRYBG1Q9Y4K1 1723 aa17.97■□□□□ 0.47
ABCF3-201ENST00000292808 ELL2O00472 640 aaPredicted RBP17.96■□□□□ 0.47
ABCF3-201ENST00000292808 IGHDP01880 384 aa17.96■□□□□ 0.47
ABCF3-201ENST00000292808 MVPQ14764 893 aaKnown RBP17.96■□□□□ 0.47
ABCF3-201ENST00000292808 NCAPD2Q15021 1401 aa17.96■□□□□ 0.47
ABCF3-201ENST00000292808 ZBTB7CA1YPR0 619 aa17.96■□□□□ 0.47
ABCF3-201ENST00000292808 TWISTNBQ3B726 338 aaPredicted RBP17.96■□□□□ 0.47
ABCF3-201ENST00000292808 NPM2Q86SE8 214 aaKnown RBP17.96■□□□□ 0.47
ABCF3-201ENST00000292808 MRPL50Q8N5N7 158 aaKnown RBP17.96■□□□□ 0.47
ABCF3-201ENST00000292808 GAS2L2Q8NHY3 880 aa17.96■□□□□ 0.47
ABCF3-201ENST00000292808 KIF16BQ96L93 1317 aa17.95■□□□□ 0.46
ABCF3-201ENST00000292808 KRT24Q2M2I5 525 aa17.95■□□□□ 0.46
ABCF3-201ENST00000292808 PCDHB15Q9Y5E8 787 aa17.94■□□□□ 0.46
ABCF3-201ENST00000292808 RGS3P49796 1198 aa17.94■□□□□ 0.46
ABCF3-201ENST00000292808 LRRC59Q96AG4 307 aaKnown RBP17.94■□□□□ 0.46
ABCF3-201ENST00000292808 FTSJ3Q8IY81 847 aaKnown RBP17.93■□□□□ 0.46
ABCF3-201ENST00000292808 AXIN2Q9Y2T1 843 aa17.93■□□□□ 0.46
ABCF3-201ENST00000292808 TNS3Q68CZ2 1445 aa17.93■□□□□ 0.46
ABCF3-201ENST00000292808 COL18A1P39060 1754 aa17.92■□□□□ 0.46
ABCF3-201ENST00000292808 LMO7Q8WWI1 1683 aa17.92■□□□□ 0.46
ABCF3-201ENST00000292808 KIAA0232Q92628 1395 aa17.92■□□□□ 0.46
ABCF3-201ENST00000292808 ZBTB47Q9UFB7 747 aaPredicted RBP17.92■□□□□ 0.46
ABCF3-201ENST00000292808 NPHP3Q7Z494 1330 aa17.92■□□□□ 0.46
ABCF3-201ENST00000292808 MAP3K5Q99683 1374 aa17.92■□□□□ 0.46
ABCF3-201ENST00000292808 AAMPQ13685 434 aa17.92■□□□□ 0.46
ABCF3-201ENST00000292808 TMEM57Q8N5G2 664 aa17.92■□□□□ 0.46
ABCF3-201ENST00000292808 HTATSF1O43719 755 aaKnown RBP17.91■□□□□ 0.46
ABCF3-201ENST00000292808 MIS18AQ9NYP9 233 aa17.91■□□□□ 0.46
ABCF3-201ENST00000292808 GNAT3A8MTJ3 354 aa17.9■□□□□ 0.46
ABCF3-201ENST00000292808 BRINP3Q76B58 766 aa17.9■□□□□ 0.46
ABCF3-201ENST00000292808 RTF1Q92541 710 aaKnown RBP17.9■□□□□ 0.46
ABCF3-201ENST00000292808 IPO8O15397 1037 aaKnown RBP17.9■□□□□ 0.46
ABCF3-201ENST00000292808 IL17REQ8NFR9 667 aa17.9■□□□□ 0.46
ABCF3-201ENST00000292808 ANKRD24Q8TF21 1146 aa17.89■□□□□ 0.45
ABCF3-201ENST00000292808 SPATA31A3Q5VYP0 1347 aa17.89■□□□□ 0.45
ABCF3-201ENST00000292808 ZC3H6P61129 1189 aaKnown RBP17.88■□□□□ 0.45
ABCF3-201ENST00000292808 ARHGAP45Q92619 1136 aa17.88■□□□□ 0.45
ABCF3-201ENST00000292808 ITPRIPQ8IWB1 547 aa17.88■□□□□ 0.45
ABCF3-201ENST00000292808 CABLES1Q8TDN4 633 aa17.87■□□□□ 0.45
ABCF3-201ENST00000292808 DDX19BQ9UMR2 479 aa17.87■□□□□ 0.45
ABCF3-201ENST00000292808 ABCC4O15439 1325 aa17.87■□□□□ 0.45
ABCF3-201ENST00000292808 FAM208AQ9UK61 1670 aaKnown RBP17.87■□□□□ 0.45
ABCF3-201ENST00000292808 ERBB3P21860 1342 aa17.86■□□□□ 0.45
ABCF3-201ENST00000292808 TSPYL4Q9UJ04 414 aa17.86■□□□□ 0.45
ABCF3-201ENST00000292808 RGS12O14924 1447 aa17.86■□□□□ 0.45
ABCF3-201ENST00000292808 CEMIPQ8WUJ3 1361 aa17.86■□□□□ 0.45
ABCF3-201ENST00000292808 VIRMAQ69YN4 1812 aaKnown RBP17.85■□□□□ 0.45
ABCF3-201ENST00000292808 ZBTB40Q9NUA8 1239 aa17.85■□□□□ 0.45
ABCF3-201ENST00000292808 SLAIN2Q9P270 581 aa17.84■□□□□ 0.45
ABCF3-201ENST00000292808 ABCC6O95255 1503 aa17.84■□□□□ 0.45
ABCF3-201ENST00000292808 FAM161AQ3B820 660 aa17.83■□□□□ 0.45
ABCF3-201ENST00000292808 KDM3BQ7LBC6 1761 aa17.83■□□□□ 0.44
ABCF3-201ENST00000292808 SOS2Q07890 1332 aaPredicted RBP17.82■□□□□ 0.44
ABCF3-201ENST00000292808 C8orf34Q49A92 452 aa17.82■□□□□ 0.44
ABCF3-201ENST00000292808 ABCA3Q99758 1704 aa17.82■□□□□ 0.44
ABCF3-201ENST00000292808 NHSL1Q5SYE7 1610 aa17.81■□□□□ 0.44
ABCF3-201ENST00000292808 LGR6Q9HBX8 967 aa17.81■□□□□ 0.44
ABCF3-201ENST00000292808 ADAMTS7Q9UKP4 1686 aa17.81■□□□□ 0.44
ABCF3-201ENST00000292808 RWDD1Q9H446 243 aaPredicted RBP17.8■□□□□ 0.44
ABCF3-201ENST00000292808 CPDO75976 1380 aa17.8■□□□□ 0.44
ABCF3-201ENST00000292808 ZBTB7BO15156 539 aaPredicted RBP17.8■□□□□ 0.44
ABCF3-201ENST00000292808 TAF7Q15545 349 aaPredicted RBP17.8■□□□□ 0.44
ABCF3-201ENST00000292808 ZNF530Q6P9A1 599 aaPredicted RBP17.8■□□□□ 0.44
ABCF3-201ENST00000292808 PLEKHO1Q53GL0 409 aaPredicted RBP17.79■□□□□ 0.44
ABCF3-201ENST00000292808 DDRGK1Q96HY6 314 aa17.79■□□□□ 0.44
ABCF3-201ENST00000292808 API5Q9BZZ5 524 aaKnown RBP17.79■□□□□ 0.44
ABCF3-201ENST00000292808 HAP1P54257 671 aaPredicted RBP17.79■□□□□ 0.44
ABCF3-201ENST00000292808 CHRNA2Q15822 529 aa17.79■□□□□ 0.44
ABCF3-201ENST00000292808 AKAP4Q5JQC9 854 aa17.79■□□□□ 0.44
ABCF3-201ENST00000292808 BABAM1Q9NWV8 329 aa17.79■□□□□ 0.44
ABCF3-201ENST00000292808 HDAC1Q13547 482 aaPredicted RBP17.78■□□□□ 0.44
ABCF3-201ENST00000292808 SIPA1L3O60292 1781 aaPredicted RBP17.78■□□□□ 0.44
ABCF3-201ENST00000292808 AMOTQ4VCS5 1084 aa17.78■□□□□ 0.44
ABCF3-201ENST00000292808 PDZRN3Q9UPQ7 1066 aa17.77■□□□□ 0.44
ABCF3-201ENST00000292808 MEGF6O75095 1541 aa17.77■□□□□ 0.44
ABCF3-201ENST00000292808 OVOS2A0A0G2JMS6 1433 aa17.76■□□□□ 0.43
ABCF3-201ENST00000292808 G2E3Q7L622 706 aa17.76■□□□□ 0.43
ABCF3-201ENST00000292808 MPRIPQ6WCQ1 1025 aa17.76■□□□□ 0.43
ABCF3-201ENST00000292808 SLC4A2P04920 1241 aa17.75■□□□□ 0.43
ABCF3-201ENST00000292808 INTS3Q68E01 1043 aaKnown RBP17.75■□□□□ 0.43
ABCF3-201ENST00000292808 NLRP2Q9NX02 1062 aa17.75■□□□□ 0.43
ABCF3-201ENST00000292808 PTPRCP08575 1304 aa17.75■□□□□ 0.43
ABCF3-201ENST00000292808 RNMTO43148 476 aaKnown RBP17.74■□□□□ 0.43
ABCF3-201ENST00000292808 C1orf115Q9H7X2 142 aa17.74■□□□□ 0.43
ABCF3-201ENST00000292808 CACNA1FO60840 1977 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms