RNA–Protein interactions for RNA: ENST00000291525.11

TFF3-201, Transcript of trefoil factor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TFF3, Length 407 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-201ENST00000291525 ZBTB7AO95365 584 aa24.05■■□□□ 1.44
TFF3-201ENST00000291525 NBPF6Q5VWK0 638 aa24.05■■□□□ 1.44
TFF3-201ENST00000291525 NBPF4Q96M43 638 aa24.05■■□□□ 1.44
TFF3-201ENST00000291525 SLC27A3Q5K4L6 730 aa24.04■■□□□ 1.44
TFF3-201ENST00000291525 SYTL4Q96C24 671 aaPredicted RBP24.04■■□□□ 1.44
TFF3-201ENST00000291525 CARD14Q9BXL6 1004 aa24.03■■□□□ 1.44
TFF3-201ENST00000291525 PDGFDQ9GZP0 370 aaPredicted RBP24.03■■□□□ 1.44
TFF3-201ENST00000291525 TATP17735 454 aaPredicted RBP24.02■■□□□ 1.44
TFF3-201ENST00000291525 MTFR1LQ9H019 292 aa24.02■■□□□ 1.44
TFF3-201ENST00000291525 HSP90AB2PQ58FF8 381 aa24.01■■□□□ 1.43
TFF3-201ENST00000291525 USHBP1Q8N6Y0 703 aa24.01■■□□□ 1.43
TFF3-201ENST00000291525 PRIM1P49642 420 aaKnown RBP24■■□□□ 1.43
TFF3-201ENST00000291525 ATF5Q9Y2D1 282 aaPredicted RBP24■■□□□ 1.43
TFF3-201ENST00000291525 QSER1Q2KHR3 1735 aa23.99■■□□□ 1.43
TFF3-201ENST00000291525 ANKRD26Q9UPS8 1709 aa23.99■■□□□ 1.43
TFF3-201ENST00000291525 POLR3GLQ9BT43 218 aa23.99■■□□□ 1.43
TFF3-201ENST00000291525 LY75O60449 1722 aa23.98■■□□□ 1.43
TFF3-201ENST00000291525 EIF4G2P78344 907 aaKnown RBP eCLIP23.98■■□□□ 1.43
TFF3-201ENST00000291525 CCER1Q8TC90 406 aaPredicted RBP23.98■■□□□ 1.43
TFF3-201ENST00000291525 LRRC4BQ9NT99 713 aa23.98■■□□□ 1.43
TFF3-201ENST00000291525 PCDH11XQ9BZA7 1347 aa23.98■■□□□ 1.43
TFF3-201ENST00000291525 PCDH11YQ9BZA8 1340 aa23.98■■□□□ 1.43
TFF3-201ENST00000291525 PTGER2P43116 358 aa23.97■■□□□ 1.43
TFF3-201ENST00000291525 EMILIN1Q9Y6C2 1016 aa23.97■■□□□ 1.43
TFF3-201ENST00000291525 MAP2P11137 1827 aaKnown RBP23.96■■□□□ 1.43
TFF3-201ENST00000291525 NSD2O96028 1365 aa23.96■■□□□ 1.43
TFF3-201ENST00000291525 ZNF827Q17R98 1081 aa23.96■■□□□ 1.43
TFF3-201ENST00000291525 PPM1GO15355 546 aaPredicted RBP23.95■■□□□ 1.42
TFF3-201ENST00000291525 AKT1S1Q96B36 256 aa23.94■■□□□ 1.42
TFF3-201ENST00000291525 HMGB2P26583 209 aaKnown RBP23.93■■□□□ 1.42
TFF3-201ENST00000291525 SLC16A10Q8TF71 515 aa23.92■■□□□ 1.42
TFF3-201ENST00000291525 PKD1L3Q7Z443 1732 aa23.92■■□□□ 1.42
TFF3-201ENST00000291525 WASHC2AQ641Q2 1341 aa23.91■■□□□ 1.42
TFF3-201ENST00000291525 HSPA5P11021 654 aaKnown RBP23.91■■□□□ 1.42
TFF3-201ENST00000291525 TFCP2L1Q9NZI6 479 aa23.91■■□□□ 1.42
TFF3-201ENST00000291525 CCNL1Q9UK58 526 aaPredicted RBP23.91■■□□□ 1.42
TFF3-201ENST00000291525 YY1P25490 414 aa23.9■■□□□ 1.42
TFF3-201ENST00000291525 SGIP1Q9BQI5 828 aa23.9■■□□□ 1.42
TFF3-201ENST00000291525 NCAPD2Q15021 1401 aa23.9■■□□□ 1.42
TFF3-201ENST00000291525 TUBGCP6Q96RT7 1819 aa23.89■■□□□ 1.42
TFF3-201ENST00000291525 ARXQ96QS3 562 aa23.89■■□□□ 1.41
TFF3-201ENST00000291525 FHDC1Q9C0D6 1143 aaPredicted RBP23.89■■□□□ 1.41
TFF3-201ENST00000291525 SPG7Q9UQ90 795 aa23.88■■□□□ 1.41
TFF3-201ENST00000291525 SYT17Q9BSW7 474 aa23.87■■□□□ 1.41
TFF3-201ENST00000291525 PNPLA7Q6ZV29 1317 aa23.86■■□□□ 1.41
TFF3-201ENST00000291525 POLD1P28340 1107 aa23.86■■□□□ 1.41
TFF3-201ENST00000291525 KCNQ4P56696 695 aa23.86■■□□□ 1.41
TFF3-201ENST00000291525 POLKQ9UBT6 870 aa23.86■■□□□ 1.41
TFF3-201ENST00000291525 ITGB4P16144 1822 aa23.85■■□□□ 1.41
TFF3-201ENST00000291525 CYP27B1O15528 508 aa23.85■■□□□ 1.41
TFF3-201ENST00000291525 C5P01031 1676 aa23.84■■□□□ 1.41
TFF3-201ENST00000291525 MAP3K5Q99683 1374 aa23.84■■□□□ 1.41
TFF3-201ENST00000291525 EYA1Q99502 592 aa23.84■■□□□ 1.41
TFF3-201ENST00000291525 COL24A1Q17RW2 1714 aa23.84■■□□□ 1.41
TFF3-201ENST00000291525 TOGARAM1Q9Y4F4 1720 aa23.84■■□□□ 1.41
TFF3-201ENST00000291525 TNNT2P45379 298 aaPredicted RBP23.83■■□□□ 1.41
TFF3-201ENST00000291525 MPRIPQ6WCQ1 1025 aa23.83■■□□□ 1.41
TFF3-201ENST00000291525 SMARCC1Q92922 1105 aaPredicted RBP23.83■■□□□ 1.41
TFF3-201ENST00000291525 PANK3Q9H999 370 aa23.83■■□□□ 1.41
TFF3-201ENST00000291525 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.83■■□□□ 1.41
TFF3-201ENST00000291525 PALLDQ8WX93 1383 aa23.82■■□□□ 1.4
TFF3-201ENST00000291525 PLEKHG2Q9H7P9 1386 aa23.81■■□□□ 1.4
TFF3-201ENST00000291525 TAF1LQ8IZX4 1826 aa23.8■■□□□ 1.4
TFF3-201ENST00000291525 NKX1-1Q15270 411 aaPredicted RBP23.8■■□□□ 1.4
TFF3-201ENST00000291525 MSH5O43196 834 aa23.79■■□□□ 1.4
TFF3-201ENST00000291525 EIF4A2Q14240 407 aaKnown RBP23.78■■□□□ 1.4
TFF3-201ENST00000291525 IFNL2Q8IZJ0 200 aa23.77■■□□□ 1.4
TFF3-201ENST00000291525 FLAD1Q8NFF5 587 aa23.77■■□□□ 1.4
TFF3-201ENST00000291525 KLHL34Q8N239 644 aa23.76■■□□□ 1.39
TFF3-201ENST00000291525 MORC1Q86VD1 984 aa23.75■■□□□ 1.39
TFF3-201ENST00000291525 TMOD3Q9NYL9 352 aa23.75■■□□□ 1.39
TFF3-201ENST00000291525 KNSTRNQ9Y448 316 aa23.75■■□□□ 1.39
TFF3-201ENST00000291525 CHD4Q14839 1912 aa23.74■■□□□ 1.39
TFF3-201ENST00000291525 C4BP0C0L5 1744 aa23.74■■□□□ 1.39
TFF3-201ENST00000291525 COL23A1Q86Y22 540 aaPredicted RBP23.74■■□□□ 1.39
TFF3-201ENST00000291525 PIGBQ92521 554 aa23.74■■□□□ 1.39
TFF3-201ENST00000291525 IGSF1Q8N6C5 1336 aa23.74■■□□□ 1.39
TFF3-201ENST00000291525 PHKG2P15735 406 aa23.73■■□□□ 1.39
TFF3-201ENST00000291525 AK7Q96M32 723 aa23.72■■□□□ 1.39
TFF3-201ENST00000291525 HSP90AB1P08238 724 aaKnown RBP23.7■■□□□ 1.38
TFF3-201ENST00000291525 GPR162Q16538 588 aa23.69■■□□□ 1.38
TFF3-201ENST00000291525 LOC102724428A0A0B4J2F2 783 aa23.68■■□□□ 1.38
TFF3-201ENST00000291525 SIK1P57059 783 aa23.68■■□□□ 1.38
TFF3-201ENST00000291525 PLEKHO1Q53GL0 409 aaPredicted RBP23.68■■□□□ 1.38
TFF3-201ENST00000291525 UBR3Q6ZT12 1888 aa23.68■■□□□ 1.38
TFF3-201ENST00000291525 AMOTQ4VCS5 1084 aa23.67■■□□□ 1.38
TFF3-201ENST00000291525 MSL1Q68DK7 614 aa23.66■■□□□ 1.38
TFF3-201ENST00000291525 DCAF5Q96JK2 942 aa23.65■■□□□ 1.38
TFF3-201ENST00000291525 KIF7Q2M1P5 1343 aa23.64■■□□□ 1.38
TFF3-201ENST00000291525 ERVV-2B6SEH9 535 aa23.64■■□□□ 1.37
TFF3-201ENST00000291525 ASAP1Q9ULH1 1129 aa23.64■■□□□ 1.37
TFF3-201ENST00000291525 SSFA2P28290 1259 aa23.63■■□□□ 1.37
TFF3-201ENST00000291525 ATP6V1AP38606 617 aa23.63■■□□□ 1.37
TFF3-201ENST00000291525 ZNF530Q6P9A1 599 aaPredicted RBP23.63■■□□□ 1.37
TFF3-201ENST00000291525 PELP1Q8IZL8 1130 aaKnown RBP23.63■■□□□ 1.37
TFF3-201ENST00000291525 PHF14O94880 888 aa23.62■■□□□ 1.37
TFF3-201ENST00000291525 C1orf141Q5JVX7 400 aa23.62■■□□□ 1.37
TFF3-201ENST00000291525 LINC00116Q8NCU8 138 aa23.62■■□□□ 1.37
TFF3-201ENST00000291525 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.61■■□□□ 1.37
TFF3-201ENST00000291525 AMER1Q5JTC6 1135 aaPredicted RBP23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms