RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 CAGE1Q8TC20 777 aa20.72■□□□□ 0.91
PCDHA13-201ENST00000289272 TRIM34Q9BYJ4 488 aa20.72■□□□□ 0.91
PCDHA13-201ENST00000289272 CFAP45Q9UL16 551 aa20.72■□□□□ 0.91
PCDHA13-201ENST00000289272 ABCC11Q96J66 1382 aa20.72■□□□□ 0.91
PCDHA13-201ENST00000289272 TBC1D32Q96NH3 1257 aa20.72■□□□□ 0.91
PCDHA13-201ENST00000289272 SMTNL1A8MU46 457 aa20.71■□□□□ 0.91
PCDHA13-201ENST00000289272 CAVIN2O95810 425 aa20.71■□□□□ 0.91
PCDHA13-201ENST00000289272 TERF1P54274 439 aa20.71■□□□□ 0.91
PCDHA13-201ENST00000289272 MAP3K11Q16584 847 aa20.71■□□□□ 0.91
PCDHA13-201ENST00000289272 UBXN4Q92575 508 aa20.71■□□□□ 0.91
PCDHA13-201ENST00000289272 TMEM57Q8N5G2 664 aa20.7■□□□□ 0.91
PCDHA13-201ENST00000289272 TNPO1Q92973 898 aaKnown RBP20.7■□□□□ 0.9
PCDHA13-201ENST00000289272 KIF18AQ8NI77 898 aa20.7■□□□□ 0.9
PCDHA13-201ENST00000289272 PDILTQ8N807 584 aa20.7■□□□□ 0.9
PCDHA13-201ENST00000289272 MCM3P25205 808 aa20.69■□□□□ 0.9
PCDHA13-201ENST00000289272 PAXBP1Q9Y5B6 917 aa20.69■□□□□ 0.9
PCDHA13-201ENST00000289272 AIMP1Q12904 312 aaKnown RBP20.69■□□□□ 0.9
PCDHA13-201ENST00000289272 GOLGA6L7A0A1B0GV03 622 aa20.68■□□□□ 0.9
PCDHA13-201ENST00000289272 SYCE3A1L190 88 aa20.68■□□□□ 0.9
PCDHA13-201ENST00000289272 PTPN14Q15678 1187 aa20.68■□□□□ 0.9
PCDHA13-201ENST00000289272 XBP1P17861 261 aa20.68■□□□□ 0.9
PCDHA13-201ENST00000289272 SPG7Q9UQ90 795 aa20.68■□□□□ 0.9
PCDHA13-201ENST00000289272 POTEB2H3BUK9 544 aa20.67■□□□□ 0.9
PCDHA13-201ENST00000289272 ALDH1L2Q3SY69 923 aa20.67■□□□□ 0.9
PCDHA13-201ENST00000289272 TUBB4AP04350 444 aa20.67■□□□□ 0.9
PCDHA13-201ENST00000289272 CCDC27Q2M243 656 aa20.67■□□□□ 0.9
PCDHA13-201ENST00000289272 RBM33Q96EV2 1170 aaKnown RBP20.67■□□□□ 0.9
PCDHA13-201ENST00000289272 ZSCAN12O43309 604 aa20.66■□□□□ 0.9
PCDHA13-201ENST00000289272 HDGFL1Q5TGJ6 251 aa20.66■□□□□ 0.9
PCDHA13-201ENST00000289272 RALYLQ86SE5 291 aaKnown RBP20.66■□□□□ 0.9
PCDHA13-201ENST00000289272 SMAP1Q8IYB5 467 aaPredicted RBP20.66■□□□□ 0.9
PCDHA13-201ENST00000289272 BRMS1Q9HCU9 246 aa20.66■□□□□ 0.9
PCDHA13-201ENST00000289272 SSH1Q8WYL5 1049 aa20.66■□□□□ 0.9
PCDHA13-201ENST00000289272 LRRCC1Q9C099 1032 aa20.66■□□□□ 0.9
PCDHA13-201ENST00000289272 CCDC61Q9Y6R9 512 aa20.66■□□□□ 0.9
PCDHA13-201ENST00000289272 RRS1Q15050 365 aaKnown RBP20.66■□□□□ 0.9
PCDHA13-201ENST00000289272 KIF6Q6ZMV9 814 aa20.66■□□□□ 0.9
PCDHA13-201ENST00000289272 DENND4BO75064 1496 aaPredicted RBP20.66■□□□□ 0.9
PCDHA13-201ENST00000289272 ATP10BO94823 1461 aa20.66■□□□□ 0.9
PCDHA13-201ENST00000289272 AXDND1Q5T1B0 1012 aaPredicted RBP20.65■□□□□ 0.9
PCDHA13-201ENST00000289272 ERICH2A1L162 156 aa20.65■□□□□ 0.9
PCDHA13-201ENST00000289272 CBX1P83916 185 aa20.65■□□□□ 0.9
PCDHA13-201ENST00000289272 NUP160Q12769 1436 aa20.65■□□□□ 0.9
PCDHA13-201ENST00000289272 NSD2O96028 1365 aa20.65■□□□□ 0.9
PCDHA13-201ENST00000289272 CTAGE5O15320 804 aa20.65■□□□□ 0.9
PCDHA13-201ENST00000289272 SKAP1Q86WV1 359 aa20.64■□□□□ 0.89
PCDHA13-201ENST00000289272 KCNH5Q8NCM2 988 aa20.64■□□□□ 0.89
PCDHA13-201ENST00000289272 GOLGA6L10A6NI86 522 aa20.64■□□□□ 0.89
PCDHA13-201ENST00000289272 OFD1O75665 1012 aa20.64■□□□□ 0.89
PCDHA13-201ENST00000289272 TIGD1Q96MW7 591 aa20.64■□□□□ 0.89
PCDHA13-201ENST00000289272 XRCC6P12956 609 aaKnown RBP eCLIP20.63■□□□□ 0.89
PCDHA13-201ENST00000289272 STK38Q15208 465 aa20.63■□□□□ 0.89
PCDHA13-201ENST00000289272 ZRSR2Q15696 482 aaKnown RBP20.63■□□□□ 0.89
PCDHA13-201ENST00000289272 SNX21Q969T3 373 aa20.63■□□□□ 0.89
PCDHA13-201ENST00000289272 NUDT16Q96DE0 195 aaKnown RBP20.63■□□□□ 0.89
PCDHA13-201ENST00000289272 FSD1Q9BTV5 496 aa20.63■□□□□ 0.89
PCDHA13-201ENST00000289272 LUC7LQ9NQ29 371 aaKnown RBP20.63■□□□□ 0.89
PCDHA13-201ENST00000289272 SERPINC1P01008 464 aa20.63■□□□□ 0.89
PCDHA13-201ENST00000289272 GSDMDP57764 484 aa20.63■□□□□ 0.89
PCDHA13-201ENST00000289272 XPCQ01831 940 aaPredicted RBP20.63■□□□□ 0.89
PCDHA13-201ENST00000289272 KRT32Q14532 448 aa20.63■□□□□ 0.89
PCDHA13-201ENST00000289272 PPFIBP1Q86W92 1011 aa20.63■□□□□ 0.89
PCDHA13-201ENST00000289272 SPATA32Q96LK8 384 aa20.63■□□□□ 0.89
PCDHA13-201ENST00000289272 PRAG1Q86YV5 1406 aa20.63■□□□□ 0.89
PCDHA13-201ENST00000289272 RBM25P49756 843 aaKnown RBP20.63■□□□□ 0.89
PCDHA13-201ENST00000289272 BMS1Q14692 1282 aaKnown RBP20.63■□□□□ 0.89
PCDHA13-201ENST00000289272 DNAJC2Q99543 621 aaKnown RBP20.63■□□□□ 0.89
PCDHA13-201ENST00000289272 SCAND2PQ9GZW5 306 aaPredicted RBP20.63■□□□□ 0.89
PCDHA13-201ENST00000289272 NOS1P29475 1434 aa20.63■□□□□ 0.89
PCDHA13-201ENST00000289272 PARD3Q8TEW0 1356 aa20.62■□□□□ 0.89
PCDHA13-201ENST00000289272 WDR62O43379 1518 aa20.62■□□□□ 0.89
PCDHA13-201ENST00000289272 MAP9Q49MG5 647 aa20.62■□□□□ 0.89
PCDHA13-201ENST00000289272 LARP1BQ659C4 914 aaKnown RBP20.62■□□□□ 0.89
PCDHA13-201ENST00000289272 C14orf93Q9H972 538 aaKnown RBP20.62■□□□□ 0.89
PCDHA13-201ENST00000289272 NEUROD6Q96NK8 337 aa20.61■□□□□ 0.89
PCDHA13-201ENST00000289272 CCDC94Q9BW85 323 aaPredicted RBP20.61■□□□□ 0.89
PCDHA13-201ENST00000289272 SH2B1Q9NRF2 756 aaPredicted RBP20.61■□□□□ 0.89
PCDHA13-201ENST00000289272 ZNHIT6Q9NWK9 470 aaKnown RBP20.61■□□□□ 0.89
PCDHA13-201ENST00000289272 BMP2KLQ5H9B9 411 aa20.61■□□□□ 0.89
PCDHA13-201ENST00000289272 PPP4R3BQ5MIZ7 849 aa20.61■□□□□ 0.89
PCDHA13-201ENST00000289272 VPS53Q5VIR6 699 aa20.61■□□□□ 0.89
PCDHA13-201ENST00000289272 CTDP1Q9Y5B0 961 aaPredicted RBP20.61■□□□□ 0.89
PCDHA13-201ENST00000289272 FANCAO15360 1455 aa20.6■□□□□ 0.89
PCDHA13-201ENST00000289272 ERLIN2O94905 339 aa20.6■□□□□ 0.89
PCDHA13-201ENST00000289272 LRSAM1Q6UWE0 723 aa20.6■□□□□ 0.89
PCDHA13-201ENST00000289272 NFXL1Q6ZNB6 911 aa20.6■□□□□ 0.89
PCDHA13-201ENST00000289272 DUOX2Q9NRD8 1548 aa20.6■□□□□ 0.89
PCDHA13-201ENST00000289272 GOLGA6L9A6NEM1 432 aa20.6■□□□□ 0.89
PCDHA13-201ENST00000289272 UPF3BQ9BZI7 483 aaKnown RBP20.6■□□□□ 0.89
PCDHA13-201ENST00000289272 ZKSCAN5Q9Y2L8 839 aa20.59■□□□□ 0.89
PCDHA13-201ENST00000289272 CCDC171Q6TFL3 1326 aa20.59■□□□□ 0.89
PCDHA13-201ENST00000289272 KIAA0556O60303 1618 aa20.59■□□□□ 0.89
PCDHA13-201ENST00000289272 DDX11Q96FC9 970 aa20.59■□□□□ 0.89
PCDHA13-201ENST00000289272 ANO10Q9NW15 660 aa20.59■□□□□ 0.89
PCDHA13-201ENST00000289272 BAG4O95429 457 aaKnown RBP20.58■□□□□ 0.89
PCDHA13-201ENST00000289272 KRT222Q8N1A0 295 aa20.58■□□□□ 0.89
PCDHA13-201ENST00000289272 DDX19AQ9NUU7 478 aaKnown RBP20.58■□□□□ 0.89
PCDHA13-201ENST00000289272 ZNF530Q6P9A1 599 aaPredicted RBP20.58■□□□□ 0.89
PCDHA13-201ENST00000289272 THUMPD2Q9BTF0 503 aaKnown RBP20.58■□□□□ 0.89
PCDHA13-201ENST00000289272 TBC1D2BQ9UPU7 963 aa20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms