RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 HDGFL2Q7Z4V5 671 aaPredicted RBP14.13□□□□□ -0.15
SCLT1-201ENST00000281142 NGDNQ8NEJ9 315 aaKnown RBP14.13□□□□□ -0.15
SCLT1-201ENST00000281142 GAS2L2Q8NHY3 880 aa14.13□□□□□ -0.15
SCLT1-201ENST00000281142 CERKQ8TCT0 537 aa14.13□□□□□ -0.15
SCLT1-201ENST00000281142 GBP4Q96PP9 640 aa14.13□□□□□ -0.15
SCLT1-201ENST00000281142 BRINP3Q76B58 766 aa14.12□□□□□ -0.15
SCLT1-201ENST00000281142 ROBO1Q9Y6N7 1651 aa14.12□□□□□ -0.15
SCLT1-201ENST00000281142 USP6P35125 1406 aa14.12□□□□□ -0.15
SCLT1-201ENST00000281142 CHD1LQ86WJ1 897 aa14.12□□□□□ -0.15
SCLT1-201ENST00000281142 DDX17Q92841 729 aaKnown RBP14.12□□□□□ -0.15
SCLT1-201ENST00000281142 FOXO3O43524 673 aa14.11□□□□□ -0.15
SCLT1-201ENST00000281142 PLEKHF1Q96S99 279 aa14.11□□□□□ -0.15
SCLT1-201ENST00000281142 KIF20BQ96Q89 1820 aa14.11□□□□□ -0.15
SCLT1-201ENST00000281142 ANKRD45Q5TZF3 282 aa14.11□□□□□ -0.15
SCLT1-201ENST00000281142 KIAA1211Q6ZU35 1233 aa14.1□□□□□ -0.15
SCLT1-201ENST00000281142 PDCL3Q9H2J4 239 aa14.1□□□□□ -0.15
SCLT1-201ENST00000281142 GGNBP2Q9H3C7 697 aa14.1□□□□□ -0.15
SCLT1-201ENST00000281142 XPCQ01831 940 aaPredicted RBP14.1□□□□□ -0.15
SCLT1-201ENST00000281142 EDC4Q6P2E9 1401 aaKnown RBP14.1□□□□□ -0.15
SCLT1-201ENST00000281142 SSH2Q76I76 1423 aa14.1□□□□□ -0.15
SCLT1-201ENST00000281142 ISY1Q9ULR0 285 aaKnown RBP14.1□□□□□ -0.15
SCLT1-201ENST00000281142 TRPM3Q9HCF6 1732 aaPredicted RBP14.09□□□□□ -0.15
SCLT1-201ENST00000281142 TBC1D9Q6ZT07 1266 aa14.09□□□□□ -0.15
SCLT1-201ENST00000281142 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.09□□□□□ -0.151e-6■■□□□ 12.4
SCLT1-201ENST00000281142 PRDM4Q9UKN5 801 aa14.09□□□□□ -0.15
SCLT1-201ENST00000281142 CIZ1Q9ULV3 898 aaPredicted RBP14.09□□□□□ -0.15
SCLT1-201ENST00000281142 NHSL1Q5SYE7 1610 aa14.09□□□□□ -0.15
SCLT1-201ENST00000281142 K7ELQ4 463 aaPredicted RBP14.09□□□□□ -0.15
SCLT1-201ENST00000281142 TPM2P07951 284 aa14.09□□□□□ -0.15
SCLT1-201ENST00000281142 NASPP49321 788 aaPredicted RBP14.09□□□□□ -0.15
SCLT1-201ENST00000281142 RIPK4P57078 832 aa14.08□□□□□ -0.16
SCLT1-201ENST00000281142 PSME1Q06323 249 aa14.08□□□□□ -0.16
SCLT1-201ENST00000281142 PIK3C2AO00443 1686 aa14.08□□□□□ -0.16
SCLT1-201ENST00000281142 CALD1Q05682 793 aaKnown RBP14.07□□□□□ -0.16
SCLT1-201ENST00000281142 DDX49Q9Y6V7 483 aaKnown RBP14.07□□□□□ -0.16
SCLT1-201ENST00000281142 UBAP1LF5GYI3 381 aa14.07□□□□□ -0.16
SCLT1-201ENST00000281142 TOM1O60784 492 aa14.07□□□□□ -0.16
SCLT1-201ENST00000281142 CT47B1P0C2W7 299 aaPredicted RBP14.07□□□□□ -0.16
SCLT1-201ENST00000281142 BMP2KLQ5H9B9 411 aa14.07□□□□□ -0.16
SCLT1-201ENST00000281142 TTC21BQ7Z4L5 1316 aa14.07□□□□□ -0.16
SCLT1-201ENST00000281142 PXDNQ92626 1479 aa14.07□□□□□ -0.16
SCLT1-201ENST00000281142 ANKRD26Q9UPS8 1709 aa14.07□□□□□ -0.16
SCLT1-201ENST00000281142 RBM10P98175 930 aaKnown RBP14.06□□□□□ -0.16
SCLT1-201ENST00000281142 BAG4O95429 457 aaKnown RBP14.06□□□□□ -0.16
SCLT1-201ENST00000281142 SKOR2Q2VWA4 1001 aaPredicted RBP14.06□□□□□ -0.16
SCLT1-201ENST00000281142 FYB1O15117 783 aa14.06□□□□□ -0.16
SCLT1-201ENST00000281142 PIP4K2BP78356 416 aa14.06□□□□□ -0.16
SCLT1-201ENST00000281142 PKP1Q13835 747 aa14.06□□□□□ -0.16
SCLT1-201ENST00000281142 KRT28Q7Z3Y7 464 aa14.06□□□□□ -0.16
SCLT1-201ENST00000281142 NME9Q86XW9 330 aa14.06□□□□□ -0.16
SCLT1-201ENST00000281142 CHAMP1Q96JM3 812 aa14.06□□□□□ -0.16
SCLT1-201ENST00000281142 MARF1Q9Y4F3 1742 aaKnown RBP14.05□□□□□ -0.16
SCLT1-201ENST00000281142 PPP1R9BQ96SB3 815 aa14.05□□□□□ -0.16
SCLT1-201ENST00000281142 ZRANB1Q9UGI0 708 aa14.05□□□□□ -0.16
SCLT1-201ENST00000281142 NPHP3Q7Z494 1330 aa14.05□□□□□ -0.16
SCLT1-201ENST00000281142 NCLP19338 710 aaKnown RBP14.05□□□□□ -0.16
SCLT1-201ENST00000281142 CCDC173Q0VFZ6 552 aa14.05□□□□□ -0.16
SCLT1-201ENST00000281142 SIRT2Q8IXJ6 389 aa14.05□□□□□ -0.16
SCLT1-201ENST00000281142 THUMPD2Q9BTF0 503 aaKnown RBP14.05□□□□□ -0.16
SCLT1-201ENST00000281142 ALS2Q96Q42 1657 aa14.05□□□□□ -0.16
SCLT1-201ENST00000281142 A0A0U1RQG5 324 aaPredicted RBP14.04□□□□□ -0.16
SCLT1-201ENST00000281142 ELL2O00472 640 aaPredicted RBP14.04□□□□□ -0.16
SCLT1-201ENST00000281142 FBLN1P23142 703 aa14.04□□□□□ -0.16
SCLT1-201ENST00000281142 MCTP1Q6DN14 999 aa14.04□□□□□ -0.16
SCLT1-201ENST00000281142 KIF16BQ96L93 1317 aa14.04□□□□□ -0.16
SCLT1-201ENST00000281142 ZSCAN30Q86W11 494 aa14.04□□□□□ -0.16
SCLT1-201ENST00000281142 CAVIN1Q6NZI2 390 aaKnown RBP14.03□□□□□ -0.16
SCLT1-201ENST00000281142 AHDC1Q5TGY3 1603 aaPredicted RBP14.03□□□□□ -0.16
SCLT1-201ENST00000281142 ZBTB7BO15156 539 aaPredicted RBP14.03□□□□□ -0.16
SCLT1-201ENST00000281142 IPO8O15397 1037 aaKnown RBP14.02□□□□□ -0.16
SCLT1-201ENST00000281142 TSPYL6Q8N831 410 aa14.02□□□□□ -0.16
SCLT1-201ENST00000281142 SOS2Q07890 1332 aaPredicted RBP14.02□□□□□ -0.17
SCLT1-201ENST00000281142 TTC21AQ8NDW8 1320 aa14.02□□□□□ -0.17
SCLT1-201ENST00000281142 KLHL40Q2TBA0 621 aa14.02□□□□□ -0.17
SCLT1-201ENST00000281142 NUTM2GQ5VZR2 741 aa14.02□□□□□ -0.17
SCLT1-201ENST00000281142 COL3A1P02461 1466 aaPredicted RBP14.02□□□□□ -0.17
SCLT1-201ENST00000281142 USP54Q70EL1 1684 aa14.02□□□□□ -0.17
SCLT1-201ENST00000281142 PHLPP1O60346 1717 aa14.01□□□□□ -0.17
SCLT1-201ENST00000281142 GSPT1P15170 499 aaKnown RBP14.01□□□□□ -0.17
SCLT1-201ENST00000281142 RBSNQ9H1K0 784 aa14.01□□□□□ -0.17
SCLT1-201ENST00000281142 RBM27Q9P2N5 1060 aaKnown RBP14.01□□□□□ -0.17
SCLT1-201ENST00000281142 NCBP3Q53F19 620 aaKnown RBP14.01□□□□□ -0.17
SCLT1-201ENST00000281142 ABTB2Q8N961 1025 aa14.01□□□□□ -0.17
SCLT1-201ENST00000281142 NSD2O96028 1365 aa14.01□□□□□ -0.17
SCLT1-201ENST00000281142 OFD1O75665 1012 aa14.01□□□□□ -0.17
SCLT1-201ENST00000281142 R3HCC1Q9Y3T6 440 aaKnown RBP14.01□□□□□ -0.17
SCLT1-201ENST00000281142 OVOS2A0A0J9YW53 1432 aa14□□□□□ -0.17
SCLT1-201ENST00000281142 OVOS2Q6IE36 1432 aa14□□□□□ -0.17
SCLT1-201ENST00000281142 GOLGA6L22H0YM25 854 aa14□□□□□ -0.17
SCLT1-201ENST00000281142 MSNP26038 577 aaKnown RBP14□□□□□ -0.17
SCLT1-201ENST00000281142 ARID3AQ99856 593 aa14□□□□□ -0.17
SCLT1-201ENST00000281142 TNS3Q68CZ2 1445 aa14□□□□□ -0.17
SCLT1-201ENST00000281142 COL16A1Q07092 1604 aaPredicted RBP14□□□□□ -0.17
SCLT1-201ENST00000281142 SBNO1A3KN83 1393 aa14□□□□□ -0.17
SCLT1-201ENST00000281142 ZSCAN23Q3MJ62 389 aa13.99□□□□□ -0.17
SCLT1-201ENST00000281142 C16orf71Q8IYS4 520 aaPredicted RBP13.99□□□□□ -0.17
SCLT1-201ENST00000281142 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.99□□□□□ -0.17
SCLT1-201ENST00000281142 LMOD2Q6P5Q4 547 aa13.99□□□□□ -0.17
SCLT1-201ENST00000281142 LMBRD1Q9NUN5 540 aa13.99□□□□□ -0.17
SCLT1-201ENST00000281142 IL16Q14005 1332 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms