RNA–Protein interactions for RNA: ENST00000279804.2

CTF1-201, Transcript of cardiotrophin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTF1, Length 1,664 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTF1-201ENST00000279804 KDRP35968 1356 aa31.72■■■□□ 2.67
CTF1-201ENST00000279804 TATP17735 454 aaPredicted RBP31.72■■■□□ 2.67
CTF1-201ENST00000279804 FAM182BQ5T319 152 aa31.72■■■□□ 2.67
CTF1-201ENST00000279804 TNS2Q63HR2 1409 aa31.72■■■□□ 2.67
CTF1-201ENST00000279804 KRT27Q7Z3Y8 459 aa31.71■■■□□ 2.67
CTF1-201ENST00000279804 NUDCQ9Y266 331 aa31.7■■■□□ 2.67
CTF1-201ENST00000279804 EXOC5O00471 708 aa31.7■■■□□ 2.66
CTF1-201ENST00000279804 EP400Q96L91 3159 aa31.69■■■□□ 2.66
CTF1-201ENST00000279804 PDE3BQ13370 1112 aa31.69■■■□□ 2.66
CTF1-201ENST00000279804 U2AF1L5P0DN76 240 aaPredicted RBP31.67■■■□□ 2.66
CTF1-201ENST00000279804 U2AF1Q01081 240 aaKnown RBP eCLIP31.67■■■□□ 2.66
CTF1-201ENST00000279804 MRS2Q9HD23 443 aa31.67■■■□□ 2.66
CTF1-201ENST00000279804 ZCRB1Q8TBF4 217 aaKnown RBP31.65■■■□□ 2.66
CTF1-201ENST00000279804 MARCH10Q8NA82 808 aaPredicted RBP31.64■■■□□ 2.66
CTF1-201ENST00000279804 DDX54Q8TDD1 881 aaKnown RBP31.63■■■□□ 2.65
CTF1-201ENST00000279804 SBF2Q86WG5 1849 aa31.62■■■□□ 2.65
CTF1-201ENST00000279804 KAT6BQ8WYB5 2073 aa31.61■■■□□ 2.65
CTF1-201ENST00000279804 RSPH6AQ9H0K4 717 aa31.6■■■□□ 2.65
CTF1-201ENST00000279804 PRKAR2BP31323 418 aa31.58■■■□□ 2.65
CTF1-201ENST00000279804 VIRMAQ69YN4 1812 aaKnown RBP31.58■■■□□ 2.65
CTF1-201ENST00000279804 SPG7Q9UQ90 795 aa31.57■■■□□ 2.65
CTF1-201ENST00000279804 PCDH11XQ9BZA7 1347 aa31.56■■■□□ 2.64
CTF1-201ENST00000279804 PCDH11YQ9BZA8 1340 aa31.56■■■□□ 2.64
CTF1-201ENST00000279804 CYP27B1O15528 508 aa31.56■■■□□ 2.64
CTF1-201ENST00000279804 DOT1LQ8TEK3 1739 aa31.55■■■□□ 2.64
CTF1-201ENST00000279804 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.55■■■□□ 2.64
CTF1-201ENST00000279804 FCHSD2O94868 740 aa31.54■■■□□ 2.64
CTF1-201ENST00000279804 WDR43Q15061 677 aaKnown RBP eCLIP31.54■■■□□ 2.64
CTF1-201ENST00000279804 PLEKHO1Q53GL0 409 aaPredicted RBP31.54■■■□□ 2.64
CTF1-201ENST00000279804 PLEKHG2Q9H7P9 1386 aa31.54■■■□□ 2.64
CTF1-201ENST00000279804 PHACTR3Q96KR7 559 aa31.54■■■□□ 2.64
CTF1-201ENST00000279804 PNISRQ8TF01 805 aaKnown RBP31.52■■■□□ 2.64
CTF1-201ENST00000279804 ADAMTS8Q9UP79 889 aa31.52■■■□□ 2.64
CTF1-201ENST00000279804 TOGARAM1Q9Y4F4 1720 aa31.52■■■□□ 2.64
CTF1-201ENST00000279804 AMOTQ4VCS5 1084 aa31.51■■■□□ 2.64
CTF1-201ENST00000279804 ZNF530Q6P9A1 599 aaPredicted RBP31.51■■■□□ 2.63
CTF1-201ENST00000279804 FAM196AQ6ZSG2 479 aa31.51■■■□□ 2.63
CTF1-201ENST00000279804 DLG5Q8TDM6 1919 aa31.51■■■□□ 2.63
CTF1-201ENST00000279804 MTHFSDQ2M296 383 aaKnown RBP31.5■■■□□ 2.63
CTF1-201ENST00000279804 PHKG2P15735 406 aa31.48■■■□□ 2.63
CTF1-201ENST00000279804 ITGB4P16144 1822 aa31.48■■■□□ 2.63
CTF1-201ENST00000279804 PLEKHF1Q96S99 279 aa31.48■■■□□ 2.63
CTF1-201ENST00000279804 NHSQ6T4R5 1651 aa31.47■■■□□ 2.63
CTF1-201ENST00000279804 IFNL2Q8IZJ0 200 aa31.47■■■□□ 2.63
CTF1-201ENST00000279804 TNS1Q9HBL0 1735 aaKnown RBP31.47■■■□□ 2.63
CTF1-201ENST00000279804 CCDC146Q8IYE0 955 aa31.46■■■□□ 2.63
CTF1-201ENST00000279804 FAM9BQ8IZU0 186 aa31.46■■■□□ 2.63
CTF1-201ENST00000279804 ACSBG1Q96GR2 724 aa31.46■■■□□ 2.63
CTF1-201ENST00000279804 SCN11AQ9UI33 1791 aa31.46■■■□□ 2.63
CTF1-201ENST00000279804 BCL9O00512 1426 aa31.45■■■□□ 2.63
CTF1-201ENST00000279804 TRIM37O94972 964 aa31.43■■■□□ 2.62
CTF1-201ENST00000279804 C1orf141Q5JVX7 400 aa31.43■■■□□ 2.62
CTF1-201ENST00000279804 PTF1AQ7RTS3 328 aa31.43■■■□□ 2.62
CTF1-201ENST00000279804 KCNQ2O43526 872 aa31.41■■■□□ 2.62
CTF1-201ENST00000279804 BTAF1O14981 1849 aa31.41■■■□□ 2.62
CTF1-201ENST00000279804 NKX1-1Q15270 411 aaPredicted RBP31.41■■■□□ 2.62
CTF1-201ENST00000279804 UPF1Q92900 1129 aaKnown RBP eCLIP31.4■■■□□ 2.62
CTF1-201ENST00000279804 PNNQ9H307 717 aaKnown RBP31.4■■■□□ 2.62
CTF1-201ENST00000279804 KDM6AO15550 1401 aaPredicted RBP31.4■■■□□ 2.62
CTF1-201ENST00000279804 MAPK8IP3Q9UPT6 1336 aa31.39■■■□□ 2.62
CTF1-201ENST00000279804 AKAP4Q5JQC9 854 aa31.39■■■□□ 2.62
CTF1-201ENST00000279804 MPRIPQ6WCQ1 1025 aa31.39■■■□□ 2.62
CTF1-201ENST00000279804 GAS2L2Q8NHY3 880 aa31.39■■■□□ 2.62
CTF1-201ENST00000279804 NEFMP07197 916 aa31.38■■■□□ 2.61
CTF1-201ENST00000279804 ADAMTS7Q9UKP4 1686 aa31.37■■■□□ 2.61
CTF1-201ENST00000279804 SYTL4Q96C24 671 aaPredicted RBP31.37■■■□□ 2.61
CTF1-201ENST00000279804 PRIM1P49642 420 aaKnown RBP31.36■■■□□ 2.61
CTF1-201ENST00000279804 RUNDC1Q96C34 613 aa31.35■■■□□ 2.61
CTF1-201ENST00000279804 MAP3K5Q99683 1374 aa31.35■■■□□ 2.61
CTF1-201ENST00000279804 DCAF5Q96JK2 942 aa31.35■■■□□ 2.61
CTF1-201ENST00000279804 HSP90AB1P08238 724 aaKnown RBP31.34■■■□□ 2.61
CTF1-201ENST00000279804 LGR6Q9HBX8 967 aa31.34■■■□□ 2.61
CTF1-201ENST00000279804 GNAT3A8MTJ3 354 aa31.33■■■□□ 2.61
CTF1-201ENST00000279804 BCL11BQ9C0K0 894 aaPredicted RBP31.32■■■□□ 2.6
CTF1-201ENST00000279804 NFE2L2Q16236 605 aa31.32■■■□□ 2.6
CTF1-201ENST00000279804 RRP7AQ9Y3A4 280 aaKnown RBP31.31■■■□□ 2.6
CTF1-201ENST00000279804 SENP3-EIF4A1A0A087X0R7 540 aa31.3■■■□□ 2.6
CTF1-201ENST00000279804 SOCS7O14512 581 aa31.29■■■□□ 2.6
CTF1-201ENST00000279804 RNMTO43148 476 aaKnown RBP31.29■■■□□ 2.6
CTF1-201ENST00000279804 SIPA1L3O60292 1781 aaPredicted RBP31.29■■■□□ 2.6
CTF1-201ENST00000279804 TMPOP42166 694 aaKnown RBP31.28■■■□□ 2.6
CTF1-201ENST00000279804 NEUROD2Q15784 382 aa31.28■■■□□ 2.6
CTF1-201ENST00000279804 APBA3O96018 575 aa31.27■■■□□ 2.6
CTF1-201ENST00000279804 SF3B2Q13435 895 aaKnown RBP31.27■■■□□ 2.6
CTF1-201ENST00000279804 DCTN1Q14203 1278 aa31.27■■■□□ 2.6
CTF1-201ENST00000279804 IL17REQ8NFR9 667 aa31.27■■■□□ 2.6
CTF1-201ENST00000279804 CCDC125Q86Z20 511 aa31.26■■■□□ 2.6
CTF1-201ENST00000279804 ERVV-2B6SEH9 535 aa31.25■■■□□ 2.59
CTF1-201ENST00000279804 APAF1O14727 1248 aa31.25■■■□□ 2.59
CTF1-201ENST00000279804 MCM10Q7L590 875 aa31.25■■■□□ 2.59
CTF1-201ENST00000279804 YTHDC1Q96MU7 727 aaKnown RBP31.25■■■□□ 2.59
CTF1-201ENST00000279804 RIPK4P57078 832 aa31.25■■■□□ 2.59
CTF1-201ENST00000279804 DEFB132Q7Z7B7 95 aa31.25■■■□□ 2.59
CTF1-201ENST00000279804 PIGBQ92521 554 aa31.25■■■□□ 2.59
CTF1-201ENST00000279804 TMOD3Q9NYL9 352 aa31.25■■■□□ 2.59
CTF1-201ENST00000279804 MRC1P22897 1456 aa31.24■■■□□ 2.59
CTF1-201ENST00000279804 CABP4P57796 275 aa31.24■■■□□ 2.59
CTF1-201ENST00000279804 NFATC2IPQ8NCF5 419 aa31.23■■■□□ 2.59
CTF1-201ENST00000279804 RTF1Q92541 710 aaKnown RBP31.23■■■□□ 2.59
CTF1-201ENST00000279804 RGPD3A6NKT7 1758 aaPredicted RBP31.22■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms