RNA–Protein interactions for RNA: ENST00000278916.7

CHEK1-201, Transcript of checkpoint kinase 1, humanhuman

TSL 5 BASIC

Gene CHEK1, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-201ENST00000278916 OVOS2A0A0G2JMS6 1433 aa15.86■□□□□ 0.13
CHEK1-201ENST00000278916 NCAPD2Q15021 1401 aa15.86■□□□□ 0.13
CHEK1-201ENST00000278916 TATP17735 454 aaPredicted RBP15.85■□□□□ 0.13
CHEK1-201ENST00000278916 SHANK3Q9BYB0 1731 aa15.84■□□□□ 0.13
CHEK1-201ENST00000278916 ZCRB1Q8TBF4 217 aaKnown RBP15.83■□□□□ 0.13
CHEK1-201ENST00000278916 ANP32CO43423 234 aa15.82■□□□□ 0.12
CHEK1-201ENST00000278916 CCDC184Q52MB2 194 aa15.82■□□□□ 0.12
CHEK1-201ENST00000278916 SOCS7O14512 581 aa15.82■□□□□ 0.12
CHEK1-201ENST00000278916 U2AF1L5P0DN76 240 aaPredicted RBP15.82■□□□□ 0.12
CHEK1-201ENST00000278916 U2AF1Q01081 240 aaKnown RBP eCLIP15.82■□□□□ 0.128e-7■□□□□ 8.6
CHEK1-201ENST00000278916 PTF1AQ7RTS3 328 aa15.82■□□□□ 0.12
CHEK1-201ENST00000278916 UPF1Q92900 1129 aaKnown RBP eCLIP15.82■□□□□ 0.12
CHEK1-201ENST00000278916 ACSBG1Q96GR2 724 aa15.82■□□□□ 0.12
CHEK1-201ENST00000278916 TRIM37O94972 964 aa15.81■□□□□ 0.12
CHEK1-201ENST00000278916 KDRP35968 1356 aa15.8■□□□□ 0.12
CHEK1-201ENST00000278916 CYP27B1O15528 508 aa15.8■□□□□ 0.12
CHEK1-201ENST00000278916 FAM196AQ6ZSG2 479 aa15.8■□□□□ 0.12
CHEK1-201ENST00000278916 PKD1L3Q7Z443 1732 aa15.79■□□□□ 0.12
CHEK1-201ENST00000278916 NUDCQ9Y266 331 aa15.79■□□□□ 0.12
CHEK1-201ENST00000278916 KCNQ2O43526 872 aa15.78■□□□□ 0.12
CHEK1-201ENST00000278916 KAT6BQ8WYB5 2073 aa15.78■□□□□ 0.12
CHEK1-201ENST00000278916 PCDH11XQ9BZA7 1347 aa15.78■□□□□ 0.12
CHEK1-201ENST00000278916 PCDH11YQ9BZA8 1340 aa15.78■□□□□ 0.12
CHEK1-201ENST00000278916 PRKAR2BP31323 418 aa15.77■□□□□ 0.12
CHEK1-201ENST00000278916 RSPH6AQ9H0K4 717 aa15.77■□□□□ 0.12
CHEK1-201ENST00000278916 SPG7Q9UQ90 795 aa15.77■□□□□ 0.12
CHEK1-201ENST00000278916 ZNF530Q6P9A1 599 aaPredicted RBP15.77■□□□□ 0.11
CHEK1-201ENST00000278916 SBF2Q86WG5 1849 aa15.76■□□□□ 0.11
CHEK1-201ENST00000278916 DEFB132Q7Z7B7 95 aa15.76■□□□□ 0.11
CHEK1-201ENST00000278916 SYTL4Q96C24 671 aaPredicted RBP15.76■□□□□ 0.11
CHEK1-201ENST00000278916 PHACTR3Q96KR7 559 aa15.76■□□□□ 0.11
CHEK1-201ENST00000278916 PLEKHO1Q53GL0 409 aaPredicted RBP15.75■□□□□ 0.11
CHEK1-201ENST00000278916 DOT1LQ8TEK3 1739 aa15.75■□□□□ 0.11
CHEK1-201ENST00000278916 PHKG2P15735 406 aa15.74■□□□□ 0.11
CHEK1-201ENST00000278916 MTHFSDQ2M296 383 aaKnown RBP15.74■□□□□ 0.11
CHEK1-201ENST00000278916 MIER1Q8N108 512 aa15.74■□□□□ 0.11
CHEK1-201ENST00000278916 TNS1Q9HBL0 1735 aaKnown RBP15.74■□□□□ 0.11
CHEK1-201ENST00000278916 TOGARAM1Q9Y4F4 1720 aa15.73■□□□□ 0.11
CHEK1-201ENST00000278916 PRIM1P49642 420 aaKnown RBP15.73■□□□□ 0.11
CHEK1-201ENST00000278916 CCDC146Q8IYE0 955 aa15.73■□□□□ 0.11
CHEK1-201ENST00000278916 SENP3-EIF4A1A0A087X0R7 540 aa15.72■□□□□ 0.11
CHEK1-201ENST00000278916 APBA3O96018 575 aa15.72■□□□□ 0.11
CHEK1-201ENST00000278916 IFNL2Q8IZJ0 200 aa15.72■□□□□ 0.11
CHEK1-201ENST00000278916 MRS2Q9HD23 443 aa15.72■□□□□ 0.11
CHEK1-201ENST00000278916 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.72■□□□□ 0.113e-6■■□□□ 11.4
CHEK1-201ENST00000278916 SF3B2Q13435 895 aaKnown RBP15.71■□□□□ 0.11
CHEK1-201ENST00000278916 WDR43Q15061 677 aaKnown RBP eCLIP15.71■□□□□ 0.11
CHEK1-201ENST00000278916 AMOTQ4VCS5 1084 aa15.71■□□□□ 0.11
CHEK1-201ENST00000278916 MPRIPQ6WCQ1 1025 aa15.71■□□□□ 0.11
CHEK1-201ENST00000278916 ADAMTS8Q9UP79 889 aa15.71■□□□□ 0.11
CHEK1-201ENST00000278916 EN1Q05925 392 aaPredicted RBP15.71■□□□□ 0.1
CHEK1-201ENST00000278916 C1orf141Q5JVX7 400 aa15.71■□□□□ 0.1
CHEK1-201ENST00000278916 NHSQ6T4R5 1651 aa15.7■□□□□ 0.1
CHEK1-201ENST00000278916 KDM6AO15550 1401 aaPredicted RBP15.7■□□□□ 0.1
CHEK1-201ENST00000278916 FCHSD2O94868 740 aa15.7■□□□□ 0.1
CHEK1-201ENST00000278916 POTEDQ86YR6 584 aa15.7■□□□□ 0.1
CHEK1-201ENST00000278916 BCL9O00512 1426 aa15.69■□□□□ 0.1
CHEK1-201ENST00000278916 BCL11BQ9C0K0 894 aaPredicted RBP15.69■□□□□ 0.1
CHEK1-201ENST00000278916 PLEKHF1Q96S99 279 aa15.68■□□□□ 0.1
CHEK1-201ENST00000278916 LGR6Q9HBX8 967 aa15.68■□□□□ 0.1
CHEK1-201ENST00000278916 BTAF1O14981 1849 aa15.68■□□□□ 0.1
CHEK1-201ENST00000278916 NKX1-1Q15270 411 aaPredicted RBP15.68■□□□□ 0.1
CHEK1-201ENST00000278916 EZH2Q15910 746 aaKnown RBP15.68■□□□□ 0.1
CHEK1-201ENST00000278916 ITGB4P16144 1822 aa15.67■□□□□ 0.1
CHEK1-201ENST00000278916 AKAP4Q5JQC9 854 aa15.67■□□□□ 0.1
CHEK1-201ENST00000278916 BAG6P46379 1132 aa15.66■□□□□ 0.1
CHEK1-201ENST00000278916 CCDC125Q86Z20 511 aa15.66■□□□□ 0.1
CHEK1-201ENST00000278916 RRP7AQ9Y3A4 280 aaKnown RBP15.66■□□□□ 0.1
CHEK1-201ENST00000278916 SRCAPQ6ZRS2 3230 aa15.66■□□□□ 0.1
CHEK1-201ENST00000278916 KCNQ4P56696 695 aa15.65■□□□□ 0.1
CHEK1-201ENST00000278916 DCTN1Q14203 1278 aa15.65■□□□□ 0.1
CHEK1-201ENST00000278916 GAS2L2Q8NHY3 880 aa15.65■□□□□ 0.1
CHEK1-201ENST00000278916 MAPK8IP3Q9UPT6 1336 aa15.65■□□□□ 0.1
CHEK1-201ENST00000278916 VIRMAQ69YN4 1812 aaKnown RBP15.65■□□□□ 0.1
CHEK1-201ENST00000278916 PIGBQ92521 554 aa15.65■□□□□ 0.1
CHEK1-201ENST00000278916 DCAF5Q96JK2 942 aa15.65■□□□□ 0.1
CHEK1-201ENST00000278916 MAP3K5Q99683 1374 aa15.65■□□□□ 0.1
CHEK1-201ENST00000278916 PLEKHG2Q9H7P9 1386 aa15.65■□□□□ 0.1
CHEK1-201ENST00000278916 NEUROD2Q15784 382 aa15.64■□□□□ 0.09
CHEK1-201ENST00000278916 MCM10Q7L590 875 aa15.64■□□□□ 0.09
CHEK1-201ENST00000278916 PNISRQ8TF01 805 aaKnown RBP15.64■□□□□ 0.09
CHEK1-201ENST00000278916 TMOD3Q9NYL9 352 aa15.64■□□□□ 0.09
CHEK1-201ENST00000278916 SCN11AQ9UI33 1791 aa15.64■□□□□ 0.09
CHEK1-201ENST00000278916 GNAT3A8MTJ3 354 aa15.63■□□□□ 0.09
CHEK1-201ENST00000278916 RNMTO43148 476 aaKnown RBP15.63■□□□□ 0.09
CHEK1-201ENST00000278916 NEFMP07197 916 aa15.63■□□□□ 0.09
CHEK1-201ENST00000278916 HSP90AB1P08238 724 aaKnown RBP15.63■□□□□ 0.09
CHEK1-201ENST00000278916 FAM9BQ8IZU0 186 aa15.63■□□□□ 0.09
CHEK1-201ENST00000278916 CAMKK2Q96RR4 588 aa15.63■□□□□ 0.09
CHEK1-201ENST00000278916 DLG5Q8TDM6 1919 aa15.63■□□□□ 0.09
CHEK1-201ENST00000278916 CABP4P57796 275 aa15.63■□□□□ 0.09
CHEK1-201ENST00000278916 NFATC2IPQ8NCF5 419 aa15.63■□□□□ 0.09
CHEK1-201ENST00000278916 IL17REQ8NFR9 667 aa15.63■□□□□ 0.09
CHEK1-201ENST00000278916 THUMPD2Q9BTF0 503 aaKnown RBP15.63■□□□□ 0.09
CHEK1-201ENST00000278916 PROM2Q8N271 834 aa15.62■□□□□ 0.09
CHEK1-201ENST00000278916 ASAP1Q9ULH1 1129 aa15.62■□□□□ 0.09
CHEK1-201ENST00000278916 NFE2L2Q16236 605 aa15.61■□□□□ 0.09
CHEK1-201ENST00000278916 ERVV-2B6SEH9 535 aa15.6■□□□□ 0.09
CHEK1-201ENST00000278916 RUNDC1Q96C34 613 aa15.6■□□□□ 0.09
CHEK1-201ENST00000278916 APAF1O14727 1248 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms