RNA–Protein interactions for RNA: ENST00000275603.8

CCT6A-201, Transcript of chaperonin containing TCP1 subunit 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT6A, Length 2,719 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT6A-201ENST00000275603 FOXD4L3Q6VB84 417 aaPredicted RBP20.45■□□□□ 0.86
CCT6A-201ENST00000275603 GGNBP2Q9H3C7 697 aa20.45■□□□□ 0.86
CCT6A-201ENST00000275603 PPIP5K1Q6PFW1 1433 aa20.45■□□□□ 0.86
CCT6A-201ENST00000275603 KNDC1Q76NI1 1749 aa20.44■□□□□ 0.86
CCT6A-201ENST00000275603 TMEM63CQ9P1W3 806 aa20.44■□□□□ 0.86
CCT6A-201ENST00000275603 USP32Q8NFA0 1604 aa20.44■□□□□ 0.86
CCT6A-201ENST00000275603 ZNF445P59923 1031 aa20.43■□□□□ 0.86
CCT6A-201ENST00000275603 PLEKHF1Q96S99 279 aa20.43■□□□□ 0.86
CCT6A-201ENST00000275603 APBB1O00213 710 aa20.43■□□□□ 0.86
CCT6A-201ENST00000275603 OTUD7AQ8TE49 926 aaPredicted RBP20.43■□□□□ 0.86
CCT6A-201ENST00000275603 CPS1P31327 1500 aa20.42■□□□□ 0.86
CCT6A-201ENST00000275603 ANKLE2Q86XL3 938 aa20.42■□□□□ 0.86
CCT6A-201ENST00000275603 ZNF830Q96NB3 372 aaPredicted RBP20.42■□□□□ 0.86
CCT6A-201ENST00000275603 ZDHHC9Q9Y397 364 aa20.42■□□□□ 0.86
CCT6A-201ENST00000275603 ANKRD36BQ8N2N9 1353 aa20.42■□□□□ 0.86
CCT6A-201ENST00000275603 ZNF142P52746 1687 aaPredicted RBP20.42■□□□□ 0.86
CCT6A-201ENST00000275603 ROBO2Q9HCK4 1378 aa20.42■□□□□ 0.86
CCT6A-201ENST00000275603 PDLIM2Q96JY6 352 aa20.41■□□□□ 0.86
CCT6A-201ENST00000275603 NCBP3Q53F19 620 aaKnown RBP20.41■□□□□ 0.86
CCT6A-201ENST00000275603 C17orf53Q8N3J3 647 aaPredicted RBP20.41■□□□□ 0.86
CCT6A-201ENST00000275603 TSPYL6Q8N831 410 aa20.41■□□□□ 0.86
CCT6A-201ENST00000275603 ZNF500O60304 480 aaPredicted RBP20.4■□□□□ 0.86
CCT6A-201ENST00000275603 ZKSCAN5Q9Y2L8 839 aa20.4■□□□□ 0.86
CCT6A-201ENST00000275603 KIF16BQ96L93 1317 aa20.4■□□□□ 0.86
CCT6A-201ENST00000275603 PTPRUQ92729 1446 aa20.4■□□□□ 0.86
CCT6A-201ENST00000275603 WASLO00401 505 aaPredicted RBP20.4■□□□□ 0.86
CCT6A-201ENST00000275603 ZBTB7BO15156 539 aaPredicted RBP20.4■□□□□ 0.86
CCT6A-201ENST00000275603 AMOTL2Q9Y2J4 779 aa20.4■□□□□ 0.86
CCT6A-201ENST00000275603 ADGRB2O60241 1585 aa20.4■□□□□ 0.86
CCT6A-201ENST00000275603 NSD2O96028 1365 aa20.38■□□□□ 0.85
CCT6A-201ENST00000275603 DIP2AQ14689 1571 aa20.38■□□□□ 0.85
CCT6A-201ENST00000275603 CT47B1P0C2W7 299 aaPredicted RBP20.38■□□□□ 0.85
CCT6A-201ENST00000275603 CLEC17AQ6ZS10 378 aa20.37■□□□□ 0.85
CCT6A-201ENST00000275603 TERF2IPQ9NYB0 399 aa20.37■□□□□ 0.85
CCT6A-201ENST00000275603 CABP1Q9NZU7 370 aa20.37■□□□□ 0.85
CCT6A-201ENST00000275603 CYP2E1P05181 493 aaPredicted RBP20.37■□□□□ 0.85
CCT6A-201ENST00000275603 NOL8Q76FK4 1167 aaKnown RBP20.37■□□□□ 0.85
CCT6A-201ENST00000275603 A0A1W2PP64 1363 aa20.36■□□□□ 0.85
CCT6A-201ENST00000275603 IBTKQ9P2D0 1353 aaPredicted RBP20.35■□□□□ 0.85
CCT6A-201ENST00000275603 CDC45O75419 566 aa20.35■□□□□ 0.85
CCT6A-201ENST00000275603 PTMSP20962 102 aa20.35■□□□□ 0.85
CCT6A-201ENST00000275603 SMARCA5O60264 1052 aaPredicted RBP20.34■□□□□ 0.85
CCT6A-201ENST00000275603 GDPD2Q9HCC8 539 aa20.34■□□□□ 0.85
CCT6A-201ENST00000275603 IPO8O15397 1037 aaKnown RBP20.33■□□□□ 0.85
CCT6A-201ENST00000275603 HDGFL2Q7Z4V5 671 aaPredicted RBP20.33■□□□□ 0.85
CCT6A-201ENST00000275603 PLEKHM2Q8IWE5 1019 aa20.33■□□□□ 0.85
CCT6A-201ENST00000275603 CD163L1Q9NR16 1453 aa20.33■□□□□ 0.84
CCT6A-201ENST00000275603 CBX1P83916 185 aa20.32■□□□□ 0.84
CCT6A-201ENST00000275603 USP26Q9BXU7 913 aa20.32■□□□□ 0.84
CCT6A-201ENST00000275603 PIK3R4Q99570 1358 aa20.32■□□□□ 0.84
CCT6A-201ENST00000275603 TERF1P54274 439 aa20.32■□□□□ 0.84
CCT6A-201ENST00000275603 DNTTIP2Q5QJE6 756 aaKnown RBP20.32■□□□□ 0.84
CCT6A-201ENST00000275603 NUDT16Q96DE0 195 aaKnown RBP20.32■□□□□ 0.84
CCT6A-201ENST00000275603 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.32■□□□□ 0.843e-6■□□□□ 8.4
CCT6A-201ENST00000275603 PTMAP06454 111 aaKnown RBP20.31■□□□□ 0.84
CCT6A-201ENST00000275603 LRSAM1Q6UWE0 723 aa20.31■□□□□ 0.84
CCT6A-201ENST00000275603 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.31■□□□□ 0.84
CCT6A-201ENST00000275603 PTCH1Q13635 1447 aa20.3■□□□□ 0.84
CCT6A-201ENST00000275603 DTNBO60941 627 aa20.3■□□□□ 0.84
CCT6A-201ENST00000275603 NUCB2P80303 420 aa20.3■□□□□ 0.84
CCT6A-201ENST00000275603 DYNC1I1O14576 645 aa20.3■□□□□ 0.84
CCT6A-201ENST00000275603 IGSF3O75054 1194 aa20.3■□□□□ 0.84
CCT6A-201ENST00000275603 SASS6Q6UVJ0 657 aa20.3■□□□□ 0.84
CCT6A-201ENST00000275603 ZNF710Q8N1W2 664 aa20.3■□□□□ 0.84
CCT6A-201ENST00000275603 COL3A1P02461 1466 aaPredicted RBP20.3■□□□□ 0.84
CCT6A-201ENST00000275603 HMOX1P09601 288 aa20.29■□□□□ 0.84
CCT6A-201ENST00000275603 RABEP1Q15276 862 aa20.29■□□□□ 0.84
CCT6A-201ENST00000275603 HS1BP3Q53T59 392 aa20.29■□□□□ 0.84
CCT6A-201ENST00000275603 GCC1Q96CN9 775 aa20.29■□□□□ 0.84
CCT6A-201ENST00000275603 CCDC61Q9Y6R9 512 aa20.29■□□□□ 0.84
CCT6A-201ENST00000275603 KCNA6P17658 529 aa20.29■□□□□ 0.84
CCT6A-201ENST00000275603 PHACTR3Q96KR7 559 aa20.28■□□□□ 0.84
CCT6A-201ENST00000275603 MRPL50Q8N5N7 158 aaKnown RBP20.27■□□□□ 0.84
CCT6A-201ENST00000275603 MAP7D2Q96T17 732 aa20.27■□□□□ 0.84
CCT6A-201ENST00000275603 NCKAP5LQ9HCH0 1330 aa20.27■□□□□ 0.84
CCT6A-201ENST00000275603 FYB1O15117 783 aa20.27■□□□□ 0.84
CCT6A-201ENST00000275603 TTC12Q9H892 705 aaPredicted RBP20.27■□□□□ 0.84
CCT6A-201ENST00000275603 ATP7BP35670 1465 aa20.27■□□□□ 0.83
CCT6A-201ENST00000275603 XRN1Q8IZH2 1706 aaKnown RBP20.27■□□□□ 0.83
CCT6A-201ENST00000275603 IL16Q14005 1332 aa20.27■□□□□ 0.83
CCT6A-201ENST00000275603 VAMP4O75379 141 aa20.26■□□□□ 0.83
CCT6A-201ENST00000275603 TSHZ3Q63HK5 1081 aa20.26■□□□□ 0.83
CCT6A-201ENST00000275603 SMAP1Q8IYB5 467 aaPredicted RBP20.26■□□□□ 0.83
CCT6A-201ENST00000275603 GADD45BO75293 160 aaPredicted RBP20.26■□□□□ 0.83
CCT6A-201ENST00000275603 ZSCAN20P17040 1043 aaPredicted RBP20.26■□□□□ 0.83
CCT6A-201ENST00000275603 PRR36Q9H6K5 1346 aa20.26■□□□□ 0.83
CCT6A-201ENST00000275603 NPHP4O75161 1426 aaPredicted RBP20.25■□□□□ 0.83
CCT6A-201ENST00000275603 SPDYE4A6NLX3 237 aa20.25■□□□□ 0.83
CCT6A-201ENST00000275603 SDSP20132 328 aa20.25■□□□□ 0.83
CCT6A-201ENST00000275603 CCDC39Q9UFE4 941 aa20.25■□□□□ 0.83
CCT6A-201ENST00000275603 PRKAR2BP31323 418 aa20.25■□□□□ 0.83
CCT6A-201ENST00000275603 ATP2B3Q16720 1220 aa20.25■□□□□ 0.83
CCT6A-201ENST00000275603 TTC22Q5TAA0 569 aa20.25■□□□□ 0.83
CCT6A-201ENST00000275603 KRT24Q2M2I5 525 aa20.23■□□□□ 0.83
CCT6A-201ENST00000275603 CPSF1Q10570 1443 aaKnown RBP20.23■□□□□ 0.83
CCT6A-201ENST00000275603 NUTM2FA1L443 756 aa20.23■□□□□ 0.83
CCT6A-201ENST00000275603 CCDC94Q9BW85 323 aaPredicted RBP20.23■□□□□ 0.83
CCT6A-201ENST00000275603 DIAPH1O60610 1272 aaKnown RBP20.22■□□□□ 0.83
CCT6A-201ENST00000275603 CSPP1Q1MSJ5 1256 aa20.22■□□□□ 0.83
CCT6A-201ENST00000275603 ALDH1L2Q3SY69 923 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms