RNA–Protein interactions for RNA: ENST00000274721.7

GFRA3-201, Transcript of GDNF family receptor alpha 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GFRA3, Length 2,039 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3-201ENST00000274721 NBPF6Q5VWK0 638 aa27.34■■□□□ 1.97
GFRA3-201ENST00000274721 FTSJ3Q8IY81 847 aaKnown RBP27.34■■□□□ 1.97
GFRA3-201ENST00000274721 NBPF4Q96M43 638 aa27.34■■□□□ 1.97
GFRA3-201ENST00000274721 RTF1Q92541 710 aaKnown RBP27.34■■□□□ 1.97
GFRA3-201ENST00000274721 NPHP3Q7Z494 1330 aa27.34■■□□□ 1.97
GFRA3-201ENST00000274721 MRPL50Q8N5N7 158 aaKnown RBP27.33■■□□□ 1.97
GFRA3-201ENST00000274721 ELL2O00472 640 aaPredicted RBP27.32■■□□□ 1.96
GFRA3-201ENST00000274721 DDX17Q92841 729 aaKnown RBP27.32■■□□□ 1.96
GFRA3-201ENST00000274721 KIAA0232Q92628 1395 aa27.31■■□□□ 1.96
GFRA3-201ENST00000274721 IGHDP01880 384 aa27.31■■□□□ 1.96
GFRA3-201ENST00000274721 ARHGAP45Q92619 1136 aa27.31■■□□□ 1.96
GFRA3-201ENST00000274721 MED1Q15648 1581 aaPredicted RBP27.3■■□□□ 1.96
GFRA3-201ENST00000274721 USHBP1Q8N6Y0 703 aa27.3■■□□□ 1.96
GFRA3-201ENST00000274721 ZNF335Q9H4Z2 1342 aaPredicted RBP27.3■■□□□ 1.96
GFRA3-201ENST00000274721 GNAT3A8MTJ3 354 aa27.29■■□□□ 1.96
GFRA3-201ENST00000274721 NCAPD2Q15021 1401 aa27.29■■□□□ 1.96
GFRA3-201ENST00000274721 PXDNQ92626 1479 aa27.28■■□□□ 1.96
GFRA3-201ENST00000274721 ZBTB7CA1YPR0 619 aa27.28■■□□□ 1.96
GFRA3-201ENST00000274721 PCDHB15Q9Y5E8 787 aa27.28■■□□□ 1.96
GFRA3-201ENST00000274721 DDX19BQ9UMR2 479 aa27.27■■□□□ 1.96
GFRA3-201ENST00000274721 AXIN2Q9Y2T1 843 aa27.27■■□□□ 1.96
GFRA3-201ENST00000274721 HAP1P54257 671 aaPredicted RBP27.26■■□□□ 1.95
GFRA3-201ENST00000274721 MAP3K5Q99683 1374 aa27.26■■□□□ 1.95
GFRA3-201ENST00000274721 LRRC37A3O60309 1634 aa27.25■■□□□ 1.95
GFRA3-201ENST00000274721 RGPD2P0DJD1 1756 aa27.25■■□□□ 1.95
GFRA3-201ENST00000274721 BRINP3Q76B58 766 aa27.25■■□□□ 1.95
GFRA3-201ENST00000274721 TMEM57Q8N5G2 664 aa27.25■■□□□ 1.95
GFRA3-201ENST00000274721 LRRC59Q96AG4 307 aaKnown RBP27.25■■□□□ 1.95
GFRA3-201ENST00000274721 TNS3Q68CZ2 1445 aa27.25■■□□□ 1.95
GFRA3-201ENST00000274721 IL17REQ8NFR9 667 aa27.24■■□□□ 1.95
GFRA3-201ENST00000274721 SPATA31A3Q5VYP0 1347 aa27.24■■□□□ 1.95
GFRA3-201ENST00000274721 PLEKHG5O94827 1062 aa27.24■■□□□ 1.95
GFRA3-201ENST00000274721 SKAP1Q86WV1 359 aa27.24■■□□□ 1.95
GFRA3-201ENST00000274721 ANKRD24Q8TF21 1146 aa27.24■■□□□ 1.95
GFRA3-201ENST00000274721 KRT24Q2M2I5 525 aa27.23■■□□□ 1.95
GFRA3-201ENST00000274721 ITPRIPQ8IWB1 547 aa27.22■■□□□ 1.95
GFRA3-201ENST00000274721 MIS18AQ9NYP9 233 aa27.21■■□□□ 1.95
GFRA3-201ENST00000274721 TSPYL4Q9UJ04 414 aa27.21■■□□□ 1.95
GFRA3-201ENST00000274721 ZC3H6P61129 1189 aaKnown RBP27.21■■□□□ 1.95
GFRA3-201ENST00000274721 BABAM1Q9NWV8 329 aa27.21■■□□□ 1.95
GFRA3-201ENST00000274721 SLAIN2Q9P270 581 aa27.21■■□□□ 1.95
GFRA3-201ENST00000274721 CAMTA1Q9Y6Y1 1673 aa27.2■■□□□ 1.95
GFRA3-201ENST00000274721 ZBTB40Q9NUA8 1239 aa27.19■■□□□ 1.94
GFRA3-201ENST00000274721 ERBB3P21860 1342 aa27.19■■□□□ 1.94
GFRA3-201ENST00000274721 CEMIPQ8WUJ3 1361 aa27.18■■□□□ 1.94
GFRA3-201ENST00000274721 ABCC4O15439 1325 aa27.17■■□□□ 1.94
GFRA3-201ENST00000274721 RGPD5Q99666 1765 aa27.17■■□□□ 1.94
GFRA3-201ENST00000274721 AMOTQ4VCS5 1084 aa27.16■■□□□ 1.94
GFRA3-201ENST00000274721 TAF7Q15545 349 aaPredicted RBP27.16■■□□□ 1.94
GFRA3-201ENST00000274721 PLEKHO1Q53GL0 409 aaPredicted RBP27.16■■□□□ 1.94
GFRA3-201ENST00000274721 RWDD1Q9H446 243 aaPredicted RBP27.16■■□□□ 1.94
GFRA3-201ENST00000274721 COL18A1P39060 1754 aa27.15■■□□□ 1.94
GFRA3-201ENST00000274721 CRYBG1Q9Y4K1 1723 aa27.15■■□□□ 1.94
GFRA3-201ENST00000274721 API5Q9BZZ5 524 aaKnown RBP27.15■■□□□ 1.94
GFRA3-201ENST00000274721 SOS2Q07890 1332 aaPredicted RBP27.15■■□□□ 1.94
GFRA3-201ENST00000274721 CABLES1Q8TDN4 633 aa27.14■■□□□ 1.94
GFRA3-201ENST00000274721 LMO7Q8WWI1 1683 aa27.14■■□□□ 1.93
GFRA3-201ENST00000274721 PDE4AP27815 886 aa27.13■■□□□ 1.93
GFRA3-201ENST00000274721 AKAP4Q5JQC9 854 aa27.13■■□□□ 1.93
GFRA3-201ENST00000274721 ABCC6O95255 1503 aa27.13■■□□□ 1.93
GFRA3-201ENST00000274721 ZBTB7BO15156 539 aaPredicted RBP27.12■■□□□ 1.93
GFRA3-201ENST00000274721 BACH2Q9BYV9 841 aa27.12■■□□□ 1.93
GFRA3-201ENST00000274721 CPDO75976 1380 aa27.12■■□□□ 1.93
GFRA3-201ENST00000274721 HDAC1Q13547 482 aaPredicted RBP27.12■■□□□ 1.93
GFRA3-201ENST00000274721 SOS1Q07889 1333 aaPredicted RBP27.1■■□□□ 1.93
GFRA3-201ENST00000274721 CHMP4BQ9H444 224 aaKnown RBP27.1■■□□□ 1.93
GFRA3-201ENST00000274721 ZNF530Q6P9A1 599 aaPredicted RBP27.09■■□□□ 1.93
GFRA3-201ENST00000274721 LGR6Q9HBX8 967 aa27.09■■□□□ 1.93
GFRA3-201ENST00000274721 RGS12O14924 1447 aa27.08■■□□□ 1.93
GFRA3-201ENST00000274721 PTPRCP08575 1304 aa27.08■■□□□ 1.93
GFRA3-201ENST00000274721 SLC4A2P04920 1241 aa27.06■■□□□ 1.92
GFRA3-201ENST00000274721 RGS3P49796 1198 aa27.06■■□□□ 1.92
GFRA3-201ENST00000274721 INTS3Q68E01 1043 aaKnown RBP27.06■■□□□ 1.92
GFRA3-201ENST00000274721 C1orf141Q5JVX7 400 aa27.04■■□□□ 1.92
GFRA3-201ENST00000274721 OVOS2A0A0G2JMS6 1433 aa27.04■■□□□ 1.92
GFRA3-201ENST00000274721 CHRNA2Q15822 529 aa27.03■■□□□ 1.92
GFRA3-201ENST00000274721 NLRP2Q9NX02 1062 aa27.03■■□□□ 1.92
GFRA3-201ENST00000274721 FAM208AQ9UK61 1670 aaKnown RBP27.03■■□□□ 1.92
GFRA3-201ENST00000274721 RNMTO43148 476 aaKnown RBP27.02■■□□□ 1.92
GFRA3-201ENST00000274721 MPRIPQ6WCQ1 1025 aa27.02■■□□□ 1.92
GFRA3-201ENST00000274721 PDZRN3Q9UPQ7 1066 aa27.02■■□□□ 1.92
GFRA3-201ENST00000274721 PLEKHG2Q9H7P9 1386 aa27.01■■□□□ 1.92
GFRA3-201ENST00000274721 SMC5Q8IY18 1101 aa27.01■■□□□ 1.91
GFRA3-201ENST00000274721 CCDC30Q5VVM6 783 aa27■■□□□ 1.91
GFRA3-201ENST00000274721 RAPGEF4Q8WZA2 1011 aa27■■□□□ 1.91
GFRA3-201ENST00000274721 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27■■□□□ 1.91
GFRA3-201ENST00000274721 CACNA1FO60840 1977 aa26.99■■□□□ 1.91
GFRA3-201ENST00000274721 KDM3BQ7LBC6 1761 aa26.99■■□□□ 1.91
GFRA3-201ENST00000274721 EIF4A1P60842 406 aaKnown RBP26.99■■□□□ 1.91
GFRA3-201ENST00000274721 TEFQ10587 303 aa26.99■■□□□ 1.91
GFRA3-201ENST00000274721 G2E3Q7L622 706 aa26.99■■□□□ 1.91
GFRA3-201ENST00000274721 STK31Q9BXU1 1019 aa26.98■■□□□ 1.91
GFRA3-201ENST00000274721 ADAMTS7Q9UKP4 1686 aa26.98■■□□□ 1.91
GFRA3-201ENST00000274721 FAM161AQ3B820 660 aa26.97■■□□□ 1.91
GFRA3-201ENST00000274721 NHSL1Q5SYE7 1610 aa26.97■■□□□ 1.91
GFRA3-201ENST00000274721 CSB-PGBD3P0DP91 1061 aa26.97■■□□□ 1.91
GFRA3-201ENST00000274721 VIRMAQ69YN4 1812 aaKnown RBP26.96■■□□□ 1.91
GFRA3-201ENST00000274721 HOXB7P09629 217 aa26.96■■□□□ 1.91
GFRA3-201ENST00000274721 C8orf34Q49A92 452 aa26.96■■□□□ 1.91
GFRA3-201ENST00000274721 TATP17735 454 aaPredicted RBP26.95■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms