RNA–Protein interactions for RNA: ENST00000271688.10

CERS2-201, Transcript of ceramide synthase 2, human

APPRIS P1 TSL 5 BASIC

Gene CERS2, Length 2,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CERS2-201	ENST00000271688	ARHGEF10	O15013	1369 aa		34.37	■■■■□ 3.09
CERS2-201	ENST00000271688	KIAA0232	Q92628	1395 aa		34.37	■■■■□ 3.09
CERS2-201	ENST00000271688	EYA1	Q99502	592 aa		34.36	■■■■□ 3.09
CERS2-201	ENST00000271688	FLT4	P35916	1363 aa		34.36	■■■■□ 3.09
CERS2-201	ENST00000271688	TBC1D9	Q6ZT07	1266 aa		34.36	■■■■□ 3.09
CERS2-201	ENST00000271688	SBNO1	A3KN83	1393 aa		34.35	■■■■□ 3.09
CERS2-201	ENST00000271688	KIF24	Q5T7B8	1368 aa		34.35	■■■■□ 3.09
CERS2-201	ENST00000271688	SLC4A2	P04920	1241 aa		34.35	■■■■□ 3.09
CERS2-201	ENST00000271688	BRPF3	Q9ULD4	1205 aa		34.35	■■■■□ 3.09
CERS2-201	ENST00000271688	HSCB	Q8IWL3	235 aa		34.34	■■■■□ 3.09
CERS2-201	ENST00000271688	THEMIS	Q8N1K5	641 aa	Predicted RBP	34.34	■■■■□ 3.09
CERS2-201	ENST00000271688	RTF1	Q92541	710 aa	Known RBP	34.34	■■■■□ 3.09
CERS2-201	ENST00000271688	DCTPP1	Q9H773	170 aa		34.34	■■■■□ 3.09
CERS2-201	ENST00000271688	MSH6	P52701	1360 aa		34.34	■■■■□ 3.09
CERS2-201	ENST00000271688	HAP1	P54257	671 aa	Predicted RBP	34.33	■■■■□ 3.09
CERS2-201	ENST00000271688	NLRP6	P59044	892 aa		34.33	■■■■□ 3.09
CERS2-201	ENST00000271688	C16orf71	Q8IYS4	520 aa	Predicted RBP	34.33	■■■■□ 3.09
CERS2-201	ENST00000271688	TSPYL4	Q9UJ04	414 aa		34.33	■■■■□ 3.09
CERS2-201	ENST00000271688	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	34.32	■■■■□ 3.09
CERS2-201	ENST00000271688	PIK3C2A	O00443	1686 aa		34.31	■■■■□ 3.08
CERS2-201	ENST00000271688	KCNA6	P17658	529 aa		34.31	■■■■□ 3.08
CERS2-201	ENST00000271688	MEIS3	Q99687	375 aa		34.31	■■■■□ 3.08
CERS2-201	ENST00000271688	ATP10D	Q9P241	1426 aa		34.31	■■■■□ 3.08
CERS2-201	ENST00000271688	FER1L4	A9Z1Z3	1794 aa		34.3	■■■■□ 3.08
CERS2-201	ENST00000271688	G2E3	Q7L622	706 aa		34.3	■■■■□ 3.08
CERS2-201	ENST00000271688	PLEKHM2	Q8IWE5	1019 aa		34.3	■■■■□ 3.08
CERS2-201	ENST00000271688	GSPT1	P15170	499 aa	Known RBP	34.3	■■■■□ 3.08
CERS2-201	ENST00000271688	ANKRD44	Q8N8A2	993 aa		34.3	■■■■□ 3.08
CERS2-201	ENST00000271688	APBB1	O00213	710 aa		34.28	■■■■□ 3.08
CERS2-201	ENST00000271688	CEP85	Q6P2H3	762 aa		34.28	■■■■□ 3.08
CERS2-201	ENST00000271688	PTPRC	P08575	1304 aa		34.28	■■■■□ 3.08
CERS2-201	ENST00000271688	KIF2C	Q99661	725 aa		34.28	■■■■□ 3.08
CERS2-201	ENST00000271688	IGSF1	Q8N6C5	1336 aa		34.28	■■■■□ 3.08
CERS2-201	ENST00000271688	KDR	P35968	1356 aa		34.27	■■■■□ 3.08
CERS2-201	ENST00000271688	RTN4	Q9NQC3	1192 aa	Known RBP	34.27	■■■■□ 3.08
CERS2-201	ENST00000271688		F6X3S4	739 aa		34.26	■■■■□ 3.08
CERS2-201	ENST00000271688	OTUD7A	Q8TE49	926 aa	Predicted RBP	34.26	■■■■□ 3.08
CERS2-201	ENST00000271688	CHMP5	Q9NZZ3	219 aa		34.26	■■■■□ 3.08
CERS2-201	ENST00000271688	RTL1	A6NKG5	1358 aa		34.26	■■■■□ 3.08
CERS2-201	ENST00000271688	SLC4A10	Q6U841	1118 aa		34.25	■■■■□ 3.07
CERS2-201	ENST00000271688	SMARCA5	O60264	1052 aa	Predicted RBP	34.24	■■■■□ 3.07
CERS2-201	ENST00000271688	RPAP2	Q8IXW5	612 aa	Predicted RBP	34.23	■■■■□ 3.07
CERS2-201	ENST00000271688	LTV1	Q96GA3	475 aa	Predicted RBP	34.23	■■■■□ 3.07
CERS2-201	ENST00000271688	CDC45	O75419	566 aa		34.22	■■■■□ 3.07
CERS2-201	ENST00000271688	GAS2L2	Q8NHY3	880 aa		34.22	■■■■□ 3.07
CERS2-201	ENST00000271688	XRN1	Q8IZH2	1706 aa	Known RBP	34.21	■■■■□ 3.07
CERS2-201	ENST00000271688	SNX21	Q969T3	373 aa		34.21	■■■■□ 3.07
CERS2-201	ENST00000271688	RBM42	Q9BTD8	480 aa	Known RBP	34.21	■■■■□ 3.07
CERS2-201	ENST00000271688	CD2BP2	O95400	341 aa	Known RBP	34.21	■■■■□ 3.07
CERS2-201	ENST00000271688	HOXC9	P31274	260 aa		34.21	■■■■□ 3.07
CERS2-201	ENST00000271688	MCM4	P33991	863 aa		34.2	■■■■□ 3.07
CERS2-201	ENST00000271688	ABTB2	Q8N961	1025 aa		34.2	■■■■□ 3.06
CERS2-201	ENST00000271688	TTC22	Q5TAA0	569 aa		34.19	■■■■□ 3.06
CERS2-201	ENST00000271688	NECTIN2	Q92692	538 aa		34.19	■■■■□ 3.06
CERS2-201	ENST00000271688	RBM33	Q96EV2	1170 aa	Known RBP	34.19	■■■■□ 3.06
CERS2-201	ENST00000271688	C14orf37	Q86TY3	774 aa		34.18	■■■■□ 3.06
CERS2-201	ENST00000271688	HSP90AB1	P08238	724 aa	Known RBP	34.16	■■■■□ 3.06
CERS2-201	ENST00000271688	NCOA3	Q9Y6Q9	1424 aa		34.16	■■■■□ 3.06
CERS2-201	ENST00000271688	MARF1	Q9Y4F3	1742 aa	Known RBP	34.15	■■■■□ 3.06
CERS2-201	ENST00000271688	GNAT3	A8MTJ3	354 aa		34.14	■■■■□ 3.06
CERS2-201	ENST00000271688	USHBP1	Q8N6Y0	703 aa		34.13	■■■■□ 3.05
CERS2-201	ENST00000271688	FOXD4L1	Q9NU39	408 aa		34.13	■■■■□ 3.05
CERS2-201	ENST00000271688	ANKAR	Q7Z5J8	1434 aa		34.13	■■■■□ 3.05
CERS2-201	ENST00000271688	DDIT3	P35638	169 aa		34.12	■■■■□ 3.05
CERS2-201	ENST00000271688	IL17RE	Q8NFR9	667 aa		34.1	■■■■□ 3.05
CERS2-201	ENST00000271688	STK31	Q9BXU1	1019 aa		34.1	■■■■□ 3.05
CERS2-201	ENST00000271688	NWD1	Q149M9	1564 aa		34.1	■■■■□ 3.05
CERS2-201	ENST00000271688	CCT4	P50991	539 aa	Known RBP	34.09	■■■■□ 3.05
CERS2-201	ENST00000271688	GZF1	Q9H116	711 aa	Predicted RBP	34.08	■■■■□ 3.05
CERS2-201	ENST00000271688	SDS	P20132	328 aa		34.08	■■■■□ 3.05
CERS2-201	ENST00000271688	HTATSF1	O43719	755 aa	Known RBP	34.07	■■■■□ 3.04
CERS2-201	ENST00000271688	FLII	Q13045	1269 aa		34.06	■■■■□ 3.04
CERS2-201	ENST00000271688	FKBP5	Q13451	457 aa	Predicted RBP	34.06	■■■■□ 3.04
CERS2-201	ENST00000271688	SETD1B	Q9UPS6	1966 aa	Known RBP	34.06	■■■■□ 3.04
CERS2-201	ENST00000271688	ARX	Q96QS3	562 aa		34.05	■■■■□ 3.04
CERS2-201	ENST00000271688	HSP90AA1	P07900	732 aa	Known RBP	34.04	■■■■□ 3.04
CERS2-201	ENST00000271688	LRRC37A3	O60309	1634 aa		34.04	■■■■□ 3.04
CERS2-201	ENST00000271688		K7ELQ4	463 aa	Predicted RBP	34.04	■■■■□ 3.04
CERS2-201	ENST00000271688	PHF8	Q9UPP1	1060 aa		34.04	■■■■□ 3.04
CERS2-201	ENST00000271688	MAP3K5	Q99683	1374 aa		34.04	■■■■□ 3.04
CERS2-201	ENST00000271688	HMMR	O75330	724 aa		34.03	■■■■□ 3.04
CERS2-201	ENST00000271688	CCDC30	Q5VVM6	783 aa		34.03	■■■■□ 3.04
CERS2-201	ENST00000271688	EXOC6B	Q9Y2D4	811 aa		34.02	■■■■□ 3.04
CERS2-201	ENST00000271688	TRAK2	O60296	914 aa		34.01	■■■■□ 3.04
CERS2-201	ENST00000271688	GNAI2	P04899	355 aa		34.01	■■■■□ 3.04
CERS2-201	ENST00000271688	TNPO1	Q92973	898 aa	Known RBP	34.01	■■■■□ 3.04
CERS2-201	ENST00000271688	ZBTB7C	A1YPR0	619 aa		34.01	■■■■□ 3.03
CERS2-201	ENST00000271688	USP26	Q9BXU7	913 aa		34	■■■■□ 3.03
CERS2-201	ENST00000271688	TAF7	Q15545	349 aa	Predicted RBP	34	■■■■□ 3.03
CERS2-201	ENST00000271688	FAM208A	Q9UK61	1670 aa	Known RBP	33.99	■■■■□ 3.03
CERS2-201	ENST00000271688	TRH	P20396	242 aa	Predicted RBP	33.98	■■■■□ 3.03
CERS2-201	ENST00000271688	TSHZ3	Q63HK5	1081 aa		33.97	■■■■□ 3.03
CERS2-201	ENST00000271688	PLEKHG5	O94827	1062 aa		33.97	■■■■□ 3.03
CERS2-201	ENST00000271688	LTN1	O94822	1766 aa		33.96	■■■■□ 3.03
CERS2-201	ENST00000271688	PNMA6E	A0A0J9YXQ4	647 aa		33.96	■■■■□ 3.03
CERS2-201	ENST00000271688	CIZ1	Q9ULV3	898 aa	Predicted RBP	33.95	■■■■□ 3.03
CERS2-201	ENST00000271688	USP54	Q70EL1	1684 aa		33.94	■■■■□ 3.02
CERS2-201	ENST00000271688	NBPF6	Q5VWK0	638 aa		33.94	■■■■□ 3.02
CERS2-201	ENST00000271688	NBPF4	Q96M43	638 aa		33.94	■■■■□ 3.02
CERS2-201	ENST00000271688	PDE1A	P54750	535 aa		33.94	■■■■□ 3.02

Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms