RNA–Protein interactions for RNA: ENST00000265735.11

SGCE-201, Transcript of sarcoglycan epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCE, Length 1,694 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-201ENST00000265735 SF3B2Q13435 895 aaKnown RBP17.07■□□□□ 0.32
SGCE-201ENST00000265735 DEFB132Q7Z7B7 95 aa17.07■□□□□ 0.32
SGCE-201ENST00000265735 MTHFSP49914 203 aa17.06■□□□□ 0.32
SGCE-201ENST00000265735 RAPGEF4Q8WZA2 1011 aa17.05■□□□□ 0.32
SGCE-201ENST00000265735 IGSF1Q8N6C5 1336 aa17.04■□□□□ 0.32
SGCE-201ENST00000265735 ZCRB1Q8TBF4 217 aaKnown RBP17.04■□□□□ 0.32
SGCE-201ENST00000265735 PKD1L3Q7Z443 1732 aa17.04■□□□□ 0.32
SGCE-201ENST00000265735 TATP17735 454 aaPredicted RBP17.04■□□□□ 0.32
SGCE-201ENST00000265735 BAG6P46379 1132 aa17.04■□□□□ 0.32
SGCE-201ENST00000265735 IL13P35225 146 aa17.03■□□□□ 0.32
SGCE-201ENST00000265735 BCL11BQ9C0K0 894 aaPredicted RBP17.02■□□□□ 0.32
SGCE-201ENST00000265735 PLEKHG2Q9H7P9 1386 aa17.02■□□□□ 0.31
SGCE-201ENST00000265735 NHSQ6T4R5 1651 aa17.02■□□□□ 0.31
SGCE-201ENST00000265735 APBA3O96018 575 aa17.01■□□□□ 0.31
SGCE-201ENST00000265735 PTF1AQ7RTS3 328 aa17.01■□□□□ 0.31
SGCE-201ENST00000265735 DDX54Q8TDD1 881 aaKnown RBP17.01■□□□□ 0.31
SGCE-201ENST00000265735 EN1Q05925 392 aaPredicted RBP17.01■□□□□ 0.31
SGCE-201ENST00000265735 CNGB1Q14028 1251 aaPredicted RBP17.01■□□□□ 0.31
SGCE-201ENST00000265735 CAMKK2Q96RR4 588 aa17■□□□□ 0.31
SGCE-201ENST00000265735 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17■□□□□ 0.312e-6■□□□□ 8.1
SGCE-201ENST00000265735 COL3A1P02461 1466 aaPredicted RBP17■□□□□ 0.31
SGCE-201ENST00000265735 RGPD3A6NKT7 1758 aaPredicted RBP16.99■□□□□ 0.31
SGCE-201ENST00000265735 RGPD4Q7Z3J3 1758 aa16.99■□□□□ 0.31
SGCE-201ENST00000265735 KDRP35968 1356 aa16.99■□□□□ 0.31
SGCE-201ENST00000265735 PARD3Q8TEW0 1356 aa16.99■□□□□ 0.31
SGCE-201ENST00000265735 KCNQ2O43526 872 aa16.98■□□□□ 0.31
SGCE-201ENST00000265735 PRKRIP1Q9H875 184 aaPredicted RBP16.98■□□□□ 0.31
SGCE-201ENST00000265735 PCDH11XQ9BZA7 1347 aa16.98■□□□□ 0.31
SGCE-201ENST00000265735 PCDH11YQ9BZA8 1340 aa16.98■□□□□ 0.31
SGCE-201ENST00000265735 PLSCR1O15162 318 aa16.97■□□□□ 0.31
SGCE-201ENST00000265735 CYP27B1O15528 508 aa16.97■□□□□ 0.31
SGCE-201ENST00000265735 PPP2R1AP30153 589 aa16.97■□□□□ 0.31
SGCE-201ENST00000265735 RREB1Q92766 1687 aa16.97■□□□□ 0.31
SGCE-201ENST00000265735 EZH2Q15910 746 aaKnown RBP16.97■□□□□ 0.31
SGCE-201ENST00000265735 DOT1LQ8TEK3 1739 aa16.96■□□□□ 0.31
SGCE-201ENST00000265735 DIAPH1O60610 1272 aaKnown RBP16.96■□□□□ 0.31
SGCE-201ENST00000265735 ACSBG1Q96GR2 724 aa16.96■□□□□ 0.31
SGCE-201ENST00000265735 SPG7Q9UQ90 795 aa16.96■□□□□ 0.31
SGCE-201ENST00000265735 BTAF1O14981 1849 aa16.95■□□□□ 0.3
SGCE-201ENST00000265735 SULT6B1Q6IMI4 303 aa16.95■□□□□ 0.3
SGCE-201ENST00000265735 AEBP1Q8IUX7 1158 aa16.95■□□□□ 0.3
SGCE-201ENST00000265735 KAT6BQ8WYB5 2073 aa16.95■□□□□ 0.3
SGCE-201ENST00000265735 NKX1-1Q15270 411 aaPredicted RBP16.94■□□□□ 0.3
SGCE-201ENST00000265735 NUP188Q5SRE5 1749 aa16.93■□□□□ 0.3
SGCE-201ENST00000265735 TOGARAM1Q9Y4F4 1720 aa16.92■□□□□ 0.3
SGCE-201ENST00000265735 PHKG2P15735 406 aa16.91■□□□□ 0.3
SGCE-201ENST00000265735 PRIM1P49642 420 aaKnown RBP16.91■□□□□ 0.3
SGCE-201ENST00000265735 PROM2Q8N271 834 aa16.91■□□□□ 0.3
SGCE-201ENST00000265735 AMOTQ4VCS5 1084 aa16.91■□□□□ 0.3
SGCE-201ENST00000265735 PLEKHO1Q53GL0 409 aaPredicted RBP16.91■□□□□ 0.3
SGCE-201ENST00000265735 IFNL2Q8IZJ0 200 aa16.91■□□□□ 0.3
SGCE-201ENST00000265735 CFAP53Q96M91 514 aa16.91■□□□□ 0.3
SGCE-201ENST00000265735 ITGB4P16144 1822 aa16.9■□□□□ 0.3
SGCE-201ENST00000265735 RALBP1Q15311 655 aa16.9■□□□□ 0.3
SGCE-201ENST00000265735 HMOX1P09601 288 aa16.89■□□□□ 0.29
SGCE-201ENST00000265735 GTF3C3Q9Y5Q9 886 aa16.89■□□□□ 0.29
SGCE-201ENST00000265735 TXNRD1Q16881 649 aa16.88■□□□□ 0.29
SGCE-201ENST00000265735 SYTL4Q96C24 671 aaPredicted RBP16.88■□□□□ 0.29
SGCE-201ENST00000265735 LY75O60449 1722 aa16.87■□□□□ 0.29
SGCE-201ENST00000265735 U2SURPO15042 1029 aaKnown RBP16.86■□□□□ 0.29
SGCE-201ENST00000265735 ZNF530Q6P9A1 599 aaPredicted RBP16.85■□□□□ 0.29
SGCE-201ENST00000265735 MRS2Q9HD23 443 aa16.85■□□□□ 0.29
SGCE-201ENST00000265735 NUDCQ9Y266 331 aa16.85■□□□□ 0.29
SGCE-201ENST00000265735 HSP90AB1P08238 724 aaKnown RBP16.85■□□□□ 0.29
SGCE-201ENST00000265735 DCAF5Q96JK2 942 aa16.85■□□□□ 0.29
SGCE-201ENST00000265735 KDM6AO15550 1401 aaPredicted RBP16.84■□□□□ 0.29
SGCE-201ENST00000265735 MPRIPQ6WCQ1 1025 aa16.83■□□□□ 0.28
SGCE-201ENST00000265735 RSPH6AQ9H0K4 717 aa16.83■□□□□ 0.28
SGCE-201ENST00000265735 PAPPAQ13219 1627 aa16.82■□□□□ 0.28
SGCE-201ENST00000265735 SCN11AQ9UI33 1791 aa16.82■□□□□ 0.28
SGCE-201ENST00000265735 ERVV-2B6SEH9 535 aa16.82■□□□□ 0.28
SGCE-201ENST00000265735 MTHFSDQ2M296 383 aaKnown RBP16.82■□□□□ 0.28
SGCE-201ENST00000265735 AKAP4Q5JQC9 854 aa16.82■□□□□ 0.28
SGCE-201ENST00000265735 C1orf141Q5JVX7 400 aa16.82■□□□□ 0.28
SGCE-201ENST00000265735 NBPF14Q5TI25 921 aa16.82■□□□□ 0.28
SGCE-201ENST00000265735 PIGBQ92521 554 aa16.82■□□□□ 0.28
SGCE-201ENST00000265735 MYBBP1AQ9BQG0 1328 aaKnown RBP16.82■□□□□ 0.28
SGCE-201ENST00000265735 SLC27A3Q5K4L6 730 aa16.81■□□□□ 0.28
SGCE-201ENST00000265735 LRRC4BQ9NT99 713 aa16.81■□□□□ 0.28
SGCE-201ENST00000265735 ADAMTS7Q9UKP4 1686 aa16.81■□□□□ 0.28
SGCE-201ENST00000265735 VIRMAQ69YN4 1812 aaKnown RBP16.81■□□□□ 0.28
SGCE-201ENST00000265735 FCHSD2O94868 740 aa16.81■□□□□ 0.28
SGCE-201ENST00000265735 U2AF1L5P0DN76 240 aaPredicted RBP16.81■□□□□ 0.28
SGCE-201ENST00000265735 U2AF1Q01081 240 aaKnown RBP eCLIP16.81■□□□□ 0.28
SGCE-201ENST00000265735 CCDC184Q52MB2 194 aa16.81■□□□□ 0.28
SGCE-201ENST00000265735 ANO8Q9HCE9 1232 aaPredicted RBP16.81■□□□□ 0.28
SGCE-201ENST00000265735 PSDA5PKW4 1024 aaPredicted RBP16.8■□□□□ 0.28
SGCE-201ENST00000265735 R3HDM1Q15032 1099 aaKnown RBP16.8■□□□□ 0.28
SGCE-201ENST00000265735 TMOD3Q9NYL9 352 aa16.8■□□□□ 0.28
SGCE-201ENST00000265735 PRKAR2BP31323 418 aa16.79■□□□□ 0.28
SGCE-201ENST00000265735 PHACTR3Q96KR7 559 aa16.78■□□□□ 0.28
SGCE-201ENST00000265735 PALLDQ8WX93 1383 aa16.78■□□□□ 0.28
SGCE-201ENST00000265735 SMARCC1Q92922 1105 aaPredicted RBP16.78■□□□□ 0.28
SGCE-201ENST00000265735 HNRNPUQ00839 825 aaKnown RBP eCLIP16.77■□□□□ 0.28
SGCE-201ENST00000265735 GAS2L2Q8NHY3 880 aa16.77■□□□□ 0.28
SGCE-201ENST00000265735 TAF1LQ8IZX4 1826 aa16.76■□□□□ 0.27
SGCE-201ENST00000265735 SLC15A2Q16348 729 aa16.76■□□□□ 0.27
SGCE-201ENST00000265735 LGR6Q9HBX8 967 aa16.76■□□□□ 0.27
SGCE-201ENST00000265735 ATG3Q9NT62 314 aa16.76■□□□□ 0.27
SGCE-201ENST00000265735 ASAP1Q9ULH1 1129 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms