RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 EIF4A2Q14240 407 aaKnown RBP24.05■■□□□ 1.44
CSPG5-201ENST00000264723 GDPD2Q9HCC8 539 aa24.05■■□□□ 1.44
CSPG5-201ENST00000264723 R3HCC1Q9Y3T6 440 aaKnown RBP24.05■■□□□ 1.44
CSPG5-201ENST00000264723 SDSP20132 328 aa24.04■■□□□ 1.44
CSPG5-201ENST00000264723 LRRCC1Q9C099 1032 aa24.04■■□□□ 1.44
CSPG5-201ENST00000264723 BTBD11A6QL63 1104 aa24.04■■□□□ 1.44
CSPG5-201ENST00000264723 CIZ1Q9ULV3 898 aaPredicted RBP24.04■■□□□ 1.44
CSPG5-201ENST00000264723 CCT4P50991 539 aaKnown RBP24.04■■□□□ 1.44
CSPG5-201ENST00000264723 NEUROD6Q96NK8 337 aa24.03■■□□□ 1.44
CSPG5-201ENST00000264723 RBM27Q9P2N5 1060 aaKnown RBP24.03■■□□□ 1.44
CSPG5-201ENST00000264723 CLASRPQ8N2M8 674 aaKnown RBP24.03■■□□□ 1.44
CSPG5-201ENST00000264723 SRGAP3O43295 1099 aa24.03■■□□□ 1.44
CSPG5-201ENST00000264723 KIAA2012Q0VF49 1180 aa24.03■■□□□ 1.44
CSPG5-201ENST00000264723 MYO5CQ9NQX4 1742 aa24.02■■□□□ 1.44
CSPG5-201ENST00000264723 DTNBO60941 627 aa24.02■■□□□ 1.44
CSPG5-201ENST00000264723 PREX2Q70Z35 1606 aa24.02■■□□□ 1.44
CSPG5-201ENST00000264723 BAG4O95429 457 aaKnown RBP24.01■■□□□ 1.43
CSPG5-201ENST00000264723 RBM10P98175 930 aaKnown RBP24.01■■□□□ 1.43
CSPG5-201ENST00000264723 SYCE3A1L190 88 aa24■■□□□ 1.43
CSPG5-201ENST00000264723 TATP17735 454 aaPredicted RBP24■■□□□ 1.43
CSPG5-201ENST00000264723 GTF2E1P29083 439 aaPredicted RBP24■■□□□ 1.43
CSPG5-201ENST00000264723 PLEKHF1Q96S99 279 aa24■■□□□ 1.43
CSPG5-201ENST00000264723 BCL11BQ9C0K0 894 aaPredicted RBP24■■□□□ 1.43
CSPG5-201ENST00000264723 FOSBP53539 338 aa24■■□□□ 1.43
CSPG5-201ENST00000264723 TTC22Q5TAA0 569 aa23.99■■□□□ 1.43
CSPG5-201ENST00000264723 FIBPO43427 364 aa23.99■■□□□ 1.43
CSPG5-201ENST00000264723 TOM1L2Q6ZVM7 507 aa23.99■■□□□ 1.43
CSPG5-201ENST00000264723 ZGPATQ8N5A5 531 aaKnown RBP23.99■■□□□ 1.43
CSPG5-201ENST00000264723 PRDM11Q9NQV5 511 aa23.99■■□□□ 1.43
CSPG5-201ENST00000264723 KCNA6P17658 529 aa23.99■■□□□ 1.43
CSPG5-201ENST00000264723 TOMM22Q9NS69 142 aa23.98■■□□□ 1.43
CSPG5-201ENST00000264723 ADCY10Q96PN6 1610 aa23.98■■□□□ 1.43
CSPG5-201ENST00000264723 PLEKHM2Q8IWE5 1019 aa23.98■■□□□ 1.43
CSPG5-201ENST00000264723 FAM177BA6PVY3 158 aa23.98■■□□□ 1.43
CSPG5-201ENST00000264723 TAF7Q15545 349 aaPredicted RBP23.98■■□□□ 1.43
CSPG5-201ENST00000264723 SMC3Q9UQE7 1217 aa23.97■■□□□ 1.43
CSPG5-201ENST00000264723 LRRFIP2Q9Y608 721 aaKnown RBP23.97■■□□□ 1.43
CSPG5-201ENST00000264723 CROCC2H7BZ55 1655 aa23.97■■□□□ 1.43
CSPG5-201ENST00000264723 RUFY2Q8WXA3 655 aa23.97■■□□□ 1.43
CSPG5-201ENST00000264723 CWC27Q6UX04 472 aaKnown RBP23.96■■□□□ 1.43
CSPG5-201ENST00000264723 CD2BP2O95400 341 aaKnown RBP23.96■■□□□ 1.43
CSPG5-201ENST00000264723 ZKSCAN1P17029 563 aaPredicted RBP23.96■■□□□ 1.43
CSPG5-201ENST00000264723 G2E3Q7L622 706 aa23.96■■□□□ 1.43
CSPG5-201ENST00000264723 CHAMP1Q96JM3 812 aa23.96■■□□□ 1.43
CSPG5-201ENST00000264723 HSP90AB4PQ58FF6 505 aa23.96■■□□□ 1.43
CSPG5-201ENST00000264723 CDC42BPBQ9Y5S2 1711 aa23.95■■□□□ 1.42
CSPG5-201ENST00000264723 PUS7Q96PZ0 661 aaKnown RBP23.95■■□□□ 1.42
CSPG5-201ENST00000264723 ABCC1P33527 1531 aa23.95■■□□□ 1.42
CSPG5-201ENST00000264723 ANTXR1Q9H6X2 564 aa23.95■■□□□ 1.42
CSPG5-201ENST00000264723 GNL2Q13823 731 aaKnown RBP23.94■■□□□ 1.42
CSPG5-201ENST00000264723 ARHGAP45Q92619 1136 aa23.94■■□□□ 1.42
CSPG5-201ENST00000264723 MX1P20591 662 aa23.94■■□□□ 1.42
CSPG5-201ENST00000264723 PTCD1O75127 700 aaKnown RBP23.93■■□□□ 1.42
CSPG5-201ENST00000264723 FLIIQ13045 1269 aa23.93■■□□□ 1.42
CSPG5-201ENST00000264723 IL13P35225 146 aa23.93■■□□□ 1.42
CSPG5-201ENST00000264723 PRKCSHP14314 528 aaPredicted RBP23.92■■□□□ 1.42
CSPG5-201ENST00000264723 CHRNA2Q15822 529 aa23.92■■□□□ 1.42
CSPG5-201ENST00000264723 CABP4P57796 275 aa23.92■■□□□ 1.42
CSPG5-201ENST00000264723 MTHFSDQ2M296 383 aaKnown RBP23.92■■□□□ 1.42
CSPG5-201ENST00000264723 ANKRD44Q8N8A2 993 aa23.92■■□□□ 1.42
CSPG5-201ENST00000264723 KCNH5Q8NCM2 988 aa23.92■■□□□ 1.42
CSPG5-201ENST00000264723 KDM5AP29375 1690 aaKnown RBP23.92■■□□□ 1.42
CSPG5-201ENST00000264723 SYNMO15061 1565 aa23.92■■□□□ 1.42
CSPG5-201ENST00000264723 TRPM2O94759 1503 aa23.91■■□□□ 1.42
CSPG5-201ENST00000264723 CCDC173Q0VFZ6 552 aa23.91■■□□□ 1.42
CSPG5-201ENST00000264723 FSD1Q9BTV5 496 aa23.91■■□□□ 1.42
CSPG5-201ENST00000264723 DCTPP1Q9H773 170 aa23.91■■□□□ 1.42
CSPG5-201ENST00000264723 ZCCHC11Q5TAX3 1644 aaKnown RBP23.91■■□□□ 1.42
CSPG5-201ENST00000264723 MAP3K19Q56UN5 1328 aa23.91■■□□□ 1.42
CSPG5-201ENST00000264723 LTKP29376 864 aa23.9■■□□□ 1.42
CSPG5-201ENST00000264723 CEP85Q6P2H3 762 aa23.9■■□□□ 1.42
CSPG5-201ENST00000264723 LRRC59Q96AG4 307 aaKnown RBP23.9■■□□□ 1.42
CSPG5-201ENST00000264723 CCDC85AQ96PX6 553 aaPredicted RBP23.9■■□□□ 1.42
CSPG5-201ENST00000264723 CWC22Q9HCG8 908 aaKnown RBP23.9■■□□□ 1.42
CSPG5-201ENST00000264723 SNX21Q969T3 373 aa23.89■■□□□ 1.42
CSPG5-201ENST00000264723 DNAJC2Q99543 621 aaKnown RBP23.89■■□□□ 1.42
CSPG5-201ENST00000264723 PHF14O94880 888 aa23.89■■□□□ 1.42
CSPG5-201ENST00000264723 RBM25P49756 843 aaKnown RBP23.89■■□□□ 1.42
CSPG5-201ENST00000264723 RAB3GAP1Q15042 981 aa23.89■■□□□ 1.41
CSPG5-201ENST00000264723 FBXW7Q969H0 707 aa23.89■■□□□ 1.41
CSPG5-201ENST00000264723 EYA1Q99502 592 aa23.89■■□□□ 1.41
CSPG5-201ENST00000264723 CNTROBQ8N137 903 aa23.88■■□□□ 1.41
CSPG5-201ENST00000264723 KRT28Q7Z3Y7 464 aa23.88■■□□□ 1.41
CSPG5-201ENST00000264723 SPG7Q9UQ90 795 aa23.88■■□□□ 1.41
CSPG5-201ENST00000264723 CLTCL1P53675 1640 aa23.87■■□□□ 1.41
CSPG5-201ENST00000264723 SBNO2Q9Y2G9 1366 aa23.87■■□□□ 1.41
CSPG5-201ENST00000264723 PDE1AP54750 535 aa23.87■■□□□ 1.41
CSPG5-201ENST00000264723 GSPT1P15170 499 aaKnown RBP23.87■■□□□ 1.41
CSPG5-201ENST00000264723 IQGAP3Q86VI3 1631 aa23.86■■□□□ 1.41
CSPG5-201ENST00000264723 STK3Q13188 491 aa23.86■■□□□ 1.41
CSPG5-201ENST00000264723 PKP1Q13835 747 aa23.86■■□□□ 1.41
CSPG5-201ENST00000264723 APPP05067 770 aa23.86■■□□□ 1.41
CSPG5-201ENST00000264723 SIRT2Q8IXJ6 389 aa23.85■■□□□ 1.41
CSPG5-201ENST00000264723 PI4KAP2A4QPH2 592 aa23.85■■□□□ 1.41
CSPG5-201ENST00000264723 CHAF1AQ13111 956 aaPredicted RBP23.85■■□□□ 1.41
CSPG5-201ENST00000264723 FERMT3Q86UX7 667 aa23.85■■□□□ 1.41
CSPG5-201ENST00000264723 PI4KAP1Q8N8J0 262 aa23.85■■□□□ 1.41
CSPG5-201ENST00000264723 JARID2Q92833 1246 aaPredicted RBP23.85■■□□□ 1.41
CSPG5-201ENST00000264723 ISY1Q9ULR0 285 aaKnown RBP23.85■■□□□ 1.41
CSPG5-201ENST00000264723 GAS2L3Q86XJ1 694 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms