RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 METTL24Q5JXM2 366 aa16.74■□□□□ 0.27
CDH1-201ENST00000261769 RPGRQ92834 1020 aaKnown RBP16.74■□□□□ 0.27
CDH1-201ENST00000261769 AACSQ86V21 672 aa16.73■□□□□ 0.27
CDH1-201ENST00000261769 MYD88Q99836 296 aa16.73■□□□□ 0.27
CDH1-201ENST00000261769 CAVIN4Q5BKX8 364 aa16.73■□□□□ 0.27
CDH1-201ENST00000261769 CEP89Q96ST8 783 aa16.73■□□□□ 0.27
CDH1-201ENST00000261769 SNRPA1P09661 255 aaKnown RBP16.73■□□□□ 0.27
CDH1-201ENST00000261769 FKBP4Q02790 459 aaKnown RBP eCLIP16.72■□□□□ 0.27
CDH1-201ENST00000261769 RAI14Q9P0K7 980 aa16.72■□□□□ 0.27
CDH1-201ENST00000261769 RFC4P35249 363 aa16.72■□□□□ 0.27
CDH1-201ENST00000261769 IFIT5Q13325 482 aaKnown RBP16.72■□□□□ 0.27
CDH1-201ENST00000261769 C22orf23Q9BZE7 217 aa16.72■□□□□ 0.27
CDH1-201ENST00000261769 LRP2BPQ9P2M1 347 aa16.72■□□□□ 0.27
CDH1-201ENST00000261769 MTMR7Q9Y216 660 aa16.72■□□□□ 0.27
CDH1-201ENST00000261769 RRP12Q5JTH9 1297 aaKnown RBP16.72■□□□□ 0.27
CDH1-201ENST00000261769 CCDC85AQ96PX6 553 aaPredicted RBP16.72■□□□□ 0.27
CDH1-201ENST00000261769 VPS37CA5D8V6 355 aaPredicted RBP16.71■□□□□ 0.27
CDH1-201ENST00000261769 PES1O00541 588 aaKnown RBP16.71■□□□□ 0.27
CDH1-201ENST00000261769 ZSCAN29Q8IWY8 852 aaPredicted RBP16.71■□□□□ 0.27
CDH1-201ENST00000261769 DNAAF4Q8WXU2 420 aa16.71■□□□□ 0.27
CDH1-201ENST00000261769 DISP3Q9P2K9 1392 aa16.71■□□□□ 0.27
CDH1-201ENST00000261769 C11orf95C9JLR9 678 aaPredicted RBP16.71■□□□□ 0.27
CDH1-201ENST00000261769 IL2RBP14784 551 aa16.71■□□□□ 0.27
CDH1-201ENST00000261769 HSP90AB2PQ58FF8 381 aa16.71■□□□□ 0.27
CDH1-201ENST00000261769 PDZRN3Q9UPQ7 1066 aa16.71■□□□□ 0.27
CDH1-201ENST00000261769 TSR1Q2NL82 804 aaKnown RBP16.7■□□□□ 0.26
CDH1-201ENST00000261769 PPP1R42Q7Z4L9 355 aa16.7■□□□□ 0.26
CDH1-201ENST00000261769 PRAG1Q86YV5 1406 aa16.7■□□□□ 0.26
CDH1-201ENST00000261769 GCP02774 474 aa16.7■□□□□ 0.26
CDH1-201ENST00000261769 CTNNA3Q9UI47 895 aa16.7■□□□□ 0.26
CDH1-201ENST00000261769 ZFYVE16Q7Z3T8 1539 aa16.69■□□□□ 0.26
CDH1-201ENST00000261769 BECN2A8MW95 431 aa16.69■□□□□ 0.26
CDH1-201ENST00000261769 ATP2B2Q01814 1243 aa16.69■□□□□ 0.26
CDH1-201ENST00000261769 ANKIB1Q9P2G1 1089 aa16.69■□□□□ 0.26
CDH1-201ENST00000261769 SKOR2Q2VWA4 1001 aaPredicted RBP16.69■□□□□ 0.26
CDH1-201ENST00000261769 CDCA7Q9BWT1 371 aaPredicted RBP16.69■□□□□ 0.26
CDH1-201ENST00000261769 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.69■□□□□ 0.26
CDH1-201ENST00000261769 RALGAPBQ86X10 1494 aa16.68■□□□□ 0.26
CDH1-201ENST00000261769 NUCB2P80303 420 aa16.68■□□□□ 0.26
CDH1-201ENST00000261769 DDX49Q9Y6V7 483 aaKnown RBP16.68■□□□□ 0.26
CDH1-201ENST00000261769 MCM2P49736 904 aa16.68■□□□□ 0.26
CDH1-201ENST00000261769 FOXD4L6Q3SYB3 417 aaPredicted RBP16.68■□□□□ 0.26
CDH1-201ENST00000261769 FOXD4L3Q6VB84 417 aaPredicted RBP16.68■□□□□ 0.26
CDH1-201ENST00000261769 ANKRD20A12PQ8NF67 263 aa16.68■□□□□ 0.26
CDH1-201ENST00000261769 CABLES1Q8TDN4 633 aa16.68■□□□□ 0.26
CDH1-201ENST00000261769 KIF1BPQ96EK5 621 aa16.68■□□□□ 0.26
CDH1-201ENST00000261769 YTHDC2Q9H6S0 1430 aaKnown RBP16.68■□□□□ 0.26
CDH1-201ENST00000261769 TARBP1Q13395 1621 aaKnown RBP16.68■□□□□ 0.26
CDH1-201ENST00000261769 ANKRD18BA2A2Z9 1011 aa16.68■□□□□ 0.26
CDH1-201ENST00000261769 GOLGA6L19H0YKK7 550 aa16.68■□□□□ 0.26
CDH1-201ENST00000261769 GLIPR1L2Q4G1C9 344 aa16.68■□□□□ 0.26
CDH1-201ENST00000261769 FLT4P35916 1363 aa16.68■□□□□ 0.26
CDH1-201ENST00000261769 CDC5LQ99459 802 aaKnown RBP16.67■□□□□ 0.26
CDH1-201ENST00000261769 RAB11FIP3O75154 756 aa16.67■□□□□ 0.26
CDH1-201ENST00000261769 TPM1P09493 284 aa16.67■□□□□ 0.26
CDH1-201ENST00000261769 BICD2Q8TD16 824 aa16.67■□□□□ 0.26
CDH1-201ENST00000261769 ZBTB3Q9H5J0 574 aa16.67■□□□□ 0.26
CDH1-201ENST00000261769 ABCF2Q9UG63 623 aa16.67■□□□□ 0.26
CDH1-201ENST00000261769 NPATQ14207 1427 aa16.66■□□□□ 0.26
CDH1-201ENST00000261769 AKAP4Q5JQC9 854 aa16.66■□□□□ 0.26
CDH1-201ENST00000261769 WDHD1O75717 1129 aaPredicted RBP16.66■□□□□ 0.26
CDH1-201ENST00000261769 NBPF14Q5TI25 921 aa16.66■□□□□ 0.26
CDH1-201ENST00000261769 ZNF287Q9HBT7 754 aa16.66■□□□□ 0.26
CDH1-201ENST00000261769 IDH1O75874 414 aaKnown RBP16.66■□□□□ 0.26
CDH1-201ENST00000261769 TPM3P06753 285 aa16.66■□□□□ 0.26
CDH1-201ENST00000261769 PDCP20941 246 aa16.66■□□□□ 0.26
CDH1-201ENST00000261769 PTPRCP08575 1304 aa16.66■□□□□ 0.26
CDH1-201ENST00000261769 TDO2P48775 406 aa16.65■□□□□ 0.26
CDH1-201ENST00000261769 DDX46Q7L014 1031 aaKnown RBP16.65■□□□□ 0.26
CDH1-201ENST00000261769 SSH1Q8WYL5 1049 aa16.65■□□□□ 0.26
CDH1-201ENST00000261769 GOLGA6L3A6NEY3 463 aa16.65■□□□□ 0.26
CDH1-201ENST00000261769 TMEM57Q8N5G2 664 aa16.65■□□□□ 0.26
CDH1-201ENST00000261769 GPTP24298 496 aa16.65■□□□□ 0.26
CDH1-201ENST00000261769 FLIIQ13045 1269 aa16.65■□□□□ 0.26
CDH1-201ENST00000261769 IL16Q14005 1332 aa16.65■□□□□ 0.26
CDH1-201ENST00000261769 FANCIQ9NVI1 1328 aa16.65■□□□□ 0.26
CDH1-201ENST00000261769 SLC5A1P13866 664 aa16.64■□□□□ 0.26
CDH1-201ENST00000261769 CWC25Q9NXE8 425 aaPredicted RBP16.64■□□□□ 0.26
CDH1-201ENST00000261769 SLC4A3P48751 1232 aa16.64■□□□□ 0.25
CDH1-201ENST00000261769 CCDC73Q6ZRK6 1079 aa16.64■□□□□ 0.25
CDH1-201ENST00000261769 SLF2Q8IX21 1173 aa16.64■□□□□ 0.25
CDH1-201ENST00000261769 CHMP5Q9NZZ3 219 aa16.64■□□□□ 0.25
CDH1-201ENST00000261769 TMEM2Q9UHN6 1383 aa16.64■□□□□ 0.25
CDH1-201ENST00000261769 ST5P78524 1137 aa16.64■□□□□ 0.25
CDH1-201ENST00000261769 IL1RAPL2Q9NP60 686 aa16.64■□□□□ 0.25
CDH1-201ENST00000261769 MAPKBP1O60336 1514 aa16.64■□□□□ 0.25
CDH1-201ENST00000261769 CCDC184Q52MB2 194 aa16.64■□□□□ 0.25
CDH1-201ENST00000261769 CFAP74Q9C0B2 1584 aa16.64■□□□□ 0.25
CDH1-201ENST00000261769 ANKRD1Q15327 319 aa16.63■□□□□ 0.25
CDH1-201ENST00000261769 TRIM22Q8IYM9 498 aa16.63■□□□□ 0.25
CDH1-201ENST00000261769 CFAP43Q8NDM7 1665 aa16.63■□□□□ 0.25
CDH1-201ENST00000261769 ATP6V1AP38606 617 aa16.63■□□□□ 0.25
CDH1-201ENST00000261769 AMER1Q5JTC6 1135 aaPredicted RBP16.63■□□□□ 0.25
CDH1-201ENST00000261769 CHD1LQ86WJ1 897 aa16.63■□□□□ 0.25
CDH1-201ENST00000261769 SLAIN2Q9P270 581 aa16.63■□□□□ 0.25
CDH1-201ENST00000261769 EIF2AK4Q9P2K8 1649 aaKnown RBP16.63■□□□□ 0.25
CDH1-201ENST00000261769 AIDAQ96BJ3 306 aa16.63■□□□□ 0.25
CDH1-201ENST00000261769 ACSBG1Q96GR2 724 aa16.63■□□□□ 0.25
CDH1-201ENST00000261769 R3HCC1Q9Y3T6 440 aaKnown RBP16.63■□□□□ 0.25
CDH1-201ENST00000261769 C6orf229H3BNL8 230 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms