RNA–Protein interactions for RNA: ENST00000258104.7

DYSF-201, Transcript of dysferlin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DYSF, Length 6,796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DYSF-201ENST00000258104 MCM4P33991 863 aa17.61■□□□□ 0.41
DYSF-201ENST00000258104 MPHOSPH10O00566 681 aaKnown RBP17.61■□□□□ 0.41
DYSF-201ENST00000258104 GIMAP7Q8NHV1 300 aa17.61■□□□□ 0.41
DYSF-201ENST00000258104 UBXN4Q92575 508 aa17.61■□□□□ 0.41
DYSF-201ENST00000258104 CCDC83Q8IWF9 413 aa17.61■□□□□ 0.41
DYSF-201ENST00000258104 GUCY1B3Q02153 619 aa17.61■□□□□ 0.41
DYSF-201ENST00000258104 JAKMIP3Q5VZ66 844 aa17.61■□□□□ 0.41
DYSF-201ENST00000258104 RAI14Q9P0K7 980 aa17.61■□□□□ 0.41
DYSF-201ENST00000258104 INCENPQ9NQS7 918 aa17.61■□□□□ 0.41
DYSF-201ENST00000258104 SMARCA5O60264 1052 aaPredicted RBP17.6■□□□□ 0.41
DYSF-201ENST00000258104 CCDC57Q2TAC2 916 aa17.6■□□□□ 0.41
DYSF-201ENST00000258104 TXLNBQ8N3L3 684 aa17.6■□□□□ 0.41
DYSF-201ENST00000258104 CHMP4BP1P59074 171 aa17.6■□□□□ 0.41
DYSF-201ENST00000258104 CCDC178Q5BJE1 867 aa17.6■□□□□ 0.41
DYSF-201ENST00000258104 TNNT1P13805 278 aa17.6■□□□□ 0.41
DYSF-201ENST00000258104 UBAC1Q9BSL1 405 aa17.6■□□□□ 0.41
DYSF-201ENST00000258104 TRMT1Q9NXH9 659 aaKnown RBP17.6■□□□□ 0.41
DYSF-201ENST00000258104 SRGAP3O43295 1099 aa17.6■□□□□ 0.41
DYSF-201ENST00000258104 CFAP70Q5T0N1 1121 aa17.6■□□□□ 0.41
DYSF-201ENST00000258104 MPHOSPH8Q99549 860 aa17.6■□□□□ 0.41
DYSF-201ENST00000258104 LARP6Q9BRS8 491 aaKnown RBP17.6■□□□□ 0.41
DYSF-201ENST00000258104 MAP3K11Q16584 847 aa17.59■□□□□ 0.41
DYSF-201ENST00000258104 SMTNL1A8MU46 457 aa17.59■□□□□ 0.41
DYSF-201ENST00000258104 CCT4P50991 539 aaKnown RBP17.59■□□□□ 0.41
DYSF-201ENST00000258104 XPCQ01831 940 aaPredicted RBP17.59■□□□□ 0.41
DYSF-201ENST00000258104 BICDL1Q6ZP65 573 aa17.59■□□□□ 0.41
DYSF-201ENST00000258104 CRACR2AQ9BSW2 395 aa17.59■□□□□ 0.41
DYSF-201ENST00000258104 MVPQ14764 893 aaKnown RBP17.59■□□□□ 0.41
DYSF-201ENST00000258104 RNF187Q5TA31 235 aaPredicted RBP17.58■□□□□ 0.41
DYSF-201ENST00000258104 SMG6Q86US8 1419 aaKnown RBP17.58■□□□□ 0.41
DYSF-201ENST00000258104 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.58■□□□□ 0.41
DYSF-201ENST00000258104 PRAM1Q96QH2 718 aa17.58■□□□□ 0.4
DYSF-201ENST00000258104 URI1O94763 535 aaPredicted RBP17.58■□□□□ 0.4
DYSF-201ENST00000258104 UBE4AQ14139 1066 aa17.58■□□□□ 0.4
DYSF-201ENST00000258104 MIS18AQ9NYP9 233 aa17.58■□□□□ 0.4
DYSF-201ENST00000258104 NF2P35240 595 aa17.57■□□□□ 0.4
DYSF-201ENST00000258104 PTPN14Q15678 1187 aa17.57■□□□□ 0.4
DYSF-201ENST00000258104 ZNF397Q8NF99 534 aaPredicted RBP17.57■□□□□ 0.4
DYSF-201ENST00000258104 GPATCH11Q8N954 259 aa17.57■□□□□ 0.4
DYSF-201ENST00000258104 SRCIN1Q9C0H9 1055 aa17.57■□□□□ 0.4
DYSF-201ENST00000258104 BMP2KQ9NSY1 1161 aaPredicted RBP17.57■□□□□ 0.4
DYSF-201ENST00000258104 USP8P40818 1118 aa17.57■□□□□ 0.4
DYSF-201ENST00000258104 PDE3AQ14432 1141 aa17.57■□□□□ 0.4
DYSF-201ENST00000258104 CPLX3Q8WVH0 158 aa17.57■□□□□ 0.4
DYSF-201ENST00000258104 SHTN1A0MZ66 631 aa17.57■□□□□ 0.4
DYSF-201ENST00000258104 RRP9O43818 475 aaKnown RBP17.57■□□□□ 0.4
DYSF-201ENST00000258104 IDH1O75874 414 aaKnown RBP17.57■□□□□ 0.4
DYSF-201ENST00000258104 SMARCA2P51531 1590 aa17.56■□□□□ 0.4
DYSF-201ENST00000258104 UBA5Q9GZZ9 404 aa17.56■□□□□ 0.4
DYSF-201ENST00000258104 NUTM2BA6NNL0 878 aaPredicted RBP17.56■□□□□ 0.4
DYSF-201ENST00000258104 NUTM2EB1AL46 878 aaPredicted RBP17.56■□□□□ 0.4
DYSF-201ENST00000258104 NUTM2AQ8IVF1 878 aaPredicted RBP17.56■□□□□ 0.4
DYSF-201ENST00000258104 PTPRGP23470 1445 aa17.56■□□□□ 0.4
DYSF-201ENST00000258104 TATP17735 454 aaPredicted RBP17.56■□□□□ 0.4
DYSF-201ENST00000258104 TXNDC2Q86VQ3 553 aa17.56■□□□□ 0.4
DYSF-201ENST00000258104 CDKL5O76039 1030 aa17.56■□□□□ 0.4
DYSF-201ENST00000258104 ATF7IPQ6VMQ6 1270 aa17.56■□□□□ 0.4
DYSF-201ENST00000258104 CTNNBL1Q8WYA6 563 aaPredicted RBP17.55■□□□□ 0.4
DYSF-201ENST00000258104 SLC26A8Q96RN1 970 aa17.55■□□□□ 0.4
DYSF-201ENST00000258104 LRP2BPQ9P2M1 347 aa17.55■□□□□ 0.4
DYSF-201ENST00000258104 SPDYE4A6NLX3 237 aa17.55■□□□□ 0.4
DYSF-201ENST00000258104 RRS1Q15050 365 aaKnown RBP17.55■□□□□ 0.4
DYSF-201ENST00000258104 SLC12A5Q9H2X9 1139 aa17.55■□□□□ 0.4
DYSF-201ENST00000258104 NBPF1Q3BBV0 1214 aa17.55■□□□□ 0.4
DYSF-201ENST00000258104 GPRASP1Q5JY77 1395 aa17.55■□□□□ 0.4
DYSF-201ENST00000258104 CCDC91Q7Z6B0 441 aa17.55■□□□□ 0.4
DYSF-201ENST00000258104 CCDC82Q8N4S0 544 aa17.55■□□□□ 0.4
DYSF-201ENST00000258104 SPA17Q15506 151 aa17.54■□□□□ 0.4
DYSF-201ENST00000258104 EXOC6BQ9Y2D4 811 aa17.54■□□□□ 0.4
DYSF-201ENST00000258104 BTBD11A6QL63 1104 aa17.54■□□□□ 0.4
DYSF-201ENST00000258104 SRRTQ9BXP5 876 aaKnown RBP17.54■□□□□ 0.4
DYSF-201ENST00000258104 IFFO1Q0D2I5 559 aa17.54■□□□□ 0.4
DYSF-201ENST00000258104 ZSCAN25Q6NSZ9 544 aa17.54■□□□□ 0.4
DYSF-201ENST00000258104 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.53■□□□□ 0.4
DYSF-201ENST00000258104 KIF4BQ2VIQ3 1234 aa17.53■□□□□ 0.4
DYSF-201ENST00000258104 ANAPC15P60006 121 aa17.53■□□□□ 0.4
DYSF-201ENST00000258104 TOM1L2Q6ZVM7 507 aa17.53■□□□□ 0.4
DYSF-201ENST00000258104 CDK19Q9BWU1 502 aa17.53■□□□□ 0.4
DYSF-201ENST00000258104 PPP6R1Q9UPN7 881 aa17.53■□□□□ 0.4
DYSF-201ENST00000258104 ZNF530Q6P9A1 599 aaPredicted RBP17.53■□□□□ 0.4
DYSF-201ENST00000258104 IPO4Q8TEX9 1081 aaKnown RBP17.53■□□□□ 0.4
DYSF-201ENST00000258104 CLIP2Q9UDT6 1046 aa17.53■□□□□ 0.4
DYSF-201ENST00000258104 PRPF40BQ6NWY9 871 aaKnown RBP17.52■□□□□ 0.4
DYSF-201ENST00000258104 CKAP2LQ8IYA6 745 aa17.52■□□□□ 0.4
DYSF-201ENST00000258104 ZSCAN31Q96LW9 406 aaPredicted RBP17.52■□□□□ 0.4
DYSF-201ENST00000258104 ISM2Q6H9L7 571 aa17.52■□□□□ 0.4
DYSF-201ENST00000258104 C16orf45Q96MC5 204 aaPredicted RBP17.52■□□□□ 0.4
DYSF-201ENST00000258104 ABCF2Q9UG63 623 aa17.52■□□□□ 0.4
DYSF-201ENST00000258104 SERPINA10Q9UK55 444 aa17.52■□□□□ 0.4
DYSF-201ENST00000258104 MACROD2A1Z1Q3 448 aa17.52■□□□□ 0.39
DYSF-201ENST00000258104 MINDY4BA8MYZ0 360 aa17.52■□□□□ 0.39
DYSF-201ENST00000258104 KIF5CO60282 957 aa17.52■□□□□ 0.39
DYSF-201ENST00000258104 ZSCAN30Q86W11 494 aa17.52■□□□□ 0.39
DYSF-201ENST00000258104 TMEM57Q8N5G2 664 aa17.52■□□□□ 0.39
DYSF-201ENST00000258104 CGNQ9P2M7 1197 aaKnown RBP17.52■□□□□ 0.39
DYSF-201ENST00000258104 ZHX1Q9UKY1 873 aaPredicted RBP17.52■□□□□ 0.39
DYSF-201ENST00000258104 CACNA2D4Q7Z3S7 1137 aa17.51■□□□□ 0.39
DYSF-201ENST00000258104 ZBTB9Q96C00 473 aa17.51■□□□□ 0.39
DYSF-201ENST00000258104 CCDC184Q52MB2 194 aa17.51■□□□□ 0.39
DYSF-201ENST00000258104 IMMTQ16891 758 aaKnown RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms